RNA–Protein interactions for RNA: ENST00000549268.1

USP15-213, Transcript of ubiquitin specific peptidase 15, humanhuman

TSL 5

Gene USP15, Length 1,087 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP15-213ENST00000549268 GUCA2AQ02747 115 aa11.22□□□□□ -0.61
USP15-213ENST00000549268 SPTLC1O15269 473 aa11.21□□□□□ -0.61
USP15-213ENST00000549268 NDUFV2P19404 249 aa11.21□□□□□ -0.61
USP15-213ENST00000549268 RSBN1LQ6PCB5 846 aaPredicted RBP11.21□□□□□ -0.61
USP15-213ENST00000549268 GPBP1L1Q9HC44 474 aaPredicted RBP11.21□□□□□ -0.61
USP15-213ENST00000549268 MMP16P51512 607 aa11.2□□□□□ -0.62
USP15-213ENST00000549268 RETREG3Q86VR2 466 aa11.2□□□□□ -0.62
USP15-213ENST00000549268 DDRGK1Q96HY6 314 aa11.2□□□□□ -0.62
USP15-213ENST00000549268 RSPH6AQ9H0K4 717 aa11.2□□□□□ -0.62
USP15-213ENST00000549268 TUSC1Q2TAM9 212 aa11.19□□□□□ -0.62
USP15-213ENST00000549268 MYSM1Q5VVJ2 828 aa11.19□□□□□ -0.62
USP15-213ENST00000549268 PRKD2Q9BZL6 878 aa11.19□□□□□ -0.62
USP15-213ENST00000549268 SPDYE5A6NIY4 337 aa11.18□□□□□ -0.62
USP15-213ENST00000549268 PPEF1O14829 653 aaPredicted RBP11.17□□□□□ -0.62
USP15-213ENST00000549268 DXOO77932 396 aaKnown RBP11.17□□□□□ -0.62
USP15-213ENST00000549268 BRPF1P55201 1214 aaPredicted RBP11.17□□□□□ -0.62
USP15-213ENST00000549268 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
USP15-213ENST00000549268 PRPF38BQ5VTL8 546 aaKnown RBP11.16□□□□□ -0.62
USP15-213ENST00000549268 PRDM9Q9NQV7 894 aa11.16□□□□□ -0.62
USP15-213ENST00000549268 C6orf229H3BNL8 230 aa11.15□□□□□ -0.62
USP15-213ENST00000549268 MTMR2Q13614 643 aa11.15□□□□□ -0.62
USP15-213ENST00000549268 SYMPKQ92797 1274 aaKnown RBP11.15□□□□□ -0.62
USP15-213ENST00000549268 FAM117AQ9C073 453 aa11.15□□□□□ -0.62
USP15-213ENST00000549268 SLC19A1P41440 591 aa11.13□□□□□ -0.63
USP15-213ENST00000549268 EMID1Q96A84 441 aaPredicted RBP11.13□□□□□ -0.63
USP15-213ENST00000549268 FCF1Q9Y324 198 aaKnown RBP11.13□□□□□ -0.63
USP15-213ENST00000549268 PCDHB15Q9Y5E8 787 aa11.13□□□□□ -0.63
USP15-213ENST00000549268 JUNDP17535 347 aa11.12□□□□□ -0.63
USP15-213ENST00000549268 DESI1Q6ICB0 168 aa11.12□□□□□ -0.63
USP15-213ENST00000549268 ZBTB3Q9H5J0 574 aa11.12□□□□□ -0.63
USP15-213ENST00000549268 PLEKHG3A1L390 1219 aa11.11□□□□□ -0.63
USP15-213ENST00000549268 RPIAP49247 311 aa11.11□□□□□ -0.63
USP15-213ENST00000549268 SH3D19Q5HYK7 790 aa11.11□□□□□ -0.63
USP15-213ENST00000549268 PLA2G2CQ5R387 149 aa11.11□□□□□ -0.63
USP15-213ENST00000549268 LIMD1Q9UGP4 676 aa11.11□□□□□ -0.63
USP15-213ENST00000549268 HRCP23327 699 aa11.1□□□□□ -0.63
USP15-213ENST00000549268 CLK2P49760 499 aaKnown RBP11.1□□□□□ -0.63
USP15-213ENST00000549268 SKIV2LQ15477 1246 aaKnown RBP11.1□□□□□ -0.63
USP15-213ENST00000549268 LIAT1Q6ZQX7 453 aa11.1□□□□□ -0.63
USP15-213ENST00000549268 SPRYD7Q5W111 196 aa11.09□□□□□ -0.63
USP15-213ENST00000549268 LILRB3O75022 631 aa11.08□□□□□ -0.64
USP15-213ENST00000549268 PRR7Q8TB68 274 aa11.08□□□□□ -0.64
USP15-213ENST00000549268 GOPCQ9HD26 462 aa11.08□□□□□ -0.64
USP15-213ENST00000549268 ZNF598Q86UK7 904 aaKnown RBP11.07□□□□□ -0.64
USP15-213ENST00000549268 IRX2Q9BZI1 471 aaPredicted RBP11.06□□□□□ -0.64
USP15-213ENST00000549268 POLR3EQ9NVU0 708 aa11.06□□□□□ -0.64
USP15-213ENST00000549268 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
USP15-213ENST00000549268 PTPRNQ16849 979 aa11.05□□□□□ -0.64
USP15-213ENST00000549268 LAPTM4AQ15012 233 aa11.04□□□□□ -0.64
USP15-213ENST00000549268 QPCTQ16769 361 aa11.04□□□□□ -0.64
USP15-213ENST00000549268 CABLES1Q8TDN4 633 aa11.04□□□□□ -0.64
USP15-213ENST00000549268 NUDT12Q9BQG2 462 aa11.04□□□□□ -0.64
USP15-213ENST00000549268 CFAP99D6REC4 459 aa11.03□□□□□ -0.64
USP15-213ENST00000549268 ZBTB24O43167 697 aaPredicted RBP11.03□□□□□ -0.64
USP15-213ENST00000549268 CSPP1Q1MSJ5 1256 aa11.03□□□□□ -0.64
USP15-213ENST00000549268 TMEM132AQ24JP5 1023 aa11.03□□□□□ -0.64
USP15-213ENST00000549268 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
USP15-213ENST00000549268 NUTM2BA6NNL0 878 aaPredicted RBP11.02□□□□□ -0.65
USP15-213ENST00000549268 NUTM2EB1AL46 878 aaPredicted RBP11.02□□□□□ -0.65
USP15-213ENST00000549268 CCNYL3P0C7X3 344 aa11.02□□□□□ -0.65
USP15-213ENST00000549268 NUTM2DQ5VT03 806 aaPredicted RBP11.02□□□□□ -0.65
USP15-213ENST00000549268 LYPD8Q6UX82 237 aa11.02□□□□□ -0.65
USP15-213ENST00000549268 NUTM2AQ8IVF1 878 aaPredicted RBP11.02□□□□□ -0.65
USP15-213ENST00000549268 IL27Q8NEV9 243 aa11.02□□□□□ -0.65
USP15-213ENST00000549268 ZNF697Q5TEC3 545 aa11.01□□□□□ -0.65
USP15-213ENST00000549268 EVA1BQ9NVM1 165 aa11.01□□□□□ -0.65
USP15-213ENST00000549268 PPP2R2DQ66LE6 453 aa11□□□□□ -0.65
USP15-213ENST00000549268 CCDC24Q8N4L8 307 aa11□□□□□ -0.65
USP15-213ENST00000549268 PRR20EP86478 221 aa10.99□□□□□ -0.65
USP15-213ENST00000549268 PRR20CP86479 221 aa10.99□□□□□ -0.65
USP15-213ENST00000549268 PRR20DP86480 221 aa10.99□□□□□ -0.65
USP15-213ENST00000549268 PRR20BP86481 221 aa10.99□□□□□ -0.65
USP15-213ENST00000549268 PRR20AP86496 221 aa10.99□□□□□ -0.65
USP15-213ENST00000549268 RTL5Q5HYW3 569 aaPredicted RBP10.99□□□□□ -0.65
USP15-213ENST00000549268 PROCA1Q8NCQ7 364 aaPredicted RBP10.99□□□□□ -0.65
USP15-213ENST00000549268 TRIM32Q13049 653 aa10.98□□□□□ -0.65
USP15-213ENST00000549268 TRIM67Q6ZTA4 783 aa10.98□□□□□ -0.65
USP15-213ENST00000549268 NRG2O14511 850 aaPredicted RBP10.97□□□□□ -0.65
USP15-213ENST00000549268 PDZRN3Q9UPQ7 1066 aa10.97□□□□□ -0.65
USP15-213ENST00000549268 GDF9O60383 454 aa10.96□□□□□ -0.65
USP15-213ENST00000549268 GFRA3O60609 400 aa10.96□□□□□ -0.65
USP15-213ENST00000549268 KCNH2Q12809 1159 aa10.96□□□□□ -0.65
USP15-213ENST00000549268 HELBQ8NG08 1087 aaPredicted RBP10.96□□□□□ -0.65
USP15-213ENST00000549268 PTCRAQ6ISU1 281 aaPredicted RBP10.95□□□□□ -0.66
USP15-213ENST00000549268 PCMTD1Q96MG8 357 aaPredicted RBP10.95□□□□□ -0.66
USP15-213ENST00000549268 WNT7BP56706 349 aa10.94□□□□□ -0.66
USP15-213ENST00000549268 PKD2L1Q9P0L9 805 aa10.94□□□□□ -0.66
USP15-213ENST00000549268 F12P00748 615 aaPredicted RBP10.93□□□□□ -0.66
USP15-213ENST00000549268 WNT7AO00755 349 aa10.92□□□□□ -0.66
USP15-213ENST00000549268 UNC93B1Q9H1C4 597 aa10.92□□□□□ -0.66
USP15-213ENST00000549268 PER1O15534 1290 aaPredicted RBP10.91□□□□□ -0.66
USP15-213ENST00000549268 FBXO31Q5XUX0 539 aaPredicted RBP10.91□□□□□ -0.66
USP15-213ENST00000549268 TSC1Q92574 1164 aa10.9□□□□□ -0.66
USP15-213ENST00000549268 ATP1B4Q9UN42 357 aaPredicted RBP10.89□□□□□ -0.67
USP15-213ENST00000549268 CTHP32929 405 aa10.88□□□□□ -0.67
USP15-213ENST00000549268 SKOR1P84550 965 aa10.88□□□□□ -0.67
USP15-213ENST00000549268 CTDSPL2Q05D32 466 aa10.88□□□□□ -0.67
USP15-213ENST00000549268 FOXC1Q12948 553 aa10.87□□□□□ -0.67
USP15-213ENST00000549268 TNFRSF10AO00220 468 aa10.86□□□□□ -0.67
USP15-213ENST00000549268 RFC5P40937 340 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms