RNA–Protein interactions for RNA: ENST00000548025.5

MARF1-205, Transcript of meiosis regulator and mRNA stability factor 1, human

APPRIS ALT1 TSL 1 (best) BASIC

Gene MARF1, Length 5,891 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MARF1-205	ENST00000548025	HDAC9	Q9UKV0	1011 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	GRM1	Q13255	1194 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	GRIN2A	Q12879	1464 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	HSP90AB4P	Q58FF6	505 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	KRT28	Q7Z3Y7	464 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	SLF2	Q8IX21	1173 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	PHF8	Q9UPP1	1060 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	DAPK1	P53355	1430 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	HECW1	Q76N89	1606 aa		13.19	□□□□□ -0.3
MARF1-205	ENST00000548025	CCDC47	Q96A33	483 aa	Known RBP	13.18	□□□□□ -0.3
MARF1-205	ENST00000548025	CRBN	Q96SW2	442 aa		13.18	□□□□□ -0.3
MARF1-205	ENST00000548025	G3BP1	Q13283	466 aa	Known RBP eCLIP	13.18	□□□□□ -0.3
MARF1-205	ENST00000548025	JDP2	Q8WYK2	163 aa		13.18	□□□□□ -0.3
MARF1-205	ENST00000548025	TRIM21	P19474	475 aa	Known RBP	13.17	□□□□□ -0.3
MARF1-205	ENST00000548025	FAM177B	A6PVY3	158 aa		13.17	□□□□□ -0.3
MARF1-205	ENST00000548025	TRDN	Q13061	729 aa		13.17	□□□□□ -0.3
MARF1-205	ENST00000548025	HSP90AB3P	Q58FF7	597 aa		13.17	□□□□□ -0.3
MARF1-205	ENST00000548025	EFCAB5	A4FU69	1503 aa		13.16	□□□□□ -0.3
MARF1-205	ENST00000548025	TRO	Q12816	1431 aa	Predicted RBP	13.16	□□□□□ -0.3
MARF1-205	ENST00000548025	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	13.16	□□□□□ -0.3
MARF1-205	ENST00000548025	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.16	□□□□□ -0.3	2e-7	■■□□□ 12.6
MARF1-205	ENST00000548025	TFCP2L1	Q9NZI6	479 aa		13.16	□□□□□ -0.3
MARF1-205	ENST00000548025	IGHMBP2	P38935	993 aa	Known RBP	13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	CEBPA	P49715	358 aa	Predicted RBP	13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	HSPA2	P54652	639 aa		13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	ST20-MTHFS	A0A0A6YYL1	179 aa		13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	MTHFS	P49914	203 aa		13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	APP	P05067	770 aa		13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	MPHOSPH8	Q99549	860 aa		13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	AMOTL2	Q9Y2J4	779 aa		13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	CDK19	Q9BWU1	502 aa		13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	TSPYL4	Q9UJ04	414 aa		13.15	□□□□□ -0.3
MARF1-205	ENST00000548025	MFAP1	P55081	439 aa	Known RBP	13.14	□□□□□ -0.31
MARF1-205	ENST00000548025	BIN2	Q9UBW5	565 aa	Predicted RBP	13.14	□□□□□ -0.31
MARF1-205	ENST00000548025	CNNM1	Q9NRU3	951 aa		13.14	□□□□□ -0.31
MARF1-205	ENST00000548025	FLAD1	Q8NFF5	587 aa		13.14	□□□□□ -0.31
MARF1-205	ENST00000548025	WDR7	Q9Y4E6	1490 aa		13.14	□□□□□ -0.31
MARF1-205	ENST00000548025	RFX1	P22670	979 aa		13.14	□□□□□ -0.31
MARF1-205	ENST00000548025	ZC3H6	P61129	1189 aa	Known RBP	13.14	□□□□□ -0.31
MARF1-205	ENST00000548025	PRAM1	Q96QH2	718 aa		13.14	□□□□□ -0.31
MARF1-205	ENST00000548025	ANKRD30B	Q9BXX2	1392 aa		13.13	□□□□□ -0.31
MARF1-205	ENST00000548025	BICDL1	Q6ZP65	573 aa		13.13	□□□□□ -0.31
MARF1-205	ENST00000548025	DPY19L2	Q6NUT2	758 aa		13.13	□□□□□ -0.31
MARF1-205	ENST00000548025	ANKRD50	Q9ULJ7	1429 aa		13.12	□□□□□ -0.31
MARF1-205	ENST00000548025	DDB1	Q16531	1140 aa		13.12	□□□□□ -0.31
MARF1-205	ENST00000548025	C19orf44	Q9H6X5	657 aa		13.12	□□□□□ -0.31
MARF1-205	ENST00000548025	ITPRIP	Q8IWB1	547 aa		13.12	□□□□□ -0.31
MARF1-205	ENST00000548025	ZNF530	Q6P9A1	599 aa	Predicted RBP	13.12	□□□□□ -0.31
MARF1-205	ENST00000548025	KIF21B	O75037	1637 aa		13.12	□□□□□ -0.31
MARF1-205	ENST00000548025	KIF22	Q14807	665 aa		13.12	□□□□□ -0.31
MARF1-205	ENST00000548025	RPRD2	Q5VT52	1461 aa	Known RBP	13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	TRPC5	Q9UL62	973 aa	Predicted RBP	13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	ASXL2	Q76L83	1435 aa		13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	ATF7IP	Q6VMQ6	1270 aa		13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	USP21	Q9UK80	565 aa		13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	TPM2	P07951	284 aa		13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	RRP7A	Q9Y3A4	280 aa	Known RBP	13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	HFM1	A2PYH4	1435 aa		13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	IQGAP2	Q13576	1575 aa		13.11	□□□□□ -0.31
MARF1-205	ENST00000548025	TPM4	P67936	248 aa		13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	TRIM6-TRIM34	B2RNG4	842 aa		13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	TRIM29	Q14134	588 aa		13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	RUFY2	Q8WXA3	655 aa		13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	AMOT	Q4VCS5	1084 aa		13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	PPP4R2	Q9NY27	417 aa		13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	IFIT2	P09913	472 aa	Known RBP	13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	PAF1	Q8N7H5	531 aa		13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	ZNF287	Q9HBT7	754 aa		13.1	□□□□□ -0.31
MARF1-205	ENST00000548025	ATAD2	Q6PL18	1390 aa		13.09	□□□□□ -0.31
MARF1-205	ENST00000548025	NCKAP5L	Q9HCH0	1330 aa		13.09	□□□□□ -0.31
MARF1-205	ENST00000548025	XPC	Q01831	940 aa	Predicted RBP	13.09	□□□□□ -0.31
MARF1-205	ENST00000548025	CCDC87	Q9NVE4	849 aa		13.09	□□□□□ -0.31
MARF1-205	ENST00000548025	KIF14	Q15058	1648 aa		13.09	□□□□□ -0.31
MARF1-205	ENST00000548025	APBB1	O00213	710 aa		13.09	□□□□□ -0.31
MARF1-205	ENST00000548025	RWDD1	Q9H446	243 aa	Predicted RBP	13.08	□□□□□ -0.32
MARF1-205	ENST00000548025	RBM27	Q9P2N5	1060 aa	Known RBP	13.08	□□□□□ -0.32
MARF1-205	ENST00000548025	GNAI1	P63096	354 aa		13.08	□□□□□ -0.32
MARF1-205	ENST00000548025	HOOK2	Q96ED9	719 aa		13.08	□□□□□ -0.32
MARF1-205	ENST00000548025	ERICH3	Q5RHP9	1530 aa		13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	CASKIN1	Q8WXD9	1431 aa		13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	TCIRG1	Q13488	830 aa		13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	WASHC4	Q2M389	1173 aa		13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	UHRF1BP1L	A0JNW5	1464 aa		13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	AIMP1	Q12904	312 aa	Known RBP	13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	CUL7	Q14999	1698 aa		13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	EIF6	P56537	245 aa	Known RBP	13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	CCDC30	Q5VVM6	783 aa		13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	BRMS1	Q9HCU9	246 aa		13.07	□□□□□ -0.32
MARF1-205	ENST00000548025	PLIN1	O60240	522 aa		13.06	□□□□□ -0.32
MARF1-205	ENST00000548025	SART3	Q15020	963 aa	Known RBP	13.06	□□□□□ -0.32
MARF1-205	ENST00000548025	SLC4A3	P48751	1232 aa		13.06	□□□□□ -0.32
MARF1-205	ENST00000548025	C9orf84	Q5VXU9	1444 aa		13.06	□□□□□ -0.32
MARF1-205	ENST00000548025		B4DLN1	442 aa		13.06	□□□□□ -0.32
MARF1-205	ENST00000548025	MRPL12	P52815	198 aa	Known RBP	13.06	□□□□□ -0.32
MARF1-205	ENST00000548025	PDE6B	P35913	854 aa		13.06	□□□□□ -0.32
MARF1-205	ENST00000548025	OGFOD1	Q8N543	542 aa		13.06	□□□□□ -0.32
MARF1-205	ENST00000548025	API5	Q9BZZ5	524 aa	Known RBP	13.06	□□□□□ -0.32
MARF1-205	ENST00000548025	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	13.05	□□□□□ -0.32	3e-8	■■■■■ 27.4
MARF1-205	ENST00000548025	ANKIB1	Q9P2G1	1089 aa		13.05	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms