RNA–Protein interactions for RNA: ENST00000548092.5

TRAFD1-204, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-204ENST00000548092 FMNL1O95466 1100 aaPredicted RBP8.43□□□□□ -1.06
TRAFD1-204ENST00000548092 DCAF1Q9Y4B6 1507 aa8.43□□□□□ -1.06
TRAFD1-204ENST00000548092 CLCN1P35523 988 aa8.42□□□□□ -1.06
TRAFD1-204ENST00000548092 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
TRAFD1-204ENST00000548092 Q6ZNB5 142 aa8.42□□□□□ -1.06
TRAFD1-204ENST00000548092 TRIM67Q6ZTA4 783 aa8.42□□□□□ -1.06
TRAFD1-204ENST00000548092 PRDM9Q9NQV7 894 aa8.42□□□□□ -1.06
TRAFD1-204ENST00000548092 SALL2Q9Y467 1007 aaPredicted RBP8.42□□□□□ -1.06
TRAFD1-204ENST00000548092 GUCA2AQ02747 115 aa8.41□□□□□ -1.06
TRAFD1-204ENST00000548092 LAMC3Q9Y6N6 1575 aa8.4□□□□□ -1.06
TRAFD1-204ENST00000548092 SSTR3P32745 418 aaPredicted RBP8.4□□□□□ -1.06
TRAFD1-204ENST00000548092 GRIPAP1Q4V328 841 aa8.4□□□□□ -1.06
TRAFD1-204ENST00000548092 HOXA2O43364 376 aa8.39□□□□□ -1.07
TRAFD1-204ENST00000548092 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
TRAFD1-204ENST00000548092 PDZRN3Q9UPQ7 1066 aa8.39□□□□□ -1.07
TRAFD1-204ENST00000548092 WDR62O43379 1518 aa8.39□□□□□ -1.07
TRAFD1-204ENST00000548092 NRG2O14511 850 aaPredicted RBP8.38□□□□□ -1.07
TRAFD1-204ENST00000548092 LAPTM4AQ15012 233 aa8.38□□□□□ -1.07
TRAFD1-204ENST00000548092 AMHR2Q16671 573 aa8.38□□□□□ -1.07
TRAFD1-204ENST00000548092 FCF1Q9Y324 198 aaKnown RBP8.38□□□□□ -1.07
TRAFD1-204ENST00000548092 TRIM66O15016 1216 aa8.37□□□□□ -1.07
TRAFD1-204ENST00000548092 CYB5RLQ6IPT4 315 aa8.37□□□□□ -1.07
TRAFD1-204ENST00000548092 SYMPKQ92797 1274 aaKnown RBP8.37□□□□□ -1.07
TRAFD1-204ENST00000548092 HMGXB3Q12766 1538 aa8.37□□□□□ -1.07
TRAFD1-204ENST00000548092 MRC2Q9UBG0 1479 aa8.37□□□□□ -1.07
TRAFD1-204ENST00000548092 PDS5BQ9NTI5 1447 aa8.37□□□□□ -1.07
TRAFD1-204ENST00000548092 TTLL12Q14166 644 aaPredicted RBP8.36□□□□□ -1.07
TRAFD1-204ENST00000548092 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
TRAFD1-204ENST00000548092 ARAP1Q96P48 1450 aa8.36□□□□□ -1.07
TRAFD1-204ENST00000548092 ZCCHC6Q5VYS8 1495 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-204ENST00000548092 ATAD2BQ9ULI0 1458 aa8.35□□□□□ -1.07
TRAFD1-204ENST00000548092 GDF9O60383 454 aa8.35□□□□□ -1.07
TRAFD1-204ENST00000548092 USP46P62068 366 aa8.35□□□□□ -1.07
TRAFD1-204ENST00000548092 ZNF697Q5TEC3 545 aa8.35□□□□□ -1.07
TRAFD1-204ENST00000548092 GIGYF2Q6Y7W6 1299 aaKnown RBP8.35□□□□□ -1.07
TRAFD1-204ENST00000548092 SPIRE2Q8WWL2 714 aa8.35□□□□□ -1.07
TRAFD1-204ENST00000548092 PCDHGC3Q9UN70 934 aa8.35□□□□□ -1.07
TRAFD1-204ENST00000548092 Q3C1V9 767 aa8.34□□□□□ -1.07
TRAFD1-204ENST00000548092 TRAF7Q6Q0C0 670 aa8.34□□□□□ -1.07
TRAFD1-204ENST00000548092 NUTM1Q86Y26 1132 aa8.34□□□□□ -1.07
TRAFD1-204ENST00000548092 USB1Q9BQ65 265 aaKnown RBP8.34□□□□□ -1.07
TRAFD1-204ENST00000548092 NDUFV2P19404 249 aa8.33□□□□□ -1.08
TRAFD1-204ENST00000548092 MMP16P51512 607 aa8.33□□□□□ -1.08
TRAFD1-204ENST00000548092 PARP9Q8IXQ6 854 aa8.33□□□□□ -1.08
TRAFD1-204ENST00000548092 AK7Q96M32 723 aa8.33□□□□□ -1.08
TRAFD1-204ENST00000548092 TNFRSF10AO00220 468 aa8.32□□□□□ -1.08
TRAFD1-204ENST00000548092 SLC24A3Q9HC58 644 aa8.32□□□□□ -1.08
TRAFD1-204ENST00000548092 PKD2L1Q9P0L9 805 aa8.32□□□□□ -1.08
TRAFD1-204ENST00000548092 MOXD2PA6NHM9 499 aa8.31□□□□□ -1.08
TRAFD1-204ENST00000548092 MS4A1P11836 297 aa8.31□□□□□ -1.08
TRAFD1-204ENST00000548092 RPIAP49247 311 aa8.31□□□□□ -1.08
TRAFD1-204ENST00000548092 BEGAINQ9BUH8 593 aa8.31□□□□□ -1.08
TRAFD1-204ENST00000548092 DXOO77932 396 aaKnown RBP8.3□□□□□ -1.08
TRAFD1-204ENST00000548092 FDX1P10109 184 aa8.3□□□□□ -1.08
TRAFD1-204ENST00000548092 PRR20EP86478 221 aa8.3□□□□□ -1.08
TRAFD1-204ENST00000548092 PRR20CP86479 221 aa8.3□□□□□ -1.08
TRAFD1-204ENST00000548092 PRR20DP86480 221 aa8.3□□□□□ -1.08
TRAFD1-204ENST00000548092 PRR20BP86481 221 aa8.3□□□□□ -1.08
TRAFD1-204ENST00000548092 PRR20AP86496 221 aa8.3□□□□□ -1.08
TRAFD1-204ENST00000548092 FOXC1Q12948 553 aa8.3□□□□□ -1.08
TRAFD1-204ENST00000548092 CD2BP2O95400 341 aaKnown RBP8.28□□□□□ -1.08
TRAFD1-204ENST00000548092 PDE4DQ08499 809 aa8.27□□□□□ -1.09
TRAFD1-204ENST00000548092 CCDC24Q8N4L8 307 aa8.26□□□□□ -1.09
TRAFD1-204ENST00000548092 TBC1D2Q9BYX2 928 aa8.26□□□□□ -1.09
TRAFD1-204ENST00000548092 C6orf229H3BNL8 230 aa8.25□□□□□ -1.09
TRAFD1-204ENST00000548092 ZBTB24O43167 697 aaPredicted RBP8.25□□□□□ -1.09
TRAFD1-204ENST00000548092 SLC24A1O60721 1099 aa8.25□□□□□ -1.09
TRAFD1-204ENST00000548092 RETREG3Q86VR2 466 aa8.25□□□□□ -1.09
TRAFD1-204ENST00000548092 PCDHB15Q9Y5E8 787 aa8.25□□□□□ -1.09
TRAFD1-204ENST00000548092 JUNDP17535 347 aa8.24□□□□□ -1.09
TRAFD1-204ENST00000548092 MYT1Q01538 1121 aa8.24□□□□□ -1.09
TRAFD1-204ENST00000548092 PTCRAQ6ISU1 281 aaPredicted RBP8.24□□□□□ -1.09
TRAFD1-204ENST00000548092 DGAT1O75907 488 aa8.23□□□□□ -1.09
TRAFD1-204ENST00000548092 TRIM32Q13049 653 aa8.23□□□□□ -1.09
TRAFD1-204ENST00000548092 TOR4AQ9NXH8 423 aa8.23□□□□□ -1.09
TRAFD1-204ENST00000548092 FAM187AA6NFU0 413 aa8.22□□□□□ -1.09
TRAFD1-204ENST00000548092 PKDCCQ504Y2 493 aa8.22□□□□□ -1.09
TRAFD1-204ENST00000548092 RSBN1LQ6PCB5 846 aaPredicted RBP8.22□□□□□ -1.09
TRAFD1-204ENST00000548092 BAZ1BQ9UIG0 1483 aaKnown RBP8.21□□□□□ -1.09
TRAFD1-204ENST00000548092 SKOR1P84550 965 aa8.21□□□□□ -1.1
TRAFD1-204ENST00000548092 PRR7Q8TB68 274 aa8.2□□□□□ -1.1
TRAFD1-204ENST00000548092 BCANQ96GW7 911 aa8.2□□□□□ -1.1
TRAFD1-204ENST00000548092 NUDT12Q9BQG2 462 aa8.2□□□□□ -1.1
TRAFD1-204ENST00000548092 RSF1Q96T23 1441 aaPredicted RBP8.2□□□□□ -1.1
TRAFD1-204ENST00000548092 LMTK3Q96Q04 1460 aa8.19□□□□□ -1.1
TRAFD1-204ENST00000548092 SPTLC1O15269 473 aa8.19□□□□□ -1.1
TRAFD1-204ENST00000548092 MTMR2Q13614 643 aa8.19□□□□□ -1.1
TRAFD1-204ENST00000548092 RIC3Q7Z5B4 369 aa8.19□□□□□ -1.1
TRAFD1-204ENST00000548092 MRGPRX2Q96LB1 330 aa8.19□□□□□ -1.1
TRAFD1-204ENST00000548092 POTECB2RU33 542 aa8.18□□□□□ -1.1
TRAFD1-204ENST00000548092 WNT7AO00755 349 aa8.18□□□□□ -1.1
TRAFD1-204ENST00000548092 HRCP23327 699 aa8.18□□□□□ -1.1
TRAFD1-204ENST00000548092 CYP4X1Q8N118 509 aa8.18□□□□□ -1.1
TRAFD1-204ENST00000548092 CABLES1Q8TDN4 633 aa8.18□□□□□ -1.1
TRAFD1-204ENST00000548092 LIMD1Q9UGP4 676 aa8.18□□□□□ -1.1
TRAFD1-204ENST00000548092 CFAP99D6REC4 459 aa8.17□□□□□ -1.1
TRAFD1-204ENST00000548092 ST8SIA5O15466 376 aa8.17□□□□□ -1.1
TRAFD1-204ENST00000548092 GJA5P36382 358 aa8.17□□□□□ -1.1
TRAFD1-204ENST00000548092 DIXDC1Q155Q3 683 aa8.17□□□□□ -1.1
TRAFD1-204ENST00000548092 MYSM1Q5VVJ2 828 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms