RNA–Protein interactions for RNA: ENST00000549094.1

SMPDL3B-206, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

TSL 5 BASIC

Gene SMPDL3B, Length 1,611 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-206ENST00000549094 SALL2Q9Y467 1007 aaPredicted RBP17.57■□□□□ 0.4
SMPDL3B-206ENST00000549094 CDCA7LQ96GN5 454 aa17.56■□□□□ 0.4
SMPDL3B-206ENST00000549094 PANK3Q9H999 370 aa17.56■□□□□ 0.4
SMPDL3B-206ENST00000549094 MYO5BQ9ULV0 1848 aa17.55■□□□□ 0.4
SMPDL3B-206ENST00000549094 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
SMPDL3B-206ENST00000549094 CDCA8Q53HL2 280 aa17.55■□□□□ 0.4
SMPDL3B-206ENST00000549094 CC2D1BQ5T0F9 858 aaKnown RBP17.55■□□□□ 0.4
SMPDL3B-206ENST00000549094 PIK3C2GO75747 1445 aa17.55■□□□□ 0.4
SMPDL3B-206ENST00000549094 THEMISQ8N1K5 641 aaPredicted RBP17.54■□□□□ 0.4
SMPDL3B-206ENST00000549094 KIAA1210Q9ULL0 1709 aa17.54■□□□□ 0.4
SMPDL3B-206ENST00000549094 WDR43Q15061 677 aaKnown RBP eCLIP17.54■□□□□ 0.4
SMPDL3B-206ENST00000549094 VIRMAQ69YN4 1812 aaKnown RBP17.54■□□□□ 0.4
SMPDL3B-206ENST00000549094 ASXL1Q8IXJ9 1541 aa17.53■□□□□ 0.4
SMPDL3B-206ENST00000549094 KDM2BQ8NHM5 1336 aa17.53■□□□□ 0.4
SMPDL3B-206ENST00000549094 STAC3Q96MF2 364 aa17.53■□□□□ 0.4
SMPDL3B-206ENST00000549094 LAS1LQ9Y4W2 734 aaKnown RBP17.53■□□□□ 0.4
SMPDL3B-206ENST00000549094 NPC1L1Q9UHC9 1359 aa17.53■□□□□ 0.4
SMPDL3B-206ENST00000549094 RPGRIP1LQ68CZ1 1315 aa17.52■□□□□ 0.4
SMPDL3B-206ENST00000549094 MYOM1P52179 1685 aa17.51■□□□□ 0.39
SMPDL3B-206ENST00000549094 NCKAP5LQ9HCH0 1330 aa17.51■□□□□ 0.39
SMPDL3B-206ENST00000549094 MED14O60244 1454 aa17.51■□□□□ 0.39
SMPDL3B-206ENST00000549094 DAXXQ9UER7 740 aaPredicted RBP17.5■□□□□ 0.39
SMPDL3B-206ENST00000549094 SCAF11Q99590 1463 aaKnown RBP17.5■□□□□ 0.39
SMPDL3B-206ENST00000549094 KNSTRNQ9Y448 316 aa17.5■□□□□ 0.39
SMPDL3B-206ENST00000549094 LTBP4Q8N2S1 1624 aa17.49■□□□□ 0.39
SMPDL3B-206ENST00000549094 PLIN1O60240 522 aa17.49■□□□□ 0.39
SMPDL3B-206ENST00000549094 SLIT1O75093 1534 aa17.49■□□□□ 0.39
SMPDL3B-206ENST00000549094 TMEM2Q9UHN6 1383 aa17.48■□□□□ 0.39
SMPDL3B-206ENST00000549094 HDGFP51858 240 aaKnown RBP17.48■□□□□ 0.39
SMPDL3B-206ENST00000549094 FAM161AQ3B820 660 aa17.48■□□□□ 0.39
SMPDL3B-206ENST00000549094 ANKLE2Q86XL3 938 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 RIMS2Q9UQ26 1411 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 PPLO60437 1756 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 ARHGAP23Q9P227 1491 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 ZNF521Q96K83 1311 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 NEXMIFQ5QGS0 1516 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 NINLQ9Y2I6 1382 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 IFT172Q9UG01 1749 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 GOLGA2Q08379 1002 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 NGEFQ8N5V2 710 aa17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.47■□□□□ 0.39
SMPDL3B-206ENST00000549094 IQSEC2Q5JU85 1478 aa17.46■□□□□ 0.39
SMPDL3B-206ENST00000549094 VGFO15240 615 aaPredicted RBP17.46■□□□□ 0.39
SMPDL3B-206ENST00000549094 DUSP27Q5VZP5 1158 aa17.46■□□□□ 0.39
SMPDL3B-206ENST00000549094 CERKQ8TCT0 537 aa17.46■□□□□ 0.39
SMPDL3B-206ENST00000549094 FBXO41Q8TF61 875 aa17.46■□□□□ 0.39
SMPDL3B-206ENST00000549094 PLEKHH1Q9ULM0 1364 aa17.45■□□□□ 0.38
SMPDL3B-206ENST00000549094 SLC24A1O60721 1099 aa17.45■□□□□ 0.38
SMPDL3B-206ENST00000549094 ILDR1Q86SU0 546 aaPredicted RBP17.45■□□□□ 0.38
SMPDL3B-206ENST00000549094 ADAMTS8Q9UP79 889 aa17.45■□□□□ 0.38
SMPDL3B-206ENST00000549094 ZFYVE9O95405 1425 aa17.45■□□□□ 0.38
SMPDL3B-206ENST00000549094 MYOM2P54296 1465 aa17.44■□□□□ 0.38
SMPDL3B-206ENST00000549094 NUTM2DQ5VT03 806 aaPredicted RBP17.44■□□□□ 0.38
SMPDL3B-206ENST00000549094 EID1Q9Y6B2 187 aa17.44■□□□□ 0.38
SMPDL3B-206ENST00000549094 NKTRP30414 1462 aaKnown RBP17.44■□□□□ 0.38
SMPDL3B-206ENST00000549094 NPHP4O75161 1426 aaPredicted RBP17.43■□□□□ 0.38
SMPDL3B-206ENST00000549094 TXNDC2Q86VQ3 553 aa17.43■□□□□ 0.38
SMPDL3B-206ENST00000549094 ADGRF5Q8IZF2 1346 aa17.42■□□□□ 0.38
SMPDL3B-206ENST00000549094 AMER1Q5JTC6 1135 aaPredicted RBP17.41■□□□□ 0.38
SMPDL3B-206ENST00000549094 LTKP29376 864 aa17.39■□□□□ 0.38
SMPDL3B-206ENST00000549094 SLFN5Q08AF3 891 aa17.39■□□□□ 0.38
SMPDL3B-206ENST00000549094 GSE1Q14687 1217 aa17.39■□□□□ 0.38
SMPDL3B-206ENST00000549094 C20orf194Q5TEA3 1177 aa17.39■□□□□ 0.38
SMPDL3B-206ENST00000549094 CPS1P31327 1500 aa17.39■□□□□ 0.37
SMPDL3B-206ENST00000549094 NRXN1Q9ULB1 1477 aa17.39■□□□□ 0.37
SMPDL3B-206ENST00000549094 ZNF335Q9H4Z2 1342 aaPredicted RBP17.38■□□□□ 0.37
SMPDL3B-206ENST00000549094 NFKBIBQ15653 356 aa17.38■□□□□ 0.37
SMPDL3B-206ENST00000549094 C8orf34Q49A92 452 aa17.38■□□□□ 0.37
SMPDL3B-206ENST00000549094 TRMT2AQ8IZ69 625 aaKnown RBP17.37■□□□□ 0.37
SMPDL3B-206ENST00000549094 PLEKHG1Q9ULL1 1385 aa17.36■□□□□ 0.37
SMPDL3B-206ENST00000549094 E9PSI1 815 aa17.36■□□□□ 0.37
SMPDL3B-206ENST00000549094 CGNL1Q0VF96 1302 aa17.35■□□□□ 0.37
SMPDL3B-206ENST00000549094 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
SMPDL3B-206ENST00000549094 IL27Q8NEV9 243 aa17.34■□□□□ 0.37
SMPDL3B-206ENST00000549094 SENP3Q9H4L4 574 aaPredicted RBP17.34■□□□□ 0.37
SMPDL3B-206ENST00000549094 C14orf93Q9H972 538 aaKnown RBP17.33■□□□□ 0.37
SMPDL3B-206ENST00000549094 STRCP1A6NGW2 1772 aa17.33■□□□□ 0.36
SMPDL3B-206ENST00000549094 AAMPQ13685 434 aa17.32■□□□□ 0.36
SMPDL3B-206ENST00000549094 CFAP70Q5T0N1 1121 aa17.32■□□□□ 0.36
SMPDL3B-206ENST00000549094 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
SMPDL3B-206ENST00000549094 PDE3AQ14432 1141 aa17.31■□□□□ 0.36
SMPDL3B-206ENST00000549094 SKAP1Q86WV1 359 aa17.3■□□□□ 0.36
SMPDL3B-206ENST00000549094 ALKQ9UM73 1620 aa17.3■□□□□ 0.36
SMPDL3B-206ENST00000549094 NRXN3Q9Y4C0 1643 aa17.29■□□□□ 0.36
SMPDL3B-206ENST00000549094 SBNO2Q9Y2G9 1366 aa17.29■□□□□ 0.36
SMPDL3B-206ENST00000549094 USP32Q8NFA0 1604 aa17.28■□□□□ 0.36
SMPDL3B-206ENST00000549094 POLR3AO14802 1390 aaPredicted RBP17.28■□□□□ 0.36
SMPDL3B-206ENST00000549094 SLC26A8Q96RN1 970 aa17.28■□□□□ 0.36
SMPDL3B-206ENST00000549094 ADAMTS13Q76LX8 1427 aa17.28■□□□□ 0.36
SMPDL3B-206ENST00000549094 DIP2AQ14689 1571 aa17.27■□□□□ 0.36
SMPDL3B-206ENST00000549094 RGS3P49796 1198 aa17.27■□□□□ 0.36
SMPDL3B-206ENST00000549094 BECN1Q14457 450 aa17.27■□□□□ 0.36
SMPDL3B-206ENST00000549094 TBX22Q9Y458 520 aa17.27■□□□□ 0.36
SMPDL3B-206ENST00000549094 CENPJQ9HC77 1338 aaPredicted RBP17.26■□□□□ 0.35
SMPDL3B-206ENST00000549094 SHPRHQ149N8 1683 aa17.25■□□□□ 0.35
SMPDL3B-206ENST00000549094 SETD1AO15047 1707 aaKnown RBP17.25■□□□□ 0.35
SMPDL3B-206ENST00000549094 APAF1O14727 1248 aa17.25■□□□□ 0.35
SMPDL3B-206ENST00000549094 TMEM132EQ6IEE7 984 aa17.25■□□□□ 0.35
SMPDL3B-206ENST00000549094 FRAT1Q92837 279 aaPredicted RBP17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms