RNA–Protein interactions for RNA: ENST00000547591.5

RAB3IP-210, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 695 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-210ENST00000547591 RETREG3Q86VR2 466 aa10.15□□□□□ -0.78
RAB3IP-210ENST00000547591 FAM160A2Q8N612 972 aaPredicted RBP10.15□□□□□ -0.78
RAB3IP-210ENST00000547591 SPTLC1O15269 473 aa10.14□□□□□ -0.79
RAB3IP-210ENST00000547591 NDUFV2P19404 249 aa10.14□□□□□ -0.79
RAB3IP-210ENST00000547591 V9GY48 417 aaPredicted RBP10.14□□□□□ -0.79
RAB3IP-210ENST00000547591 SPDYE5A6NIY4 337 aa10.13□□□□□ -0.79
RAB3IP-210ENST00000547591 C6orf229H3BNL8 230 aa10.13□□□□□ -0.79
RAB3IP-210ENST00000547591 NEUROD2Q15784 382 aa10.13□□□□□ -0.79
RAB3IP-210ENST00000547591 PCDHGC3Q9UN70 934 aa10.13□□□□□ -0.79
RAB3IP-210ENST00000547591 MTMR2Q13614 643 aa10.12□□□□□ -0.79
RAB3IP-210ENST00000547591 MYSM1Q5VVJ2 828 aa10.12□□□□□ -0.79
RAB3IP-210ENST00000547591 RIC3Q7Z5B4 369 aa10.12□□□□□ -0.79
RAB3IP-210ENST00000547591 PRKD2Q9BZL6 878 aa10.12□□□□□ -0.79
RAB3IP-210ENST00000547591 PRDM9Q9NQV7 894 aa10.12□□□□□ -0.79
RAB3IP-210ENST00000547591 MMP16P51512 607 aa10.11□□□□□ -0.79
RAB3IP-210ENST00000547591 TUSC1Q2TAM9 212 aa10.11□□□□□ -0.79
RAB3IP-210ENST00000547591 PPEF1O14829 653 aaPredicted RBP10.1□□□□□ -0.79
RAB3IP-210ENST00000547591 DXOO77932 396 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-210ENST00000547591 PRPF38BQ5VTL8 546 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-210ENST00000547591 ZBTB3Q9H5J0 574 aa10.1□□□□□ -0.79
RAB3IP-210ENST00000547591 FCF1Q9Y324 198 aaKnown RBP10.1□□□□□ -0.79
RAB3IP-210ENST00000547591 JUNDP17535 347 aa10.09□□□□□ -0.79
RAB3IP-210ENST00000547591 CLK2P49760 499 aaKnown RBP10.09□□□□□ -0.79
RAB3IP-210ENST00000547591 SYMPKQ92797 1274 aaKnown RBP10.09□□□□□ -0.79
RAB3IP-210ENST00000547591 FAM117AQ9C073 453 aa10.09□□□□□ -0.79
RAB3IP-210ENST00000547591 SH3D19Q5HYK7 790 aa10.08□□□□□ -0.8
RAB3IP-210ENST00000547591 SLC19A1P41440 591 aa10.07□□□□□ -0.8
RAB3IP-210ENST00000547591 BRPF1P55201 1214 aaPredicted RBP10.07□□□□□ -0.8
RAB3IP-210ENST00000547591 LIMD1Q9UGP4 676 aa10.06□□□□□ -0.8
RAB3IP-210ENST00000547591 RPIAP49247 311 aa10.05□□□□□ -0.8
RAB3IP-210ENST00000547591 DESI1Q6ICB0 168 aa10.05□□□□□ -0.8
RAB3IP-210ENST00000547591 PRR7Q8TB68 274 aa10.05□□□□□ -0.8
RAB3IP-210ENST00000547591 PCDHB15Q9Y5E8 787 aa10.05□□□□□ -0.8
RAB3IP-210ENST00000547591 PLEKHG3A1L390 1219 aa10.04□□□□□ -0.8
RAB3IP-210ENST00000547591 HRCP23327 699 aa10.04□□□□□ -0.8
RAB3IP-210ENST00000547591 SKIV2LQ15477 1246 aaKnown RBP10.04□□□□□ -0.8
RAB3IP-210ENST00000547591 CSPP1Q1MSJ5 1256 aa10.04□□□□□ -0.8
RAB3IP-210ENST00000547591 ZBTB24O43167 697 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-210ENST00000547591 PLA2G2CQ5R387 149 aa10.03□□□□□ -0.8
RAB3IP-210ENST00000547591 IRX2Q9BZI1 471 aaPredicted RBP10.03□□□□□ -0.8
RAB3IP-210ENST00000547591 NUTM2BA6NNL0 878 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-210ENST00000547591 NUTM2EB1AL46 878 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-210ENST00000547591 PTPRNQ16849 979 aa10.02□□□□□ -0.81
RAB3IP-210ENST00000547591 NUTM2DQ5VT03 806 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-210ENST00000547591 SPRYD7Q5W111 196 aa10.02□□□□□ -0.81
RAB3IP-210ENST00000547591 LIAT1Q6ZQX7 453 aa10.02□□□□□ -0.81
RAB3IP-210ENST00000547591 NUTM2AQ8IVF1 878 aaPredicted RBP10.02□□□□□ -0.81
RAB3IP-210ENST00000547591 POLR3EQ9NVU0 708 aa10.02□□□□□ -0.81
RAB3IP-210ENST00000547591 LILRB3O75022 631 aa10.01□□□□□ -0.81
RAB3IP-210ENST00000547591 PRKCSHP14314 528 aaPredicted RBP10.01□□□□□ -0.81
RAB3IP-210ENST00000547591 CABLES1Q8TDN4 633 aa10.01□□□□□ -0.81
RAB3IP-210ENST00000547591 NUDT12Q9BQG2 462 aa10.01□□□□□ -0.81
RAB3IP-210ENST00000547591 CCNYL3P0C7X3 344 aa10□□□□□ -0.81
RAB3IP-210ENST00000547591 ZNF598Q86UK7 904 aaKnown RBP10□□□□□ -0.81
RAB3IP-210ENST00000547591 CCDC24Q8N4L8 307 aa10□□□□□ -0.81
RAB3IP-210ENST00000547591 EMID1Q96A84 441 aaPredicted RBP10□□□□□ -0.81
RAB3IP-210ENST00000547591 GOPCQ9HD26 462 aa10□□□□□ -0.81
RAB3IP-210ENST00000547591 CD2BP2O95400 341 aaKnown RBP9.99□□□□□ -0.81
RAB3IP-210ENST00000547591 LAPTM4AQ15012 233 aa9.99□□□□□ -0.81
RAB3IP-210ENST00000547591 QPCTQ16769 361 aa9.99□□□□□ -0.81
RAB3IP-210ENST00000547591 ZNF697Q5TEC3 545 aa9.99□□□□□ -0.81
RAB3IP-210ENST00000547591 ATP1B4Q9UN42 357 aaPredicted RBP9.99□□□□□ -0.81
RAB3IP-210ENST00000547591 CFAP99D6REC4 459 aa9.98□□□□□ -0.81
RAB3IP-210ENST00000547591 HELBQ8NG08 1087 aaPredicted RBP9.98□□□□□ -0.81
RAB3IP-210ENST00000547591 IL27Q8NEV9 243 aa9.96□□□□□ -0.82
RAB3IP-210ENST00000547591 PCMTD1Q96MG8 357 aaPredicted RBP9.96□□□□□ -0.82
RAB3IP-210ENST00000547591 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.96□□□□□ -0.82
RAB3IP-210ENST00000547591 TRIM32Q13049 653 aa9.95□□□□□ -0.82
RAB3IP-210ENST00000547591 LYPD8Q6UX82 237 aa9.95□□□□□ -0.82
RAB3IP-210ENST00000547591 TSC1Q92574 1164 aa9.95□□□□□ -0.82
RAB3IP-210ENST00000547591 NRG2O14511 850 aaPredicted RBP9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 PRR20EP86478 221 aa9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 PRR20CP86479 221 aa9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 PRR20DP86480 221 aa9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 PRR20BP86481 221 aa9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 PRR20AP86496 221 aa9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 RTL5Q5HYW3 569 aaPredicted RBP9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 PPP2R2DQ66LE6 453 aa9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 PROCA1Q8NCQ7 364 aaPredicted RBP9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 EVA1BQ9NVM1 165 aa9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 PDZRN3Q9UPQ7 1066 aa9.93□□□□□ -0.82
RAB3IP-210ENST00000547591 GFRA3O60609 400 aa9.92□□□□□ -0.82
RAB3IP-210ENST00000547591 KCNH2Q12809 1159 aa9.92□□□□□ -0.82
RAB3IP-210ENST00000547591 WNT7BP56706 349 aa9.91□□□□□ -0.82
RAB3IP-210ENST00000547591 CTHP32929 405 aa9.9□□□□□ -0.82
RAB3IP-210ENST00000547591 UNC93B1Q9H1C4 597 aa9.9□□□□□ -0.82
RAB3IP-210ENST00000547591 GDF9O60383 454 aa9.89□□□□□ -0.83
RAB3IP-210ENST00000547591 F12P00748 615 aaPredicted RBP9.88□□□□□ -0.83
RAB3IP-210ENST00000547591 PTCRAQ6ISU1 281 aaPredicted RBP9.88□□□□□ -0.83
RAB3IP-210ENST00000547591 TRIM67Q6ZTA4 783 aa9.88□□□□□ -0.83
RAB3IP-210ENST00000547591 WNT7AO00755 349 aa9.87□□□□□ -0.83
RAB3IP-210ENST00000547591 FOXC1Q12948 553 aa9.87□□□□□ -0.83
RAB3IP-210ENST00000547591 TNFRSF10AO00220 468 aa9.86□□□□□ -0.83
RAB3IP-210ENST00000547591 PER1O15534 1290 aaPredicted RBP9.86□□□□□ -0.83
RAB3IP-210ENST00000547591 PKD2L1Q9P0L9 805 aa9.86□□□□□ -0.83
RAB3IP-210ENST00000547591 MAP10Q9P2G4 905 aa9.86□□□□□ -0.83
RAB3IP-210ENST00000547591 RFC5P40937 340 aa9.85□□□□□ -0.83
RAB3IP-210ENST00000547591 ARMC2Q8NEN0 867 aa9.85□□□□□ -0.83
RAB3IP-210ENST00000547591 AP1G2O75843 785 aa9.84□□□□□ -0.83
RAB3IP-210ENST00000547591 Q6ZNB5 142 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms