RNA–Protein interactions for RNA: ENST00000548516.5

LETMD1-217, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 850 nt, Biotype processed transcript.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-217ENST00000548516 RGL3Q3MIN7 710 aa14.06□□□□□ -0.16
LETMD1-217ENST00000548516 WAPLQ7Z5K2 1190 aa14.06□□□□□ -0.16
LETMD1-217ENST00000548516 ZRANB1Q9UGI0 708 aa14.06□□□□□ -0.16
LETMD1-217ENST00000548516 NPHP3Q7Z494 1330 aa14.06□□□□□ -0.16
LETMD1-217ENST00000548516 PTCH1Q13635 1447 aa14.06□□□□□ -0.16
LETMD1-217ENST00000548516 NAIPQ13075 1403 aa14.05□□□□□ -0.16
LETMD1-217ENST00000548516 HFM1A2PYH4 1435 aa14.04□□□□□ -0.16
LETMD1-217ENST00000548516 ADGRF5Q8IZF2 1346 aa14.03□□□□□ -0.16
LETMD1-217ENST00000548516 ATRNO75882 1429 aa14.02□□□□□ -0.16
LETMD1-217ENST00000548516 TMEM132EQ6IEE7 984 aa14.02□□□□□ -0.17
LETMD1-217ENST00000548516 GJD4Q96KN9 370 aaPredicted RBP14.02□□□□□ -0.17
LETMD1-217ENST00000548516 KIF1BO60333 1816 aa14.01□□□□□ -0.17
LETMD1-217ENST00000548516 RRBP1Q9P2E9 1410 aaKnown RBP14.01□□□□□ -0.17
LETMD1-217ENST00000548516 HAP1P54257 671 aaPredicted RBP14□□□□□ -0.17
LETMD1-217ENST00000548516 LRPPRCP42704 1394 aaKnown RBP13.99□□□□□ -0.17
LETMD1-217ENST00000548516 SRCAPQ6ZRS2 3230 aa13.99□□□□□ -0.17
LETMD1-217ENST00000548516 CCDC125Q86Z20 511 aa13.99□□□□□ -0.17
LETMD1-217ENST00000548516 LMOD2Q6P5Q4 547 aa13.98□□□□□ -0.17
LETMD1-217ENST00000548516 KRT28Q7Z3Y7 464 aa13.98□□□□□ -0.17
LETMD1-217ENST00000548516 UNC5CLQ8IV45 518 aa13.98□□□□□ -0.17
LETMD1-217ENST00000548516 CCDC9Q9Y3X0 531 aaKnown RBP13.98□□□□□ -0.17
LETMD1-217ENST00000548516 MYOM2P54296 1465 aa13.98□□□□□ -0.17
LETMD1-217ENST00000548516 BCL9LQ86UU0 1499 aa13.98□□□□□ -0.17
LETMD1-217ENST00000548516 PLEKHH1Q9ULM0 1364 aa13.97□□□□□ -0.17
LETMD1-217ENST00000548516 PXDNQ92626 1479 aa13.96□□□□□ -0.17
LETMD1-217ENST00000548516 CABLES1Q8TDN4 633 aa13.96□□□□□ -0.17
LETMD1-217ENST00000548516 LAMC1P11047 1609 aa13.96□□□□□ -0.17
LETMD1-217ENST00000548516 SPATA31A3Q5VYP0 1347 aa13.95□□□□□ -0.18
LETMD1-217ENST00000548516 SAFB2Q14151 953 aaKnown RBP eCLIP13.95□□□□□ -0.18
LETMD1-217ENST00000548516 DEFB132Q7Z7B7 95 aa13.95□□□□□ -0.18
LETMD1-217ENST00000548516 CCDC144AA2RUR9 1427 aa13.94□□□□□ -0.18
LETMD1-217ENST00000548516 SF3B2Q13435 895 aaKnown RBP13.94□□□□□ -0.18
LETMD1-217ENST00000548516 PRAG1Q86YV5 1406 aa13.94□□□□□ -0.18
LETMD1-217ENST00000548516 SEPT12Q8IYM1 358 aa13.94□□□□□ -0.18
LETMD1-217ENST00000548516 MPHOSPH9Q99550 1183 aa13.94□□□□□ -0.18
LETMD1-217ENST00000548516 A0A0G2JS52 829 aa13.93□□□□□ -0.18
LETMD1-217ENST00000548516 MYT1Q01538 1121 aa13.93□□□□□ -0.18
LETMD1-217ENST00000548516 PSME1Q06323 249 aa13.93□□□□□ -0.18
LETMD1-217ENST00000548516 PHF8Q9UPP1 1060 aa13.93□□□□□ -0.18
LETMD1-217ENST00000548516 ABCC11Q96J66 1382 aa13.93□□□□□ -0.18
LETMD1-217ENST00000548516 CDC42BPGQ6DT37 1551 aa13.92□□□□□ -0.18
LETMD1-217ENST00000548516 COL22A1Q8NFW1 1626 aaPredicted RBP13.92□□□□□ -0.18
LETMD1-217ENST00000548516 ANKRD30BQ9BXX2 1392 aa13.92□□□□□ -0.18
LETMD1-217ENST00000548516 RALGAPBQ86X10 1494 aa13.92□□□□□ -0.18
LETMD1-217ENST00000548516 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
LETMD1-217ENST00000548516 PMFBP1Q8TBY8 1022 aa13.9□□□□□ -0.18
LETMD1-217ENST00000548516 PPLO60437 1756 aa13.9□□□□□ -0.18
LETMD1-217ENST00000548516 YTHDC2Q9H6S0 1430 aaKnown RBP13.9□□□□□ -0.19
LETMD1-217ENST00000548516 VPS72Q15906 364 aa13.89□□□□□ -0.19
LETMD1-217ENST00000548516 POGKQ9P215 609 aa13.89□□□□□ -0.19
LETMD1-217ENST00000548516 SLIT2O94813 1529 aa13.89□□□□□ -0.19
LETMD1-217ENST00000548516 TECPR2O15040 1411 aa13.89□□□□□ -0.19
LETMD1-217ENST00000548516 BLMP54132 1417 aaPredicted RBP13.89□□□□□ -0.19
LETMD1-217ENST00000548516 KRT27Q7Z3Y8 459 aa13.88□□□□□ -0.19
LETMD1-217ENST00000548516 PRAM1Q96QH2 718 aa13.88□□□□□ -0.19
LETMD1-217ENST00000548516 C14orf93Q9H972 538 aaKnown RBP13.88□□□□□ -0.19
LETMD1-217ENST00000548516 SPATA31E1Q6ZUB1 1445 aa13.88□□□□□ -0.19
LETMD1-217ENST00000548516 DHX57Q6P158 1386 aaKnown RBP13.87□□□□□ -0.19
LETMD1-217ENST00000548516 FAM83GA6ND36 823 aa13.87□□□□□ -0.19
LETMD1-217ENST00000548516 SIRT1Q96EB6 747 aa13.87□□□□□ -0.19
LETMD1-217ENST00000548516 PSDA5PKW4 1024 aaPredicted RBP13.86□□□□□ -0.19
LETMD1-217ENST00000548516 EP400Q96L91 3159 aa13.85□□□□□ -0.19
LETMD1-217ENST00000548516 GLI3P10071 1580 aa13.85□□□□□ -0.19
LETMD1-217ENST00000548516 PIK3C2GO75747 1445 aa13.85□□□□□ -0.19
LETMD1-217ENST00000548516 TNS3Q68CZ2 1445 aa13.85□□□□□ -0.19
LETMD1-217ENST00000548516 FAM98CQ17RN3 349 aaKnown RBP13.85□□□□□ -0.19
LETMD1-217ENST00000548516 HIRIP3Q9BW71 556 aaPredicted RBP13.84□□□□□ -0.19
LETMD1-217ENST00000548516 ONECUT3O60422 494 aaPredicted RBP13.83□□□□□ -0.2
LETMD1-217ENST00000548516 BAG6P46379 1132 aa13.83□□□□□ -0.2
LETMD1-217ENST00000548516 BTG4Q9NY30 223 aa13.83□□□□□ -0.2
LETMD1-217ENST00000548516 MARF1Q9Y4F3 1742 aaKnown RBP13.83□□□□□ -0.2
LETMD1-217ENST00000548516 SBNO1A3KN83 1393 aa13.83□□□□□ -0.2
LETMD1-217ENST00000548516 ARHGEF10O15013 1369 aa13.83□□□□□ -0.2
LETMD1-217ENST00000548516 FAM182BQ5T319 152 aa13.82□□□□□ -0.2
LETMD1-217ENST00000548516 TRAK1Q9UPV9 953 aa13.82□□□□□ -0.2
LETMD1-217ENST00000548516 MINK1Q8N4C8 1332 aaPredicted RBP13.82□□□□□ -0.2
LETMD1-217ENST00000548516 FMN2Q9NZ56 1722 aa13.81□□□□□ -0.2
LETMD1-217ENST00000548516 PAK3O75914 559 aaPredicted RBP13.81□□□□□ -0.2
LETMD1-217ENST00000548516 KDM2AQ9Y2K7 1162 aa13.81□□□□□ -0.2
LETMD1-217ENST00000548516 USP32Q8NFA0 1604 aa13.81□□□□□ -0.2
LETMD1-217ENST00000548516 KIF1AQ12756 1690 aa13.8□□□□□ -0.2
LETMD1-217ENST00000548516 EN1Q05925 392 aaPredicted RBP13.8□□□□□ -0.2
LETMD1-217ENST00000548516 NGDNQ8NEJ9 315 aaKnown RBP13.8□□□□□ -0.2
LETMD1-217ENST00000548516 GPRASP1Q5JY77 1395 aa13.8□□□□□ -0.2
LETMD1-217ENST00000548516 ACIN1Q9UKV3 1341 aaKnown RBP13.79□□□□□ -0.2
LETMD1-217ENST00000548516 NRXN1Q9ULB1 1477 aa13.79□□□□□ -0.2
LETMD1-217ENST00000548516 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
LETMD1-217ENST00000548516 BRWD3Q6RI45 1802 aa13.77□□□□□ -0.21
LETMD1-217ENST00000548516 KNDC1Q76NI1 1749 aa13.77□□□□□ -0.21
LETMD1-217ENST00000548516 IFT172Q9UG01 1749 aa13.77□□□□□ -0.21
LETMD1-217ENST00000548516 HRCP23327 699 aa13.76□□□□□ -0.21
LETMD1-217ENST00000548516 R3HDM1Q15032 1099 aaKnown RBP13.76□□□□□ -0.21
LETMD1-217ENST00000548516 PRDM11Q9NQV5 511 aa13.76□□□□□ -0.21
LETMD1-217ENST00000548516 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
LETMD1-217ENST00000548516 ANKARQ7Z5J8 1434 aa13.75□□□□□ -0.21
LETMD1-217ENST00000548516 PRR36Q9H6K5 1346 aa13.75□□□□□ -0.21
LETMD1-217ENST00000548516 WASLO00401 505 aaPredicted RBP13.75□□□□□ -0.21
LETMD1-217ENST00000548516 DCAF11Q8TEB1 546 aa13.75□□□□□ -0.21
LETMD1-217ENST00000548516 STRN4Q9NRL3 753 aa13.75□□□□□ -0.21
LETMD1-217ENST00000548516 SPATA31A5Q5VU36 1347 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms