RNA–Protein interactions for RNA: ENST00000549226.5

CACNB3-211, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 2

Gene CACNB3, Length 929 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-211ENST00000549226 NWD1Q149M9 1564 aa19.59■□□□□ 0.73
CACNB3-211ENST00000549226 NKTRP30414 1462 aaKnown RBP19.58■□□□□ 0.72
CACNB3-211ENST00000549226 NINLQ9Y2I6 1382 aa19.57■□□□□ 0.72
CACNB3-211ENST00000549226 DDX10Q13206 875 aaKnown RBP19.56■□□□□ 0.72
CACNB3-211ENST00000549226 WAPLQ7Z5K2 1190 aa19.56■□□□□ 0.72
CACNB3-211ENST00000549226 ADGRB2O60241 1585 aa19.56■□□□□ 0.72
CACNB3-211ENST00000549226 ATAD2Q6PL18 1390 aa19.56■□□□□ 0.72
CACNB3-211ENST00000549226 PLEKHH1Q9ULM0 1364 aa19.56■□□□□ 0.72
CACNB3-211ENST00000549226 CHD2O14647 1828 aaKnown RBP19.55■□□□□ 0.72
CACNB3-211ENST00000549226 TULP4Q9NRJ4 1543 aa19.55■□□□□ 0.72
CACNB3-211ENST00000549226 MINK1Q8N4C8 1332 aaPredicted RBP19.54■□□□□ 0.72
CACNB3-211ENST00000549226 SAFB2Q14151 953 aaKnown RBP eCLIP19.54■□□□□ 0.72
CACNB3-211ENST00000549226 STRCQ7RTU9 1775 aa19.53■□□□□ 0.72
CACNB3-211ENST00000549226 POLR3GLQ9BT43 218 aa19.53■□□□□ 0.72
CACNB3-211ENST00000549226 NCOA3Q9Y6Q9 1424 aa19.52■□□□□ 0.72
CACNB3-211ENST00000549226 WASLO00401 505 aaPredicted RBP19.51■□□□□ 0.71
CACNB3-211ENST00000549226 SRPK2P78362 688 aaKnown RBP19.5■□□□□ 0.71
CACNB3-211ENST00000549226 CDK19Q9BWU1 502 aa19.49■□□□□ 0.71
CACNB3-211ENST00000549226 ADGRL3Q9HAR2 1447 aa19.47■□□□□ 0.71
CACNB3-211ENST00000549226 CABP2Q9NPB3 220 aa19.45■□□□□ 0.7
CACNB3-211ENST00000549226 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.45■□□□□ 0.7
CACNB3-211ENST00000549226 CDC42BPGQ6DT37 1551 aa19.44■□□□□ 0.7
CACNB3-211ENST00000549226 ANKARQ7Z5J8 1434 aa19.44■□□□□ 0.7
CACNB3-211ENST00000549226 PROSER2Q86WR7 435 aaPredicted RBP19.44■□□□□ 0.7
CACNB3-211ENST00000549226 PANK3Q9H999 370 aa19.42■□□□□ 0.7
CACNB3-211ENST00000549226 CCDC61Q9Y6R9 512 aa19.42■□□□□ 0.7
CACNB3-211ENST00000549226 ANKRD36BQ8N2N9 1353 aa19.42■□□□□ 0.7
CACNB3-211ENST00000549226 DCCP43146 1447 aa19.42■□□□□ 0.7
CACNB3-211ENST00000549226 ANP32CO43423 234 aa19.41■□□□□ 0.7
CACNB3-211ENST00000549226 TMC1Q8TDI8 760 aa19.41■□□□□ 0.7
CACNB3-211ENST00000549226 TERF2IPQ9NYB0 399 aa19.41■□□□□ 0.7
CACNB3-211ENST00000549226 ATP7BP35670 1465 aa19.41■□□□□ 0.7
CACNB3-211ENST00000549226 MYOM1P52179 1685 aa19.4■□□□□ 0.7
CACNB3-211ENST00000549226 NUDT16Q96DE0 195 aaKnown RBP19.4■□□□□ 0.7
CACNB3-211ENST00000549226 KTN1Q86UP2 1357 aaKnown RBP19.4■□□□□ 0.7
CACNB3-211ENST00000549226 C14orf37Q86TY3 774 aa19.39■□□□□ 0.69
CACNB3-211ENST00000549226 C19orf44Q9H6X5 657 aa19.39■□□□□ 0.69
CACNB3-211ENST00000549226 TMEM94Q12767 1356 aa19.39■□□□□ 0.69
CACNB3-211ENST00000549226 NPC1L1Q9UHC9 1359 aa19.38■□□□□ 0.69
CACNB3-211ENST00000549226 KNSTRNQ9Y448 316 aa19.38■□□□□ 0.69
CACNB3-211ENST00000549226 PER1O15534 1290 aaPredicted RBP19.37■□□□□ 0.69
CACNB3-211ENST00000549226 HDGFL2Q7Z4V5 671 aaPredicted RBP19.37■□□□□ 0.69
CACNB3-211ENST00000549226 SLC12A5Q9H2X9 1139 aa19.37■□□□□ 0.69
CACNB3-211ENST00000549226 PPIP5K1Q6PFW1 1433 aa19.36■□□□□ 0.69
CACNB3-211ENST00000549226 ZNF335Q9H4Z2 1342 aaPredicted RBP19.36■□□□□ 0.69
CACNB3-211ENST00000549226 NALCNQ8IZF0 1738 aa19.36■□□□□ 0.69
CACNB3-211ENST00000549226 PLEKHG3A1L390 1219 aa19.35■□□□□ 0.69
CACNB3-211ENST00000549226 CABP1Q9NZU7 370 aa19.35■□□□□ 0.69
CACNB3-211ENST00000549226 MSH6P52701 1360 aa19.34■□□□□ 0.69
CACNB3-211ENST00000549226 PRR36Q9H6K5 1346 aa19.34■□□□□ 0.69
CACNB3-211ENST00000549226 ZNF692Q9BU19 519 aaPredicted RBP19.34■□□□□ 0.69
CACNB3-211ENST00000549226 LRRC7Q96NW7 1537 aa19.34■□□□□ 0.69
CACNB3-211ENST00000549226 FMN2Q9NZ56 1722 aa19.34■□□□□ 0.69
CACNB3-211ENST00000549226 CADPS2Q86UW7 1296 aa19.33■□□□□ 0.68
CACNB3-211ENST00000549226 STRCP1A6NGW2 1772 aa19.33■□□□□ 0.68
CACNB3-211ENST00000549226 A0A1W2PP64 1363 aa19.32■□□□□ 0.68
CACNB3-211ENST00000549226 NSD2O96028 1365 aa19.32■□□□□ 0.68
CACNB3-211ENST00000549226 ATF3P18847 181 aa19.32■□□□□ 0.68
CACNB3-211ENST00000549226 TOPAZ1Q8N9V7 1692 aa19.32■□□□□ 0.68
CACNB3-211ENST00000549226 CPSF1Q10570 1443 aaKnown RBP19.32■□□□□ 0.68
CACNB3-211ENST00000549226 CD163L1Q9NR16 1453 aa19.31■□□□□ 0.68
CACNB3-211ENST00000549226 RALBP1Q15311 655 aa19.31■□□□□ 0.68
CACNB3-211ENST00000549226 NSD3Q9BZ95 1437 aa19.31■□□□□ 0.68
CACNB3-211ENST00000549226 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
CACNB3-211ENST00000549226 CGNL1Q0VF96 1302 aa19.3■□□□□ 0.68
CACNB3-211ENST00000549226 USP32Q8NFA0 1604 aa19.3■□□□□ 0.68
CACNB3-211ENST00000549226 PRKRIP1Q9H875 184 aaPredicted RBP19.3■□□□□ 0.68
CACNB3-211ENST00000549226 AMER1Q5JTC6 1135 aaPredicted RBP19.29■□□□□ 0.68
CACNB3-211ENST00000549226 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
CACNB3-211ENST00000549226 POLR3AO14802 1390 aaPredicted RBP19.29■□□□□ 0.68
CACNB3-211ENST00000549226 BRD4O60885 1362 aaPredicted RBP19.29■□□□□ 0.68
CACNB3-211ENST00000549226 EDC4Q6P2E9 1401 aaKnown RBP19.28■□□□□ 0.68
CACNB3-211ENST00000549226 MIER1Q8N108 512 aa19.28■□□□□ 0.68
CACNB3-211ENST00000549226 RBM33Q96EV2 1170 aaKnown RBP19.28■□□□□ 0.68
CACNB3-211ENST00000549226 CCER2I3L3R5 266 aa19.27■□□□□ 0.68
CACNB3-211ENST00000549226 PHF23Q9BUL5 403 aaPredicted RBP19.26■□□□□ 0.67
CACNB3-211ENST00000549226 PARD3Q8TEW0 1356 aa19.26■□□□□ 0.67
CACNB3-211ENST00000549226 C1orf167Q5SNV9 1468 aa19.25■□□□□ 0.67
CACNB3-211ENST00000549226 MST1RQ04912 1400 aa19.25■□□□□ 0.67
CACNB3-211ENST00000549226 ACEP12821 1306 aa19.25■□□□□ 0.67
CACNB3-211ENST00000549226 NUTM2FA1L443 756 aa19.24■□□□□ 0.67
CACNB3-211ENST00000549226 NGDNQ8NEJ9 315 aaKnown RBP19.24■□□□□ 0.67
CACNB3-211ENST00000549226 PHF8Q9UPP1 1060 aa19.24■□□□□ 0.67
CACNB3-211ENST00000549226 LTBP4Q8N2S1 1624 aa19.23■□□□□ 0.67
CACNB3-211ENST00000549226 USP6P35125 1406 aa19.23■□□□□ 0.67
CACNB3-211ENST00000549226 MYBBP1AQ9BQG0 1328 aaKnown RBP19.22■□□□□ 0.67
CACNB3-211ENST00000549226 ESCO1Q5FWF5 840 aa19.21■□□□□ 0.67
CACNB3-211ENST00000549226 TTC21AQ8NDW8 1320 aa19.21■□□□□ 0.67
CACNB3-211ENST00000549226 KIF1AQ12756 1690 aa19.2■□□□□ 0.66
CACNB3-211ENST00000549226 MON2Q7Z3U7 1717 aa19.2■□□□□ 0.66
CACNB3-211ENST00000549226 CC2D1BQ5T0F9 858 aaKnown RBP19.2■□□□□ 0.66
CACNB3-211ENST00000549226 AKAP12Q02952 1782 aa19.19■□□□□ 0.66
CACNB3-211ENST00000549226 PMFBP1Q8TBY8 1022 aa19.19■□□□□ 0.66
CACNB3-211ENST00000549226 SSH2Q76I76 1423 aa19.18■□□□□ 0.66
CACNB3-211ENST00000549226 XIRP1Q702N8 1843 aaKnown RBP19.18■□□□□ 0.66
CACNB3-211ENST00000549226 NLRP13Q86W25 1043 aa19.17■□□□□ 0.66
CACNB3-211ENST00000549226 TTC21BQ7Z4L5 1316 aa19.17■□□□□ 0.66
CACNB3-211ENST00000549226 FYB1O15117 783 aa19.16■□□□□ 0.66
CACNB3-211ENST00000549226 MORC1Q86VD1 984 aa19.16■□□□□ 0.66
CACNB3-211ENST00000549226 IQSEC2Q5JU85 1478 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms