RNA–Protein interactions for RNA: ENST00000547281.5

CDK4-204, Transcript of cyclin dependent kinase 4, humanhuman

TSL 3

Gene CDK4, Length 825 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-204ENST00000547281 NUTM2FA1L443 756 aa23.76■■□□□ 1.39
CDK4-204ENST00000547281 CFAP70Q5T0N1 1121 aa23.76■■□□□ 1.39
CDK4-204ENST00000547281 NHSL1Q5SYE7 1610 aa23.75■■□□□ 1.39
CDK4-204ENST00000547281 C8orf37Q96NL8 207 aa23.74■■□□□ 1.39
CDK4-204ENST00000547281 PNPLA6Q8IY17 1366 aa23.74■■□□□ 1.39
CDK4-204ENST00000547281 HRCP23327 699 aa23.73■■□□□ 1.39
CDK4-204ENST00000547281 AFF2P51816 1311 aa23.73■■□□□ 1.39
CDK4-204ENST00000547281 SOS2Q07890 1332 aaPredicted RBP23.73■■□□□ 1.39
CDK4-204ENST00000547281 DHX57Q6P158 1386 aaKnown RBP23.73■■□□□ 1.39
CDK4-204ENST00000547281 YTHDC2Q9H6S0 1430 aaKnown RBP23.73■■□□□ 1.39
CDK4-204ENST00000547281 ADAMTS2O95450 1211 aa23.72■■□□□ 1.39
CDK4-204ENST00000547281 RXRBP28702 533 aa23.72■■□□□ 1.39
CDK4-204ENST00000547281 KDM2AQ9Y2K7 1162 aa23.72■■□□□ 1.39
CDK4-204ENST00000547281 TECPR2O15040 1411 aa23.72■■□□□ 1.39
CDK4-204ENST00000547281 IFT172Q9UG01 1749 aa23.71■■□□□ 1.39
CDK4-204ENST00000547281 PLEKHH1Q9ULM0 1364 aa23.71■■□□□ 1.39
CDK4-204ENST00000547281 FOXO3O43524 673 aa23.71■■□□□ 1.39
CDK4-204ENST00000547281 SIRT1Q96EB6 747 aa23.71■■□□□ 1.39
CDK4-204ENST00000547281 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
CDK4-204ENST00000547281 NGLY1Q96IV0 654 aa23.69■■□□□ 1.38
CDK4-204ENST00000547281 XPCQ01831 940 aaPredicted RBP23.68■■□□□ 1.38
CDK4-204ENST00000547281 SAFB2Q14151 953 aaKnown RBP eCLIP23.68■■□□□ 1.38
CDK4-204ENST00000547281 DCAF11Q8TEB1 546 aa23.68■■□□□ 1.38
CDK4-204ENST00000547281 POGKQ9P215 609 aa23.67■■□□□ 1.38
CDK4-204ENST00000547281 PRAM1Q96QH2 718 aa23.66■■□□□ 1.38
CDK4-204ENST00000547281 QTRT2Q9H974 415 aaKnown RBP23.66■■□□□ 1.38
CDK4-204ENST00000547281 MYOM2P54296 1465 aa23.66■■□□□ 1.38
CDK4-204ENST00000547281 CDC42BPGQ6DT37 1551 aa23.65■■□□□ 1.38
CDK4-204ENST00000547281 NRXN1Q9ULB1 1477 aa23.64■■□□□ 1.38
CDK4-204ENST00000547281 STAC3Q96MF2 364 aa23.61■■□□□ 1.37
CDK4-204ENST00000547281 TRAK1Q9UPV9 953 aa23.61■■□□□ 1.37
CDK4-204ENST00000547281 LAMC1P11047 1609 aa23.61■■□□□ 1.37
CDK4-204ENST00000547281 KNDC1Q76NI1 1749 aa23.59■■□□□ 1.37
CDK4-204ENST00000547281 RBM6P78332 1123 aaKnown RBP23.58■■□□□ 1.37
CDK4-204ENST00000547281 KRT28Q7Z3Y7 464 aa23.58■■□□□ 1.37
CDK4-204ENST00000547281 USP21Q9UK80 565 aa23.58■■□□□ 1.37
CDK4-204ENST00000547281 PHF8Q9UPP1 1060 aa23.58■■□□□ 1.37
CDK4-204ENST00000547281 PXDNQ92626 1479 aa23.56■■□□□ 1.36
CDK4-204ENST00000547281 PSME1Q06323 249 aa23.55■■□□□ 1.36
CDK4-204ENST00000547281 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
CDK4-204ENST00000547281 FNBP4Q8N3X1 1017 aaPredicted RBP23.53■■□□□ 1.36
CDK4-204ENST00000547281 TRPC5Q9UL62 973 aaPredicted RBP23.53■■□□□ 1.36
CDK4-204ENST00000547281 UPF1Q92900 1129 aaKnown RBP eCLIP23.52■■□□□ 1.36
CDK4-204ENST00000547281 SPATA31A3Q5VYP0 1347 aa23.52■■□□□ 1.36
CDK4-204ENST00000547281 MINK1Q8N4C8 1332 aaPredicted RBP23.52■■□□□ 1.36
CDK4-204ENST00000547281 FMN2Q9NZ56 1722 aa23.51■■□□□ 1.35
CDK4-204ENST00000547281 LMOD2Q6P5Q4 547 aa23.51■■□□□ 1.35
CDK4-204ENST00000547281 CDK12Q9NYV4 1490 aaPredicted RBP23.5■■□□□ 1.35
CDK4-204ENST00000547281 PLEKHG5O94827 1062 aa23.5■■□□□ 1.35
CDK4-204ENST00000547281 HAP1P54257 671 aaPredicted RBP23.5■■□□□ 1.35
CDK4-204ENST00000547281 PMFBP1Q8TBY8 1022 aa23.5■■□□□ 1.35
CDK4-204ENST00000547281 DLC1Q96QB1 1528 aa23.49■■□□□ 1.35
CDK4-204ENST00000547281 ADGRB1O14514 1584 aa23.48■■□□□ 1.35
CDK4-204ENST00000547281 COL22A1Q8NFW1 1626 aaPredicted RBP23.47■■□□□ 1.35
CDK4-204ENST00000547281 KIF1AQ12756 1690 aa23.45■■□□□ 1.34
CDK4-204ENST00000547281 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
CDK4-204ENST00000547281 CABLES1Q8TDN4 633 aa23.43■■□□□ 1.34
CDK4-204ENST00000547281 RGS12O14924 1447 aa23.42■■□□□ 1.34
CDK4-204ENST00000547281 ANKARQ7Z5J8 1434 aa23.42■■□□□ 1.34
CDK4-204ENST00000547281 EIF3AQ14152 1382 aaKnown RBP23.42■■□□□ 1.34
CDK4-204ENST00000547281 RGPD8O14715 1765 aaPredicted RBP23.42■■□□□ 1.34
CDK4-204ENST00000547281 SBNO1A3KN83 1393 aa23.41■■□□□ 1.34
CDK4-204ENST00000547281 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
CDK4-204ENST00000547281 TNS3Q68CZ2 1445 aa23.41■■□□□ 1.34
CDK4-204ENST00000547281 NGDNQ8NEJ9 315 aaKnown RBP23.4■■□□□ 1.34
CDK4-204ENST00000547281 GPRASP1Q5JY77 1395 aa23.4■■□□□ 1.34
CDK4-204ENST00000547281 BCL9LQ86UU0 1499 aa23.39■■□□□ 1.34
CDK4-204ENST00000547281 UNC5CLQ8IV45 518 aa23.39■■□□□ 1.33
CDK4-204ENST00000547281 ATRNO75882 1429 aa23.39■■□□□ 1.33
CDK4-204ENST00000547281 ARHGEF10O15013 1369 aa23.39■■□□□ 1.33
CDK4-204ENST00000547281 PRR36Q9H6K5 1346 aa23.38■■□□□ 1.33
CDK4-204ENST00000547281 GJD4Q96KN9 370 aaPredicted RBP23.38■■□□□ 1.33
CDK4-204ENST00000547281 PAK3O75914 559 aaPredicted RBP23.36■■□□□ 1.33
CDK4-204ENST00000547281 NBPF1Q3BBV0 1214 aa23.36■■□□□ 1.33
CDK4-204ENST00000547281 NUDT16Q96DE0 195 aaKnown RBP23.36■■□□□ 1.33
CDK4-204ENST00000547281 ADGRB2O60241 1585 aa23.35■■□□□ 1.33
CDK4-204ENST00000547281 CDK19Q9BWU1 502 aa23.35■■□□□ 1.33
CDK4-204ENST00000547281 ATAD2Q6PL18 1390 aa23.33■■□□□ 1.33
CDK4-204ENST00000547281 USP32Q8NFA0 1604 aa23.33■■□□□ 1.32
CDK4-204ENST00000547281 TULP4Q9NRJ4 1543 aa23.33■■□□□ 1.32
CDK4-204ENST00000547281 NEUROD1Q13562 356 aa23.32■■□□□ 1.32
CDK4-204ENST00000547281 CCDC9Q9Y3X0 531 aaKnown RBP23.32■■□□□ 1.32
CDK4-204ENST00000547281 L3MBTL2Q969R5 705 aa23.31■■□□□ 1.32
CDK4-204ENST00000547281 SIN3AQ96ST3 1273 aa23.31■■□□□ 1.32
CDK4-204ENST00000547281 MARF1Q9Y4F3 1742 aaKnown RBP23.3■■□□□ 1.32
CDK4-204ENST00000547281 FAM83GA6ND36 823 aa23.3■■□□□ 1.32
CDK4-204ENST00000547281 SLIT2O94813 1529 aa23.29■■□□□ 1.32
CDK4-204ENST00000547281 CCDC61Q9Y6R9 512 aa23.27■■□□□ 1.32
CDK4-204ENST00000547281 VPS72Q15906 364 aa23.26■■□□□ 1.31
CDK4-204ENST00000547281 ARHGEF28Q8N1W1 1705 aaKnown RBP23.25■■□□□ 1.31
CDK4-204ENST00000547281 SRPK2P78362 688 aaKnown RBP23.25■■□□□ 1.31
CDK4-204ENST00000547281 CENPJQ9HC77 1338 aaPredicted RBP23.25■■□□□ 1.31
CDK4-204ENST00000547281 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
CDK4-204ENST00000547281 BTG4Q9NY30 223 aa23.24■■□□□ 1.31
CDK4-204ENST00000547281 NBPF8Q3BBV2 869 aa23.23■■□□□ 1.31
CDK4-204ENST00000547281 ACEP12821 1306 aa23.23■■□□□ 1.31
CDK4-204ENST00000547281 KIAA1210Q9ULL0 1709 aa23.22■■□□□ 1.31
CDK4-204ENST00000547281 SEPT12Q8IYM1 358 aa23.22■■□□□ 1.31
CDK4-204ENST00000547281 ATP7BP35670 1465 aa23.22■■□□□ 1.31
CDK4-204ENST00000547281 PLEKHG3A1L390 1219 aa23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms