RNA–Protein interactions for RNA: ENST00000549128.5

CHPT1-204, Transcript of choline phosphotransferase 1, humanhuman

TSL 5

Gene CHPT1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-204ENST00000549128 ADGRL3Q9HAR2 1447 aa37.26■■■■□ 3.56
CHPT1-204ENST00000549128 MINK1Q8N4C8 1332 aaPredicted RBP37.25■■■■□ 3.55
CHPT1-204ENST00000549128 EIF3AQ14152 1382 aaKnown RBP37.25■■■■□ 3.55
CHPT1-204ENST00000549128 HIRIP3Q9BW71 556 aaPredicted RBP37.25■■■■□ 3.55
CHPT1-204ENST00000549128 C19orf44Q9H6X5 657 aa37.24■■■■□ 3.55
CHPT1-204ENST00000549128 ST20-MTHFSA0A0A6YYL1 179 aa37.23■■■■□ 3.55
CHPT1-204ENST00000549128 MSH6P52701 1360 aa37.21■■■■□ 3.55
CHPT1-204ENST00000549128 QRICH2Q9H0J4 1663 aa37.18■■■■□ 3.54
CHPT1-204ENST00000549128 IQSEC2Q5JU85 1478 aa37.16■■■■□ 3.54
CHPT1-204ENST00000549128 HSPA5P11021 654 aaKnown RBP37.15■■■■□ 3.54
CHPT1-204ENST00000549128 EIF4G2P78344 907 aaKnown RBP eCLIP37.15■■■■□ 3.54
CHPT1-204ENST00000549128 TESK2Q96S53 571 aa37.13■■■■□ 3.53
CHPT1-204ENST00000549128 ATF3P18847 181 aa37.11■■■■□ 3.53
CHPT1-204ENST00000549128 ADGRB2O60241 1585 aa37.1■■■■□ 3.53
CHPT1-204ENST00000549128 DCCP43146 1447 aa37.09■■■■□ 3.53
CHPT1-204ENST00000549128 CDC42BPGQ6DT37 1551 aa37.09■■■■□ 3.53
CHPT1-204ENST00000549128 WASLO00401 505 aaPredicted RBP37.08■■■■□ 3.53
CHPT1-204ENST00000549128 CADPS2Q86UW7 1296 aa37.08■■■■□ 3.53
CHPT1-204ENST00000549128 NUTM2FA1L443 756 aa37.08■■■■□ 3.53
CHPT1-204ENST00000549128 SBNO2Q9Y2G9 1366 aa37.07■■■■□ 3.53
CHPT1-204ENST00000549128 CDK19Q9BWU1 502 aa37.05■■■■□ 3.52
CHPT1-204ENST00000549128 TULP4Q9NRJ4 1543 aa37.05■■■■□ 3.52
CHPT1-204ENST00000549128 UBAP1LF5GYI3 381 aa37.04■■■■□ 3.52
CHPT1-204ENST00000549128 MST1RQ04912 1400 aa37.03■■■■□ 3.52
CHPT1-204ENST00000549128 SLAIN2Q9P270 581 aa37.02■■■■□ 3.52
CHPT1-204ENST00000549128 FMN2Q9NZ56 1722 aa37.01■■■■□ 3.51
CHPT1-204ENST00000549128 TOM1O60784 492 aa37■■■■□ 3.51
CHPT1-204ENST00000549128 CABP2Q9NPB3 220 aa37■■■■□ 3.51
CHPT1-204ENST00000549128 EVC2Q86UK5 1308 aa36.99■■■■□ 3.51
CHPT1-204ENST00000549128 PRR36Q9H6K5 1346 aa36.98■■■■□ 3.51
CHPT1-204ENST00000549128 SRPK2P78362 688 aaKnown RBP36.96■■■■□ 3.51
CHPT1-204ENST00000549128 C1orf167Q5SNV9 1468 aa36.96■■■■□ 3.51
CHPT1-204ENST00000549128 DISP3Q9P2K9 1392 aa36.95■■■■□ 3.51
CHPT1-204ENST00000549128 USP32Q8NFA0 1604 aa36.93■■■■□ 3.5
CHPT1-204ENST00000549128 PIP4K2BP78356 416 aa36.93■■■■□ 3.5
CHPT1-204ENST00000549128 ORAI2Q96SN7 254 aa36.92■■■■□ 3.5
CHPT1-204ENST00000549128 NUDT16Q96DE0 195 aaKnown RBP36.91■■■■□ 3.5
CHPT1-204ENST00000549128 RGPD8O14715 1765 aaPredicted RBP36.91■■■■□ 3.5
CHPT1-204ENST00000549128 TMF1P82094 1093 aa36.91■■■■□ 3.5
CHPT1-204ENST00000549128 ATP7BP35670 1465 aa36.9■■■■□ 3.5
CHPT1-204ENST00000549128 ANKARQ7Z5J8 1434 aa36.88■■■■□ 3.49
CHPT1-204ENST00000549128 C11orf95C9JLR9 678 aaPredicted RBP36.87■■■■□ 3.49
CHPT1-204ENST00000549128 SLC24A1O60721 1099 aa36.87■■■■□ 3.49
CHPT1-204ENST00000549128 ESCO1Q5FWF5 840 aa36.87■■■■□ 3.49
CHPT1-204ENST00000549128 SCAF1Q9H7N4 1312 aaKnown RBP36.87■■■■□ 3.49
CHPT1-204ENST00000549128 BRINP3Q76B58 766 aa36.86■■■■□ 3.49
CHPT1-204ENST00000549128 CCDC61Q9Y6R9 512 aa36.82■■■■□ 3.48
CHPT1-204ENST00000549128 ROBO1Q9Y6N7 1651 aa36.81■■■■□ 3.48
CHPT1-204ENST00000549128 PMFBP1Q8TBY8 1022 aa36.8■■■■□ 3.48
CHPT1-204ENST00000549128 PHF8Q9UPP1 1060 aa36.78■■■■□ 3.48
CHPT1-204ENST00000549128 DDX17Q92841 729 aaKnown RBP36.78■■■■□ 3.48
CHPT1-204ENST00000549128 PUS7Q96PZ0 661 aaKnown RBP36.78■■■■□ 3.48
CHPT1-204ENST00000549128 CABP1Q9NZU7 370 aa36.77■■■■□ 3.48
CHPT1-204ENST00000549128 ATAD2Q6PL18 1390 aa36.77■■■■□ 3.48
CHPT1-204ENST00000549128 TOPAZ1Q8N9V7 1692 aa36.76■■■■□ 3.48
CHPT1-204ENST00000549128 PPIP5K1Q6PFW1 1433 aa36.76■■■■□ 3.48
CHPT1-204ENST00000549128 POLR3GLQ9BT43 218 aa36.74■■■■□ 3.47
CHPT1-204ENST00000549128 CDCA8Q53HL2 280 aa36.74■■■■□ 3.47
CHPT1-204ENST00000549128 FOXO3O43524 673 aa36.73■■■■□ 3.47
CHPT1-204ENST00000549128 FBXO41Q8TF61 875 aa36.73■■■■□ 3.47
CHPT1-204ENST00000549128 PLEKHG3A1L390 1219 aa36.72■■■■□ 3.47
CHPT1-204ENST00000549128 ITSN1Q15811 1721 aa36.71■■■■□ 3.47
CHPT1-204ENST00000549128 SLC12A5Q9H2X9 1139 aa36.71■■■■□ 3.47
CHPT1-204ENST00000549128 KIF7Q2M1P5 1343 aa36.71■■■■□ 3.47
CHPT1-204ENST00000549128 TMC1Q8TDI8 760 aa36.7■■■■□ 3.47
CHPT1-204ENST00000549128 ACEP12821 1306 aa36.67■■■■□ 3.46
CHPT1-204ENST00000549128 KIF1AQ12756 1690 aa36.66■■■■□ 3.46
CHPT1-204ENST00000549128 XPCQ01831 940 aaPredicted RBP36.66■■■■□ 3.46
CHPT1-204ENST00000549128 NGDNQ8NEJ9 315 aaKnown RBP36.66■■■■□ 3.46
CHPT1-204ENST00000549128 WASHC2AQ641Q2 1341 aa36.65■■■■□ 3.46
CHPT1-204ENST00000549128 POLR3AO14802 1390 aaPredicted RBP36.63■■■■□ 3.45
CHPT1-204ENST00000549128 CCDC7Q96M83 1385 aa36.62■■■■□ 3.45
CHPT1-204ENST00000549128 NHSL1Q5SYE7 1610 aa36.62■■■■□ 3.45
CHPT1-204ENST00000549128 CD163L1Q9NR16 1453 aa36.6■■■■□ 3.45
CHPT1-204ENST00000549128 NPHP3Q7Z494 1330 aa36.6■■■■□ 3.45
CHPT1-204ENST00000549128 AHDC1Q5TGY3 1603 aaPredicted RBP36.6■■■■□ 3.45
CHPT1-204ENST00000549128 MYOM1P52179 1685 aa36.6■■■■□ 3.45
CHPT1-204ENST00000549128 HSPA1LP34931 641 aa36.58■■■■□ 3.45
CHPT1-204ENST00000549128 PSME1Q06323 249 aa36.58■■■■□ 3.45
CHPT1-204ENST00000549128 KRT28Q7Z3Y7 464 aa36.58■■■■□ 3.45
CHPT1-204ENST00000549128 SOS2Q07890 1332 aaPredicted RBP36.57■■■■□ 3.45
CHPT1-204ENST00000549128 CPSF1Q10570 1443 aaKnown RBP36.56■■■■□ 3.44
CHPT1-204ENST00000549128 PXDNQ92626 1479 aa36.56■■■■□ 3.44
CHPT1-204ENST00000549128 NINLQ9Y2I6 1382 aa36.56■■■■□ 3.44
CHPT1-204ENST00000549128 PHLPP1O60346 1717 aa36.54■■■■□ 3.44
CHPT1-204ENST00000549128 A0A1W2PP64 1363 aa36.53■■■■□ 3.44
CHPT1-204ENST00000549128 COL16A1Q07092 1604 aaPredicted RBP36.5■■■■□ 3.43
CHPT1-204ENST00000549128 ZNF692Q9BU19 519 aaPredicted RBP36.5■■■■□ 3.43
CHPT1-204ENST00000549128 TERF2IPQ9NYB0 399 aa36.5■■■■□ 3.43
CHPT1-204ENST00000549128 AKAP12Q02952 1782 aa36.5■■■■□ 3.43
CHPT1-204ENST00000549128 HDGFL2Q7Z4V5 671 aaPredicted RBP36.49■■■■□ 3.43
CHPT1-204ENST00000549128 USP6P35125 1406 aa36.49■■■■□ 3.43
CHPT1-204ENST00000549128 KTN1Q86UP2 1357 aaKnown RBP36.49■■■■□ 3.43
CHPT1-204ENST00000549128 ANKRD36BQ8N2N9 1353 aa36.49■■■■□ 3.43
CHPT1-204ENST00000549128 TRPM3Q9HCF6 1732 aaPredicted RBP36.45■■■■□ 3.43
CHPT1-204ENST00000549128 SSH2Q76I76 1423 aa36.45■■■■□ 3.43
CHPT1-204ENST00000549128 ZNF316A6NFI3 1004 aaPredicted RBP36.44■■■■□ 3.42
CHPT1-204ENST00000549128 PAK3O75914 559 aaPredicted RBP36.44■■■■□ 3.42
CHPT1-204ENST00000549128 CARD14Q9BXL6 1004 aa36.44■■■■□ 3.42
CHPT1-204ENST00000549128 PANK3Q9H999 370 aa36.44■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms