RNA–Protein interactions for RNA: ENST00000548771.1

CCDC38-206, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 470 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-206ENST00000548771 FAM217BQ9NTX9 383 aaPredicted RBP10.67□□□□□ -0.7
CCDC38-206ENST00000548771 FCF1Q9Y324 198 aaKnown RBP10.67□□□□□ -0.7
CCDC38-206ENST00000548771 TOR4AQ9NXH8 423 aa10.66□□□□□ -0.7
CCDC38-206ENST00000548771 CLCN1P35523 988 aa10.65□□□□□ -0.7
CCDC38-206ENST00000548771 PRDM9Q9NQV7 894 aa10.65□□□□□ -0.7
CCDC38-206ENST00000548771 BRICD5Q6PL45 260 aa10.64□□□□□ -0.71
CCDC38-206ENST00000548771 FAM160A2Q8N612 972 aaPredicted RBP10.64□□□□□ -0.71
CCDC38-206ENST00000548771 AMHR2Q16671 573 aa10.63□□□□□ -0.71
CCDC38-206ENST00000548771 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
CCDC38-206ENST00000548771 KRI1Q8N9T8 703 aaKnown RBP10.63□□□□□ -0.71
CCDC38-206ENST00000548771 AXIN1O15169 862 aa10.62□□□□□ -0.71
CCDC38-206ENST00000548771 KDM4AO75164 1064 aa10.62□□□□□ -0.71
CCDC38-206ENST00000548771 AVPP01185 164 aa10.62□□□□□ -0.71
CCDC38-206ENST00000548771 RPIAP49247 311 aa10.62□□□□□ -0.71
CCDC38-206ENST00000548771 CYP4X1Q8N118 509 aa10.62□□□□□ -0.71
CCDC38-206ENST00000548771 C11orf95C9JLR9 678 aaPredicted RBP10.61□□□□□ -0.71
CCDC38-206ENST00000548771 GRIPAP1Q4V328 841 aa10.61□□□□□ -0.71
CCDC38-206ENST00000548771 WFS1O76024 890 aa10.6□□□□□ -0.71
CCDC38-206ENST00000548771 FMNL1O95466 1100 aaPredicted RBP10.6□□□□□ -0.71
CCDC38-206ENST00000548771 RNF19BQ6ZMZ0 732 aa10.6□□□□□ -0.71
CCDC38-206ENST00000548771 CD2BP2O95400 341 aaKnown RBP10.59□□□□□ -0.71
CCDC38-206ENST00000548771 USP46P62068 366 aa10.59□□□□□ -0.71
CCDC38-206ENST00000548771 SSTR3P32745 418 aaPredicted RBP10.58□□□□□ -0.72
CCDC38-206ENST00000548771 NFX1Q12986 1120 aaKnown RBP10.58□□□□□ -0.72
CCDC38-206ENST00000548771 HOXA2O43364 376 aa10.57□□□□□ -0.72
CCDC38-206ENST00000548771 MSS51Q4VC12 460 aa10.57□□□□□ -0.72
CCDC38-206ENST00000548771 LCE2CQ5TA81 110 aa10.57□□□□□ -0.72
CCDC38-206ENST00000548771 HLA-CQ95604 372 aa10.57□□□□□ -0.72
CCDC38-206ENST00000548771 TRIM66O15016 1216 aa10.56□□□□□ -0.72
CCDC38-206ENST00000548771 TTC24A2A3L6 582 aaPredicted RBP10.54□□□□□ -0.72
CCDC38-206ENST00000548771 Q3C1V9 767 aa10.54□□□□□ -0.72
CCDC38-206ENST00000548771 AK7Q96M32 723 aa10.54□□□□□ -0.72
CCDC38-206ENST00000548771 SNRPBP14678 240 aaKnown RBP10.53□□□□□ -0.72
CCDC38-206ENST00000548771 GIGYF2Q6Y7W6 1299 aaKnown RBP10.53□□□□□ -0.72
CCDC38-206ENST00000548771 SMPD1P17405 629 aa10.52□□□□□ -0.73
CCDC38-206ENST00000548771 SMCPP49901 116 aaPredicted RBP10.52□□□□□ -0.73
CCDC38-206ENST00000548771 MMP16P51512 607 aa10.52□□□□□ -0.73
CCDC38-206ENST00000548771 CTC1Q2NKJ3 1217 aa10.52□□□□□ -0.73
CCDC38-206ENST00000548771 GUCA2AQ02747 115 aa10.51□□□□□ -0.73
CCDC38-206ENST00000548771 PARP9Q8IXQ6 854 aa10.51□□□□□ -0.73
CCDC38-206ENST00000548771 SPIRE2Q8WWL2 714 aa10.51□□□□□ -0.73
CCDC38-206ENST00000548771 J3QL48 77 aa10.5□□□□□ -0.73
CCDC38-206ENST00000548771 SLC24A1O60721 1099 aa10.5□□□□□ -0.73
CCDC38-206ENST00000548771 TTLL12Q14166 644 aaPredicted RBP10.5□□□□□ -0.73
CCDC38-206ENST00000548771 USB1Q9BQ65 265 aaKnown RBP10.5□□□□□ -0.73
CCDC38-206ENST00000548771 ZBTB24O43167 697 aaPredicted RBP10.49□□□□□ -0.73
CCDC38-206ENST00000548771 ATP13A2Q9NQ11 1180 aa10.49□□□□□ -0.73
CCDC38-206ENST00000548771 PCDHGC3Q9UN70 934 aa10.49□□□□□ -0.73
CCDC38-206ENST00000548771 DXOO77932 396 aaKnown RBP10.48□□□□□ -0.73
CCDC38-206ENST00000548771 NUTM1Q86Y26 1132 aa10.48□□□□□ -0.73
CCDC38-206ENST00000548771 WNT7AO00755 349 aa10.47□□□□□ -0.73
CCDC38-206ENST00000548771 MS4A1P11836 297 aa10.47□□□□□ -0.73
CCDC38-206ENST00000548771 MRGPRX2Q96LB1 330 aa10.47□□□□□ -0.73
CCDC38-206ENST00000548771 WIPF1O43516 503 aa10.46□□□□□ -0.73
CCDC38-206ENST00000548771 TRIM32Q13049 653 aa10.46□□□□□ -0.73
CCDC38-206ENST00000548771 SNIP1Q8TAD8 396 aaKnown RBP10.46□□□□□ -0.73
CCDC38-206ENST00000548771 HPS1Q92902 700 aa10.46□□□□□ -0.73
CCDC38-206ENST00000548771 SLC24A3Q9HC58 644 aa10.46□□□□□ -0.73
CCDC38-206ENST00000548771 SYMPKQ92797 1274 aaKnown RBP10.45□□□□□ -0.74
CCDC38-206ENST00000548771 BEGAINQ9BUH8 593 aa10.45□□□□□ -0.74
CCDC38-206ENST00000548771 STK17AQ9UEE5 414 aa10.45□□□□□ -0.74
CCDC38-206ENST00000548771 MOXD2PA6NHM9 499 aa10.44□□□□□ -0.74
CCDC38-206ENST00000548771 FDX1P10109 184 aa10.44□□□□□ -0.74
CCDC38-206ENST00000548771 PDE4DQ08499 809 aa10.44□□□□□ -0.74
CCDC38-206ENST00000548771 TERTO14746 1132 aaKnown RBP10.43□□□□□ -0.74
CCDC38-206ENST00000548771 NDUFV2P19404 249 aa10.43□□□□□ -0.74
CCDC38-206ENST00000548771 BCANQ96GW7 911 aa10.43□□□□□ -0.74
CCDC38-206ENST00000548771 GJA5P36382 358 aa10.42□□□□□ -0.74
CCDC38-206ENST00000548771 RETREG3Q86VR2 466 aa10.42□□□□□ -0.74
CCDC38-206ENST00000548771 TRIM47Q96LD4 638 aa10.42□□□□□ -0.74
CCDC38-206ENST00000548771 INSM1Q01101 510 aaPredicted RBP10.4□□□□□ -0.74
CCDC38-206ENST00000548771 TBC1D2Q9BYX2 928 aa10.4□□□□□ -0.74
CCDC38-206ENST00000548771 JUNDP17535 347 aa10.39□□□□□ -0.75
CCDC38-206ENST00000548771 SKOR1P84550 965 aa10.39□□□□□ -0.75
CCDC38-206ENST00000548771 DIXDC1Q155Q3 683 aa10.38□□□□□ -0.75
CCDC38-206ENST00000548771 RSBN1LQ6PCB5 846 aaPredicted RBP10.37□□□□□ -0.75
CCDC38-206ENST00000548771 CCDC24Q8N4L8 307 aa10.37□□□□□ -0.75
CCDC38-206ENST00000548771 SPTLC1O15269 473 aa10.36□□□□□ -0.75
CCDC38-206ENST00000548771 RC3H1Q5TC82 1133 aaKnown RBP10.36□□□□□ -0.75
CCDC38-206ENST00000548771 C6orf229H3BNL8 230 aa10.35□□□□□ -0.75
CCDC38-206ENST00000548771 SENP2Q9HC62 589 aa10.35□□□□□ -0.75
CCDC38-206ENST00000548771 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
CCDC38-206ENST00000548771 SPDYE5A6NIY4 337 aa10.33□□□□□ -0.76
CCDC38-206ENST00000548771 MTMR2Q13614 643 aa10.33□□□□□ -0.76
CCDC38-206ENST00000548771 DESI1Q6ICB0 168 aa10.33□□□□□ -0.76
CCDC38-206ENST00000548771 PTCRAQ6ISU1 281 aaPredicted RBP10.33□□□□□ -0.76
CCDC38-206ENST00000548771 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
CCDC38-206ENST00000548771 PRR7Q8TB68 274 aa10.32□□□□□ -0.76
CCDC38-206ENST00000548771 ALDH1A1P00352 501 aa10.31□□□□□ -0.76
CCDC38-206ENST00000548771 BMP1P13497 986 aa10.31□□□□□ -0.76
CCDC38-206ENST00000548771 MYSM1Q5VVJ2 828 aa10.31□□□□□ -0.76
CCDC38-206ENST00000548771 RIC3Q7Z5B4 369 aa10.31□□□□□ -0.76
CCDC38-206ENST00000548771 NUDT12Q9BQG2 462 aa10.31□□□□□ -0.76
CCDC38-206ENST00000548771 VEGFBP49765 207 aa10.3□□□□□ -0.76
CCDC38-206ENST00000548771 PTPRNQ16849 979 aa10.3□□□□□ -0.76
CCDC38-206ENST00000548771 PRPF38BQ5VTL8 546 aaKnown RBP10.3□□□□□ -0.76
CCDC38-206ENST00000548771 EVA1BQ9NVM1 165 aa10.3□□□□□ -0.76
CCDC38-206ENST00000548771 HRCP23327 699 aa10.29□□□□□ -0.76
CCDC38-206ENST00000548771 LIMD1Q9UGP4 676 aa10.29□□□□□ -0.76
CCDC38-206ENST00000548771 GMPRP36959 345 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms