RNA–Protein interactions for RNA: ENST00000547862.6

SSH1-207, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-207ENST00000547862 ANKRD30BQ9BXX2 1392 aa30.32■■■□□ 2.44
SSH1-207ENST00000547862 PIK3C2GO75747 1445 aa30.3■■■□□ 2.44
SSH1-207ENST00000547862 SOS2Q07890 1332 aaPredicted RBP30.3■■■□□ 2.44
SSH1-207ENST00000547862 COL22A1Q8NFW1 1626 aaPredicted RBP30.29■■■□□ 2.44
SSH1-207ENST00000547862 NUTM2FA1L443 756 aa30.29■■■□□ 2.44
SSH1-207ENST00000547862 CDK12Q9NYV4 1490 aaPredicted RBP30.29■■■□□ 2.44
SSH1-207ENST00000547862 FMN2Q9NZ56 1722 aa30.28■■■□□ 2.44
SSH1-207ENST00000547862 ESCO1Q5FWF5 840 aa30.28■■■□□ 2.44
SSH1-207ENST00000547862 TMEM132EQ6IEE7 984 aa30.28■■■□□ 2.44
SSH1-207ENST00000547862 WAPLQ7Z5K2 1190 aa30.28■■■□□ 2.44
SSH1-207ENST00000547862 RGS12O14924 1447 aa30.28■■■□□ 2.44
SSH1-207ENST00000547862 TECPR2O15040 1411 aa30.28■■■□□ 2.44
SSH1-207ENST00000547862 LRPPRCP42704 1394 aaKnown RBP30.28■■■□□ 2.44
SSH1-207ENST00000547862 PLEKHH1Q9ULM0 1364 aa30.27■■■□□ 2.44
SSH1-207ENST00000547862 NGLY1Q96IV0 654 aa30.26■■■□□ 2.43
SSH1-207ENST00000547862 XPCQ01831 940 aaPredicted RBP30.25■■■□□ 2.43
SSH1-207ENST00000547862 UPF1Q92900 1129 aaKnown RBP eCLIP30.25■■■□□ 2.43
SSH1-207ENST00000547862 MARF1Q9Y4F3 1742 aaKnown RBP30.25■■■□□ 2.43
SSH1-207ENST00000547862 PXDNQ92626 1479 aa30.24■■■□□ 2.43
SSH1-207ENST00000547862 QTRT2Q9H974 415 aaKnown RBP30.23■■■□□ 2.43
SSH1-207ENST00000547862 NPHP3Q7Z494 1330 aa30.22■■■□□ 2.43
SSH1-207ENST00000547862 YTHDC2Q9H6S0 1430 aaKnown RBP30.22■■■□□ 2.43
SSH1-207ENST00000547862 RGPD8O14715 1765 aaPredicted RBP30.22■■■□□ 2.43
SSH1-207ENST00000547862 KIF1AQ12756 1690 aa30.2■■■□□ 2.43
SSH1-207ENST00000547862 ABCC11Q96J66 1382 aa30.19■■■□□ 2.42
SSH1-207ENST00000547862 RBM6P78332 1123 aaKnown RBP30.19■■■□□ 2.42
SSH1-207ENST00000547862 FOXO3O43524 673 aa30.18■■■□□ 2.42
SSH1-207ENST00000547862 MYOM2P54296 1465 aa30.18■■■□□ 2.42
SSH1-207ENST00000547862 RAB3GAP2Q9H2M9 1393 aa30.17■■■□□ 2.42
SSH1-207ENST00000547862 USP21Q9UK80 565 aa30.16■■■□□ 2.42
SSH1-207ENST00000547862 NRXN1Q9ULB1 1477 aa30.13■■■□□ 2.41
SSH1-207ENST00000547862 CFAP70Q5T0N1 1121 aa30.11■■■□□ 2.41
SSH1-207ENST00000547862 SAFB2Q14151 953 aaKnown RBP eCLIP30.1■■■□□ 2.41
SSH1-207ENST00000547862 DHX57Q6P158 1386 aaKnown RBP30.08■■■□□ 2.41
SSH1-207ENST00000547862 ACIN1Q9UKV3 1341 aaKnown RBP30.08■■■□□ 2.41
SSH1-207ENST00000547862 ATRNO75882 1429 aa30.07■■■□□ 2.4
SSH1-207ENST00000547862 C14orf93Q9H972 538 aaKnown RBP30.07■■■□□ 2.4
SSH1-207ENST00000547862 TRPC5Q9UL62 973 aaPredicted RBP30.07■■■□□ 2.4
SSH1-207ENST00000547862 USP32Q8NFA0 1604 aa30.04■■■□□ 2.4
SSH1-207ENST00000547862 PLEKHG5O94827 1062 aa30.04■■■□□ 2.4
SSH1-207ENST00000547862 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.03■■■□□ 2.4
SSH1-207ENST00000547862 FNBP4Q8N3X1 1017 aaPredicted RBP30.03■■■□□ 2.4
SSH1-207ENST00000547862 PRAM1Q96QH2 718 aa30.03■■■□□ 2.4
SSH1-207ENST00000547862 ABCA3Q99758 1704 aa30.02■■■□□ 2.4
SSH1-207ENST00000547862 DLC1Q96QB1 1528 aa30.01■■■□□ 2.39
SSH1-207ENST00000547862 ATAD2Q6PL18 1390 aa30■■■□□ 2.39
SSH1-207ENST00000547862 BCL9LQ86UU0 1499 aa29.99■■■□□ 2.39
SSH1-207ENST00000547862 SPATA31A3Q5VYP0 1347 aa29.99■■■□□ 2.39
SSH1-207ENST00000547862 KRT28Q7Z3Y7 464 aa29.99■■■□□ 2.39
SSH1-207ENST00000547862 ADGRB1O14514 1584 aa29.98■■■□□ 2.39
SSH1-207ENST00000547862 ADGRB2O60241 1585 aa29.98■■■□□ 2.39
SSH1-207ENST00000547862 TNS3Q68CZ2 1445 aa29.98■■■□□ 2.39
SSH1-207ENST00000547862 POGKQ9P215 609 aa29.98■■■□□ 2.39
SSH1-207ENST00000547862 PHF8Q9UPP1 1060 aa29.98■■■□□ 2.39
SSH1-207ENST00000547862 PLCH1Q4KWH8 1693 aa29.98■■■□□ 2.39
SSH1-207ENST00000547862 HAP1P54257 671 aaPredicted RBP29.96■■■□□ 2.39
SSH1-207ENST00000547862 SIRT1Q96EB6 747 aa29.96■■■□□ 2.39
SSH1-207ENST00000547862 KDM2AQ9Y2K7 1162 aa29.96■■■□□ 2.39
SSH1-207ENST00000547862 LMOD2Q6P5Q4 547 aa29.93■■■□□ 2.38
SSH1-207ENST00000547862 GLI3P10071 1580 aa29.92■■■□□ 2.38
SSH1-207ENST00000547862 HIRIP3Q9BW71 556 aaPredicted RBP29.92■■■□□ 2.38
SSH1-207ENST00000547862 TRAK1Q9UPV9 953 aa29.92■■■□□ 2.38
SSH1-207ENST00000547862 PMFBP1Q8TBY8 1022 aa29.9■■■□□ 2.38
SSH1-207ENST00000547862 CABLES1Q8TDN4 633 aa29.9■■■□□ 2.38
SSH1-207ENST00000547862 DCAF11Q8TEB1 546 aa29.9■■■□□ 2.38
SSH1-207ENST00000547862 ARHGEF28Q8N1W1 1705 aaKnown RBP29.9■■■□□ 2.38
SSH1-207ENST00000547862 SLIT2O94813 1529 aa29.9■■■□□ 2.38
SSH1-207ENST00000547862 ANKARQ7Z5J8 1434 aa29.89■■■□□ 2.38
SSH1-207ENST00000547862 PSME1Q06323 249 aa29.89■■■□□ 2.38
SSH1-207ENST00000547862 MINK1Q8N4C8 1332 aaPredicted RBP29.89■■■□□ 2.38
SSH1-207ENST00000547862 TRPM3Q9HCF6 1732 aaPredicted RBP29.88■■■□□ 2.37
SSH1-207ENST00000547862 BRWD3Q6RI45 1802 aa29.88■■■□□ 2.37
SSH1-207ENST00000547862 RALGAPBQ86X10 1494 aa29.87■■■□□ 2.37
SSH1-207ENST00000547862 GJD4Q96KN9 370 aaPredicted RBP29.87■■■□□ 2.37
SSH1-207ENST00000547862 NWD2Q9ULI1 1742 aa29.87■■■□□ 2.37
SSH1-207ENST00000547862 UNC5CLQ8IV45 518 aa29.85■■■□□ 2.37
SSH1-207ENST00000547862 EP400Q96L91 3159 aa29.85■■■□□ 2.37
SSH1-207ENST00000547862 SBNO1A3KN83 1393 aa29.85■■■□□ 2.37
SSH1-207ENST00000547862 TULP4Q9NRJ4 1543 aa29.85■■■□□ 2.37
SSH1-207ENST00000547862 ARHGEF10O15013 1369 aa29.83■■■□□ 2.37
SSH1-207ENST00000547862 ITSN1Q15811 1721 aa29.82■■■□□ 2.36
SSH1-207ENST00000547862 ALS2Q96Q42 1657 aa29.82■■■□□ 2.36
SSH1-207ENST00000547862 EIF3AQ14152 1382 aaKnown RBP29.79■■■□□ 2.36
SSH1-207ENST00000547862 PRR36Q9H6K5 1346 aa29.79■■■□□ 2.36
SSH1-207ENST00000547862 CCDC9Q9Y3X0 531 aaKnown RBP29.79■■■□□ 2.36
SSH1-207ENST00000547862 NRAPQ86VF7 1730 aa29.79■■■□□ 2.36
SSH1-207ENST00000547862 CRYBG1Q9Y4K1 1723 aa29.76■■■□□ 2.35
SSH1-207ENST00000547862 GPRASP1Q5JY77 1395 aa29.76■■■□□ 2.35
SSH1-207ENST00000547862 WASLO00401 505 aaPredicted RBP29.73■■■□□ 2.35
SSH1-207ENST00000547862 COL14A1Q05707 1796 aaKnown RBP29.72■■■□□ 2.35
SSH1-207ENST00000547862 ATP7BP35670 1465 aa29.71■■■□□ 2.35
SSH1-207ENST00000547862 VPS72Q15906 364 aa29.7■■■□□ 2.35
SSH1-207ENST00000547862 NGDNQ8NEJ9 315 aaKnown RBP29.7■■■□□ 2.35
SSH1-207ENST00000547862 KIAA1210Q9ULL0 1709 aa29.69■■■□□ 2.34
SSH1-207ENST00000547862 A0A0G2JS52 829 aa29.69■■■□□ 2.34
SSH1-207ENST00000547862 MYT1Q01538 1121 aa29.69■■■□□ 2.34
SSH1-207ENST00000547862 PAK3O75914 559 aaPredicted RBP29.68■■■□□ 2.34
SSH1-207ENST00000547862 SEPT12Q8IYM1 358 aa29.68■■■□□ 2.34
SSH1-207ENST00000547862 TOPAZ1Q8N9V7 1692 aa29.68■■■□□ 2.34
SSH1-207ENST00000547862 HRCP23327 699 aa29.67■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms