RNA–Protein interactions for RNA: ENST00000548979.1

SLC38A1-205, Transcript of solute carrier family 38 member 1, humanhuman

TSL 4

Gene SLC38A1, Length 543 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-205ENST00000548979 MRPL50Q8N5N7 158 aaKnown RBP13.37□□□□□ -0.27
SLC38A1-205ENST00000548979 TTC13Q8NBP0 860 aa13.37□□□□□ -0.27
SLC38A1-205ENST00000548979 STAC3Q96MF2 364 aa13.35□□□□□ -0.27
SLC38A1-205ENST00000548979 CLIP1P30622 1438 aa13.34□□□□□ -0.27
SLC38A1-205ENST00000548979 FECHP22830 423 aa13.34□□□□□ -0.27
SLC38A1-205ENST00000548979 KCTD12Q96CX2 325 aaKnown RBP13.34□□□□□ -0.27
SLC38A1-205ENST00000548979 NBPF3Q9H094 633 aa13.34□□□□□ -0.27
SLC38A1-205ENST00000548979 CDK13Q14004 1512 aaKnown RBP13.34□□□□□ -0.27
SLC38A1-205ENST00000548979 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
SLC38A1-205ENST00000548979 FAM161AQ3B820 660 aa13.33□□□□□ -0.28
SLC38A1-205ENST00000548979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.33□□□□□ -0.28
SLC38A1-205ENST00000548979 PACS2Q86VP3 889 aa13.33□□□□□ -0.28
SLC38A1-205ENST00000548979 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.33□□□□□ -0.28
SLC38A1-205ENST00000548979 FANCAO15360 1455 aa13.32□□□□□ -0.28
SLC38A1-205ENST00000548979 CCDC18Q5T9S5 1454 aa13.32□□□□□ -0.28
SLC38A1-205ENST00000548979 FCHSD2O94868 740 aa13.32□□□□□ -0.28
SLC38A1-205ENST00000548979 CFAP74Q9C0B2 1584 aa13.32□□□□□ -0.28
SLC38A1-205ENST00000548979 PLCH2O75038 1416 aa13.31□□□□□ -0.28
SLC38A1-205ENST00000548979 TROQ12816 1431 aaPredicted RBP13.31□□□□□ -0.28
SLC38A1-205ENST00000548979 AKNAQ7Z591 1439 aa13.31□□□□□ -0.28
SLC38A1-205ENST00000548979 RAPGEF3O95398 923 aa13.31□□□□□ -0.28
SLC38A1-205ENST00000548979 EFCAB2Q5VUJ9 269 aa13.31□□□□□ -0.28
SLC38A1-205ENST00000548979 NUDT18Q6ZVK8 323 aa13.31□□□□□ -0.28
SLC38A1-205ENST00000548979 TATDN2Q93075 761 aa13.31□□□□□ -0.28
SLC38A1-205ENST00000548979 RBM27Q9P2N5 1060 aaKnown RBP13.31□□□□□ -0.28
SLC38A1-205ENST00000548979 DENND4BO75064 1496 aaPredicted RBP13.3□□□□□ -0.28
SLC38A1-205ENST00000548979 PNMA3Q9UL41 463 aa13.3□□□□□ -0.28
SLC38A1-205ENST00000548979 GPIHBP1Q8IV16 184 aa13.29□□□□□ -0.28
SLC38A1-205ENST00000548979 ADGRL1O94910 1474 aa13.29□□□□□ -0.28
SLC38A1-205ENST00000548979 FYCO1Q9BQS8 1478 aa13.29□□□□□ -0.28
SLC38A1-205ENST00000548979 ZFRQ96KR1 1074 aaKnown RBP13.28□□□□□ -0.28
SLC38A1-205ENST00000548979 FAM98CQ17RN3 349 aaKnown RBP13.27□□□□□ -0.29
SLC38A1-205ENST00000548979 WNT2BQ93097 391 aa13.27□□□□□ -0.29
SLC38A1-205ENST00000548979 GOLGA8CPA6NN73 597 aa13.26□□□□□ -0.29
SLC38A1-205ENST00000548979 KIF14Q15058 1648 aa13.26□□□□□ -0.29
SLC38A1-205ENST00000548979 LMOD2Q6P5Q4 547 aa13.26□□□□□ -0.29
SLC38A1-205ENST00000548979 LAPTM4BQ86VI4 370 aa13.26□□□□□ -0.29
SLC38A1-205ENST00000548979 TTC37Q6PGP7 1564 aa13.25□□□□□ -0.29
SLC38A1-205ENST00000548979 HIC1Q14526 733 aa13.25□□□□□ -0.29
SLC38A1-205ENST00000548979 MAGI2Q86UL8 1455 aa13.24□□□□□ -0.29
SLC38A1-205ENST00000548979 NBPF26B4DH59 902 aa13.24□□□□□ -0.29
SLC38A1-205ENST00000548979 GNPATO15228 680 aa13.24□□□□□ -0.29
SLC38A1-205ENST00000548979 BCAMP50895 628 aa13.24□□□□□ -0.29
SLC38A1-205ENST00000548979 THSD4Q6ZMP0 1018 aa13.24□□□□□ -0.29
SLC38A1-205ENST00000548979 EYA1Q99502 592 aa13.24□□□□□ -0.29
SLC38A1-205ENST00000548979 ADGRG1Q9Y653 693 aa13.24□□□□□ -0.29
SLC38A1-205ENST00000548979 SCAPERQ9BY12 1400 aa13.23□□□□□ -0.29
SLC38A1-205ENST00000548979 PCF11O94913 1555 aaKnown RBP13.23□□□□□ -0.29
SLC38A1-205ENST00000548979 ARID4BQ4LE39 1312 aaPredicted RBP13.22□□□□□ -0.29
SLC38A1-205ENST00000548979 PTPN5P54829 565 aa13.22□□□□□ -0.29
SLC38A1-205ENST00000548979 CEP162Q5TB80 1403 aa13.22□□□□□ -0.29
SLC38A1-205ENST00000548979 TULP1O00294 542 aaPredicted RBP13.21□□□□□ -0.29
SLC38A1-205ENST00000548979 MYO5CQ9NQX4 1742 aa13.21□□□□□ -0.3
SLC38A1-205ENST00000548979 ARHGAP5Q13017 1502 aa13.2□□□□□ -0.3
SLC38A1-205ENST00000548979 ANKK1Q8NFD2 765 aa13.2□□□□□ -0.3
SLC38A1-205ENST00000548979 POGZQ7Z3K3 1410 aa13.2□□□□□ -0.3
SLC38A1-205ENST00000548979 FRMPD1Q5SYB0 1578 aa13.2□□□□□ -0.3
SLC38A1-205ENST00000548979 ZMYM4Q5VZL5 1548 aa13.19□□□□□ -0.3
SLC38A1-205ENST00000548979 SAMD7Q7Z3H4 446 aa13.19□□□□□ -0.3
SLC38A1-205ENST00000548979 RICTORQ6R327 1708 aa13.19□□□□□ -0.3
SLC38A1-205ENST00000548979 MTUS2Q5JR59 1369 aa13.19□□□□□ -0.3
SLC38A1-205ENST00000548979 ZNF518AQ6AHZ1 1483 aa13.18□□□□□ -0.3
SLC38A1-205ENST00000548979 SOWAHBA6NEL2 793 aa13.18□□□□□ -0.3
SLC38A1-205ENST00000548979 LRRIQ1Q96JM4 1722 aa13.17□□□□□ -0.3
SLC38A1-205ENST00000548979 ARHGEF40Q8TER5 1519 aa13.17□□□□□ -0.3
SLC38A1-205ENST00000548979 HCSTQ9UBK5 93 aa13.16□□□□□ -0.3
SLC38A1-205ENST00000548979 ZFYVE16Q7Z3T8 1539 aa13.16□□□□□ -0.3
SLC38A1-205ENST00000548979 LOC105371045A0A1W2PR82 267 aa13.15□□□□□ -0.3
SLC38A1-205ENST00000548979 AFAP1Q8N556 730 aa13.14□□□□□ -0.31
SLC38A1-205ENST00000548979 NLRP7Q8WX94 980 aa13.14□□□□□ -0.31
SLC38A1-205ENST00000548979 PHOX2BQ99453 314 aa13.14□□□□□ -0.31
SLC38A1-205ENST00000548979 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.14□□□□□ -0.31
SLC38A1-205ENST00000548979 CCNB3Q8WWL7 1395 aa13.14□□□□□ -0.31
SLC38A1-205ENST00000548979 ATP10AO60312 1499 aa13.14□□□□□ -0.31
SLC38A1-205ENST00000548979 SWT1Q5T5J6 900 aaKnown RBP13.13□□□□□ -0.31
SLC38A1-205ENST00000548979 PXYLP1Q8TE99 480 aa13.13□□□□□ -0.31
SLC38A1-205ENST00000548979 ZC3H15Q8WU90 426 aaKnown RBP13.13□□□□□ -0.31
SLC38A1-205ENST00000548979 LRCH3Q96II8 777 aa13.13□□□□□ -0.31
SLC38A1-205ENST00000548979 WBP1LQ9NX94 342 aa13.13□□□□□ -0.31
SLC38A1-205ENST00000548979 CFDP1Q9UEE9 299 aaPredicted RBP13.13□□□□□ -0.31
SLC38A1-205ENST00000548979 PLEKHH2Q8IVE3 1493 aa13.12□□□□□ -0.31
SLC38A1-205ENST00000548979 RCCD1A6NED2 376 aa13.12□□□□□ -0.31
SLC38A1-205ENST00000548979 METTL3Q86U44 580 aaKnown RBP13.12□□□□□ -0.31
SLC38A1-205ENST00000548979 RBM46Q8TBY0 533 aaKnown RBP13.12□□□□□ -0.31
SLC38A1-205ENST00000548979 ZNF777Q9ULD5 760 aaPredicted RBP13.12□□□□□ -0.31
SLC38A1-205ENST00000548979 PREX2Q70Z35 1606 aa13.12□□□□□ -0.31
SLC38A1-205ENST00000548979 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
SLC38A1-205ENST00000548979 YEATS2Q9ULM3 1422 aa13.12□□□□□ -0.31
SLC38A1-205ENST00000548979 BCANQ96GW7 911 aa13.11□□□□□ -0.31
SLC38A1-205ENST00000548979 GPATCH8Q9UKJ3 1502 aaKnown RBP13.11□□□□□ -0.31
SLC38A1-205ENST00000548979 ADAMTSL3P82987 1691 aa13.11□□□□□ -0.31
SLC38A1-205ENST00000548979 CDC42BPBQ9Y5S2 1711 aa13.1□□□□□ -0.31
SLC38A1-205ENST00000548979 MLH3Q9UHC1 1453 aa13.1□□□□□ -0.31
SLC38A1-205ENST00000548979 HPS5Q9UPZ3 1129 aa13.1□□□□□ -0.31
SLC38A1-205ENST00000548979 KIAA1107Q9UPP5 1409 aa13.1□□□□□ -0.31
SLC38A1-205ENST00000548979 BCORL1Q5H9F3 1711 aa13.1□□□□□ -0.31
SLC38A1-205ENST00000548979 PTPRMP28827 1452 aa13.1□□□□□ -0.31
SLC38A1-205ENST00000548979 EHBP1L1Q8N3D4 1523 aa13.09□□□□□ -0.31
SLC38A1-205ENST00000548979 KDM5CP41229 1560 aa13.09□□□□□ -0.31
SLC38A1-205ENST00000548979 VPS8Q8N3P4 1428 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms