RNA–Protein interactions for RNA: ENST00000548357.2

SNX29P1-201, Transcript of sorting nexin 29 pseudogene 1, humanhuman

BASIC

Gene SNX29P1, Length 1,007 nt, Biotype unprocessed pseudogene, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29P1-201ENST00000548357 PLEKHH1Q9ULM0 1364 aa22.8■■□□□ 1.24
SNX29P1-201ENST00000548357 PIK3C2GO75747 1445 aa22.8■■□□□ 1.24
SNX29P1-201ENST00000548357 TECPR2O15040 1411 aa22.79■■□□□ 1.24
SNX29P1-201ENST00000548357 SOS2Q07890 1332 aaPredicted RBP22.78■■□□□ 1.24
SNX29P1-201ENST00000548357 PXDNQ92626 1479 aa22.77■■□□□ 1.24
SNX29P1-201ENST00000548357 TMEM132EQ6IEE7 984 aa22.76■■□□□ 1.23
SNX29P1-201ENST00000548357 WAPLQ7Z5K2 1190 aa22.76■■□□□ 1.23
SNX29P1-201ENST00000548357 C8orf37Q96NL8 207 aa22.76■■□□□ 1.23
SNX29P1-201ENST00000548357 STK26Q9P289 416 aa22.76■■□□□ 1.23
SNX29P1-201ENST00000548357 LRPPRCP42704 1394 aaKnown RBP22.76■■□□□ 1.23
SNX29P1-201ENST00000548357 RGS12O14924 1447 aa22.75■■□□□ 1.23
SNX29P1-201ENST00000548357 CDK12Q9NYV4 1490 aaPredicted RBP22.74■■□□□ 1.23
SNX29P1-201ENST00000548357 ANKRD30BQ9BXX2 1392 aa22.74■■□□□ 1.23
SNX29P1-201ENST00000548357 ADAMTS2O95450 1211 aa22.73■■□□□ 1.23
SNX29P1-201ENST00000548357 RXRBP28702 533 aa22.73■■□□□ 1.23
SNX29P1-201ENST00000548357 NRXN1Q9ULB1 1477 aa22.73■■□□□ 1.23
SNX29P1-201ENST00000548357 UPF1Q92900 1129 aaKnown RBP eCLIP22.72■■□□□ 1.23
SNX29P1-201ENST00000548357 NUTM2FA1L443 756 aa22.71■■□□□ 1.23
SNX29P1-201ENST00000548357 XPCQ01831 940 aaPredicted RBP22.71■■□□□ 1.23
SNX29P1-201ENST00000548357 YTHDC2Q9H6S0 1430 aaKnown RBP22.71■■□□□ 1.23
SNX29P1-201ENST00000548357 MYOM2P54296 1465 aa22.71■■□□□ 1.23
SNX29P1-201ENST00000548357 ABCC11Q96J66 1382 aa22.7■■□□□ 1.22
SNX29P1-201ENST00000548357 KIF1AQ12756 1690 aa22.69■■□□□ 1.22
SNX29P1-201ENST00000548357 RAB3GAP2Q9H2M9 1393 aa22.69■■□□□ 1.22
SNX29P1-201ENST00000548357 ESCO1Q5FWF5 840 aa22.68■■□□□ 1.22
SNX29P1-201ENST00000548357 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
SNX29P1-201ENST00000548357 QTRT2Q9H974 415 aaKnown RBP22.66■■□□□ 1.22
SNX29P1-201ENST00000548357 ABCA3Q99758 1704 aa22.65■■□□□ 1.22
SNX29P1-201ENST00000548357 FOXO3O43524 673 aa22.64■■□□□ 1.21
SNX29P1-201ENST00000548357 CFAP70Q5T0N1 1121 aa22.64■■□□□ 1.21
SNX29P1-201ENST00000548357 NGLY1Q96IV0 654 aa22.63■■□□□ 1.21
SNX29P1-201ENST00000548357 EP400Q96L91 3159 aa22.63■■□□□ 1.21
SNX29P1-201ENST00000548357 NPHP3Q7Z494 1330 aa22.62■■□□□ 1.21
SNX29P1-201ENST00000548357 C14orf93Q9H972 538 aaKnown RBP22.62■■□□□ 1.21
SNX29P1-201ENST00000548357 ADGRB1O14514 1584 aa22.62■■□□□ 1.21
SNX29P1-201ENST00000548357 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.62■■□□□ 1.21
SNX29P1-201ENST00000548357 ATRNO75882 1429 aa22.61■■□□□ 1.21
SNX29P1-201ENST00000548357 RBM6P78332 1123 aaKnown RBP22.61■■□□□ 1.21
SNX29P1-201ENST00000548357 USP21Q9UK80 565 aa22.59■■□□□ 1.21
SNX29P1-201ENST00000548357 BCL9LQ86UU0 1499 aa22.59■■□□□ 1.21
SNX29P1-201ENST00000548357 BRWD3Q6RI45 1802 aa22.58■■□□□ 1.21
SNX29P1-201ENST00000548357 ADGRB2O60241 1585 aa22.58■■□□□ 1.2
SNX29P1-201ENST00000548357 DLC1Q96QB1 1528 aa22.57■■□□□ 1.2
SNX29P1-201ENST00000548357 FNBP4Q8N3X1 1017 aaPredicted RBP22.57■■□□□ 1.2
SNX29P1-201ENST00000548357 PLCH1Q4KWH8 1693 aa22.57■■□□□ 1.2
SNX29P1-201ENST00000548357 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
SNX29P1-201ENST00000548357 TRPM3Q9HCF6 1732 aaPredicted RBP22.56■■□□□ 1.2
SNX29P1-201ENST00000548357 GLI3P10071 1580 aa22.55■■□□□ 1.2
SNX29P1-201ENST00000548357 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
SNX29P1-201ENST00000548357 DHX57Q6P158 1386 aaKnown RBP22.53■■□□□ 1.2
SNX29P1-201ENST00000548357 PRAM1Q96QH2 718 aa22.53■■□□□ 1.2
SNX29P1-201ENST00000548357 SPATA31A3Q5VYP0 1347 aa22.53■■□□□ 1.2
SNX29P1-201ENST00000548357 SIRT1Q96EB6 747 aa22.52■■□□□ 1.2
SNX29P1-201ENST00000548357 TRPC5Q9UL62 973 aaPredicted RBP22.51■■□□□ 1.19
SNX29P1-201ENST00000548357 TNS3Q68CZ2 1445 aa22.5■■□□□ 1.19
SNX29P1-201ENST00000548357 ALS2Q96Q42 1657 aa22.5■■□□□ 1.19
SNX29P1-201ENST00000548357 KRT28Q7Z3Y7 464 aa22.5■■□□□ 1.19
SNX29P1-201ENST00000548357 CRYBG1Q9Y4K1 1723 aa22.5■■□□□ 1.19
SNX29P1-201ENST00000548357 SLIT2O94813 1529 aa22.5■■□□□ 1.19
SNX29P1-201ENST00000548357 PHF8Q9UPP1 1060 aa22.48■■□□□ 1.19
SNX29P1-201ENST00000548357 NWD2Q9ULI1 1742 aa22.48■■□□□ 1.19
SNX29P1-201ENST00000548357 NRAPQ86VF7 1730 aa22.47■■□□□ 1.19
SNX29P1-201ENST00000548357 PLEKHG5O94827 1062 aa22.46■■□□□ 1.19
SNX29P1-201ENST00000548357 CABLES1Q8TDN4 633 aa22.46■■□□□ 1.19
SNX29P1-201ENST00000548357 KDM2AQ9Y2K7 1162 aa22.46■■□□□ 1.19
SNX29P1-201ENST00000548357 ACIN1Q9UKV3 1341 aaKnown RBP22.46■■□□□ 1.19
SNX29P1-201ENST00000548357 HIRIP3Q9BW71 556 aaPredicted RBP22.45■■□□□ 1.18
SNX29P1-201ENST00000548357 TRAK1Q9UPV9 953 aa22.45■■□□□ 1.18
SNX29P1-201ENST00000548357 RALGAPBQ86X10 1494 aa22.45■■□□□ 1.18
SNX29P1-201ENST00000548357 PRR36Q9H6K5 1346 aa22.44■■□□□ 1.18
SNX29P1-201ENST00000548357 ANKARQ7Z5J8 1434 aa22.43■■□□□ 1.18
SNX29P1-201ENST00000548357 ATAD2Q6PL18 1390 aa22.43■■□□□ 1.18
SNX29P1-201ENST00000548357 PMFBP1Q8TBY8 1022 aa22.43■■□□□ 1.18
SNX29P1-201ENST00000548357 DCAF11Q8TEB1 546 aa22.43■■□□□ 1.18
SNX29P1-201ENST00000548357 TULP4Q9NRJ4 1543 aa22.42■■□□□ 1.18
SNX29P1-201ENST00000548357 MINK1Q8N4C8 1332 aaPredicted RBP22.42■■□□□ 1.18
SNX29P1-201ENST00000548357 POGKQ9P215 609 aa22.42■■□□□ 1.18
SNX29P1-201ENST00000548357 ITSN1Q15811 1721 aa22.42■■□□□ 1.18
SNX29P1-201ENST00000548357 SBNO1A3KN83 1393 aa22.41■■□□□ 1.18
SNX29P1-201ENST00000548357 GJD4Q96KN9 370 aaPredicted RBP22.41■■□□□ 1.18
SNX29P1-201ENST00000548357 SRCAPQ6ZRS2 3230 aa22.39■■□□□ 1.18
SNX29P1-201ENST00000548357 TOPAZ1Q8N9V7 1692 aa22.39■■□□□ 1.17
SNX29P1-201ENST00000548357 UNC5CLQ8IV45 518 aa22.38■■□□□ 1.17
SNX29P1-201ENST00000548357 KIAA1210Q9ULL0 1709 aa22.37■■□□□ 1.17
SNX29P1-201ENST00000548357 LMOD2Q6P5Q4 547 aa22.36■■□□□ 1.17
SNX29P1-201ENST00000548357 ATP7BP35670 1465 aa22.35■■□□□ 1.17
SNX29P1-201ENST00000548357 PSME1Q06323 249 aa22.35■■□□□ 1.17
SNX29P1-201ENST00000548357 PHRF1Q9P1Y6 1649 aaKnown RBP22.35■■□□□ 1.17
SNX29P1-201ENST00000548357 COL14A1Q05707 1796 aaKnown RBP22.34■■□□□ 1.17
SNX29P1-201ENST00000548357 ARHGEF10O15013 1369 aa22.34■■□□□ 1.17
SNX29P1-201ENST00000548357 WASLO00401 505 aaPredicted RBP22.32■■□□□ 1.16
SNX29P1-201ENST00000548357 HRCP23327 699 aa22.32■■□□□ 1.16
SNX29P1-201ENST00000548357 HAP1P54257 671 aaPredicted RBP22.31■■□□□ 1.16
SNX29P1-201ENST00000548357 FAM83GA6ND36 823 aa22.3■■□□□ 1.16
SNX29P1-201ENST00000548357 VPS72Q15906 364 aa22.28■■□□□ 1.16
SNX29P1-201ENST00000548357 QRICH2Q9H0J4 1663 aa22.26■■□□□ 1.15
SNX29P1-201ENST00000548357 EIF3AQ14152 1382 aaKnown RBP22.26■■□□□ 1.15
SNX29P1-201ENST00000548357 SEPT12Q8IYM1 358 aa22.26■■□□□ 1.15
SNX29P1-201ENST00000548357 GPRASP1Q5JY77 1395 aa22.25■■□□□ 1.15
SNX29P1-201ENST00000548357 THSD7AQ9UPZ6 1657 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms