RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 RIMBP3CA6NJZ7 1639 aa20.38■□□□□ 0.85
BRF1-212ENST00000547562 RIMBP3BA6NNM3 1639 aa20.38■□□□□ 0.85
BRF1-212ENST00000547562 RIMBP3Q9UFD9 1639 aa20.38■□□□□ 0.85
BRF1-212ENST00000547562 CGNL1Q0VF96 1302 aa20.38■□□□□ 0.85
BRF1-212ENST00000547562 ANKRD36BQ8N2N9 1353 aa20.37■□□□□ 0.85
BRF1-212ENST00000547562 C20orf194Q5TEA3 1177 aa20.37■□□□□ 0.85
BRF1-212ENST00000547562 TSPOAP1O95153 1857 aa20.36■□□□□ 0.85
BRF1-212ENST00000547562 NKTRP30414 1462 aaKnown RBP20.36■□□□□ 0.85
BRF1-212ENST00000547562 TCERG1O14776 1098 aaKnown RBP20.36■□□□□ 0.85
BRF1-212ENST00000547562 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
BRF1-212ENST00000547562 SPINK5Q9NQ38 1064 aaPredicted RBP20.35■□□□□ 0.85
BRF1-212ENST00000547562 ERICH6Q7L0X2 663 aa20.35■□□□□ 0.85
BRF1-212ENST00000547562 E9PSI1 815 aa20.34■□□□□ 0.85
BRF1-212ENST00000547562 TNNT2P45379 298 aaPredicted RBP20.34■□□□□ 0.85
BRF1-212ENST00000547562 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.34■□□□□ 0.85
BRF1-212ENST00000547562 REREQ9P2R6 1566 aa20.34■□□□□ 0.85
BRF1-212ENST00000547562 NSD2O96028 1365 aa20.34■□□□□ 0.85
BRF1-212ENST00000547562 CABP2Q9NPB3 220 aa20.32■□□□□ 0.84
BRF1-212ENST00000547562 PTPRMP28827 1452 aa20.32■□□□□ 0.84
BRF1-212ENST00000547562 NINLQ9Y2I6 1382 aa20.31■□□□□ 0.84
BRF1-212ENST00000547562 SAFB2Q14151 953 aaKnown RBP eCLIP20.31■□□□□ 0.84
BRF1-212ENST00000547562 FBXO31Q5XUX0 539 aaPredicted RBP20.31■□□□□ 0.84
BRF1-212ENST00000547562 STK26Q9P289 416 aa20.31■□□□□ 0.84
BRF1-212ENST00000547562 AGLP35573 1532 aa20.3■□□□□ 0.84
BRF1-212ENST00000547562 MS4A1P11836 297 aa20.29■□□□□ 0.84
BRF1-212ENST00000547562 MTHFSP49914 203 aa20.29■□□□□ 0.84
BRF1-212ENST00000547562 DMRT2Q9Y5R5 561 aa20.29■□□□□ 0.84
BRF1-212ENST00000547562 CLTCQ00610 1675 aaKnown RBP20.29■□□□□ 0.84
BRF1-212ENST00000547562 YTHDC2Q9H6S0 1430 aaKnown RBP20.28■□□□□ 0.84
BRF1-212ENST00000547562 WWC1Q8IX03 1113 aa20.28■□□□□ 0.84
BRF1-212ENST00000547562 IQSEC2Q5JU85 1478 aa20.28■□□□□ 0.84
BRF1-212ENST00000547562 ANP32AP39687 249 aaKnown RBP20.28■□□□□ 0.84
BRF1-212ENST00000547562 RUNDC1Q96C34 613 aa20.28■□□□□ 0.84
BRF1-212ENST00000547562 CFAP53Q96M91 514 aa20.27■□□□□ 0.84
BRF1-212ENST00000547562 ALKQ9UM73 1620 aa20.27■□□□□ 0.84
BRF1-212ENST00000547562 SENP3Q9H4L4 574 aaPredicted RBP20.27■□□□□ 0.84
BRF1-212ENST00000547562 PPP6R1Q9UPN7 881 aa20.27■□□□□ 0.84
BRF1-212ENST00000547562 A0A1W2PP64 1363 aa20.27■□□□□ 0.83
BRF1-212ENST00000547562 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
BRF1-212ENST00000547562 KDM2BQ8NHM5 1336 aa20.26■□□□□ 0.83
BRF1-212ENST00000547562 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
BRF1-212ENST00000547562 PRAM1Q96QH2 718 aa20.25■□□□□ 0.83
BRF1-212ENST00000547562 ATAD2Q6PL18 1390 aa20.25■□□□□ 0.83
BRF1-212ENST00000547562 PDE4AP27815 886 aa20.24■□□□□ 0.83
BRF1-212ENST00000547562 NOP58Q9Y2X3 529 aaKnown RBP20.24■□□□□ 0.83
BRF1-212ENST00000547562 BCAR3O75815 825 aa20.23■□□□□ 0.83
BRF1-212ENST00000547562 ANKRD26Q9UPS8 1709 aa20.23■□□□□ 0.83
BRF1-212ENST00000547562 TCP11L2Q8N4U5 519 aa20.23■□□□□ 0.83
BRF1-212ENST00000547562 IPO9Q96P70 1041 aaKnown RBP20.23■□□□□ 0.83
BRF1-212ENST00000547562 POGKQ9P215 609 aa20.23■□□□□ 0.83
BRF1-212ENST00000547562 STAG3Q9UJ98 1225 aa20.23■□□□□ 0.83
BRF1-212ENST00000547562 SPATA31D1Q6ZQQ2 1576 aa20.23■□□□□ 0.83
BRF1-212ENST00000547562 MINK1Q8N4C8 1332 aaPredicted RBP20.22■□□□□ 0.83
BRF1-212ENST00000547562 CENPQQ7L2Z9 268 aaPredicted RBP20.22■□□□□ 0.83
BRF1-212ENST00000547562 PHF23Q9BUL5 403 aaPredicted RBP20.22■□□□□ 0.83
BRF1-212ENST00000547562 BACH2Q9BYV9 841 aa20.22■□□□□ 0.83
BRF1-212ENST00000547562 NEUROD2Q15784 382 aa20.21■□□□□ 0.83
BRF1-212ENST00000547562 CD163L1Q9NR16 1453 aa20.2■□□□□ 0.82
BRF1-212ENST00000547562 RRP7AQ9Y3A4 280 aaKnown RBP20.2■□□□□ 0.82
BRF1-212ENST00000547562 A2ML1A8K2U0 1454 aa20.2■□□□□ 0.82
BRF1-212ENST00000547562 TERF2IPQ9NYB0 399 aa20.19■□□□□ 0.82
BRF1-212ENST00000547562 CCDC27Q2M243 656 aa20.18■□□□□ 0.82
BRF1-212ENST00000547562 WDR63Q8IWG1 891 aa20.18■□□□□ 0.82
BRF1-212ENST00000547562 ARHGEF40Q8TER5 1519 aa20.18■□□□□ 0.82
BRF1-212ENST00000547562 MED14O60244 1454 aa20.18■□□□□ 0.82
BRF1-212ENST00000547562 SETD1AO15047 1707 aaKnown RBP20.18■□□□□ 0.82
BRF1-212ENST00000547562 ADGRB2O60241 1585 aa20.17■□□□□ 0.82
BRF1-212ENST00000547562 NCBP3Q53F19 620 aaKnown RBP20.17■□□□□ 0.82
BRF1-212ENST00000547562 SKAP1Q86WV1 359 aa20.17■□□□□ 0.82
BRF1-212ENST00000547562 DLC1Q96QB1 1528 aa20.16■□□□□ 0.82
BRF1-212ENST00000547562 PAK3O75914 559 aaPredicted RBP20.16■□□□□ 0.82
BRF1-212ENST00000547562 NLRP1Q9C000 1473 aa20.16■□□□□ 0.82
BRF1-212ENST00000547562 U2AF1L5P0DN76 240 aaPredicted RBP20.16■□□□□ 0.82
BRF1-212ENST00000547562 U2AF1Q01081 240 aaKnown RBP eCLIP20.16■□□□□ 0.82
BRF1-212ENST00000547562 GGNBP2Q9H3C7 697 aa20.16■□□□□ 0.82
BRF1-212ENST00000547562 PDE3AQ14432 1141 aa20.15■□□□□ 0.82
BRF1-212ENST00000547562 RIMS2Q9UQ26 1411 aa20.15■□□□□ 0.82
BRF1-212ENST00000547562 CDK19Q9BWU1 502 aa20.15■□□□□ 0.82
BRF1-212ENST00000547562 KIF20BQ96Q89 1820 aa20.15■□□□□ 0.82
BRF1-212ENST00000547562 COL3A1P02461 1466 aaPredicted RBP20.14■□□□□ 0.82
BRF1-212ENST00000547562 FYB1O15117 783 aa20.14■□□□□ 0.82
BRF1-212ENST00000547562 KIF13AQ9H1H9 1805 aa20.13■□□□□ 0.81
BRF1-212ENST00000547562 HDGFL2Q7Z4V5 671 aaPredicted RBP20.13■□□□□ 0.81
BRF1-212ENST00000547562 BCL11AQ9H165 835 aa20.12■□□□□ 0.81
BRF1-212ENST00000547562 MLECQ14165 292 aa20.12■□□□□ 0.81
BRF1-212ENST00000547562 ZBTB47Q9UFB7 747 aaPredicted RBP20.12■□□□□ 0.81
BRF1-212ENST00000547562 NPM2Q86SE8 214 aaKnown RBP20.11■□□□□ 0.81
BRF1-212ENST00000547562 RARSP54136 660 aaKnown RBP20.11■□□□□ 0.81
BRF1-212ENST00000547562 CANXP27824 592 aaKnown RBP20.1■□□□□ 0.81
BRF1-212ENST00000547562 CABP1Q9NZU7 370 aa20.1■□□□□ 0.81
BRF1-212ENST00000547562 NRXN3Q9Y4C0 1643 aa20.09■□□□□ 0.81
BRF1-212ENST00000547562 MYH16Q9H6N6 1097 aa20.08■□□□□ 0.81
BRF1-212ENST00000547562 PLEKHF1Q96S99 279 aa20.08■□□□□ 0.8
BRF1-212ENST00000547562 WAPLQ7Z5K2 1190 aa20.07■□□□□ 0.8
BRF1-212ENST00000547562 ATP7BP35670 1465 aa20.07■□□□□ 0.8
BRF1-212ENST00000547562 U2SURPO15042 1029 aaKnown RBP20.07■□□□□ 0.8
BRF1-212ENST00000547562 PANK1Q8TE04 598 aa20.07■□□□□ 0.8
BRF1-212ENST00000547562 FRAT1Q92837 279 aaPredicted RBP20.06■□□□□ 0.8
BRF1-212ENST00000547562 PNPLA6Q8IY17 1366 aa20.06■□□□□ 0.8
BRF1-212ENST00000547562 COG6Q9Y2V7 657 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms