RNA–Protein interactions for RNA: ENST00000546882.5

RFX4-207, Transcript of regulatory factor X4, humanhuman

TSL 3

Gene RFX4, Length 660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-207ENST00000546882 ATAD2Q6PL18 1390 aa13.59□□□□□ -0.23
RFX4-207ENST00000546882 PPP1R15AO75807 674 aaPredicted RBP13.59□□□□□ -0.23
RFX4-207ENST00000546882 ZRANB1Q9UGI0 708 aa13.59□□□□□ -0.23
RFX4-207ENST00000546882 PIK3R4Q99570 1358 aa13.58□□□□□ -0.23
RFX4-207ENST00000546882 HAX1O00165 279 aa13.58□□□□□ -0.24
RFX4-207ENST00000546882 LRRC59Q96AG4 307 aaKnown RBP13.58□□□□□ -0.24
RFX4-207ENST00000546882 PNPLA6Q8IY17 1366 aa13.58□□□□□ -0.24
RFX4-207ENST00000546882 DCCP43146 1447 aa13.57□□□□□ -0.24
RFX4-207ENST00000546882 MST1RQ04912 1400 aa13.57□□□□□ -0.24
RFX4-207ENST00000546882 PTPRUQ92729 1446 aa13.57□□□□□ -0.24
RFX4-207ENST00000546882 HDGFP51858 240 aaKnown RBP13.57□□□□□ -0.24
RFX4-207ENST00000546882 DAPK1P53355 1430 aa13.56□□□□□ -0.24
RFX4-207ENST00000546882 RPRD2Q5VT52 1461 aaKnown RBP13.55□□□□□ -0.24
RFX4-207ENST00000546882 DDX17Q92841 729 aaKnown RBP13.55□□□□□ -0.24
RFX4-207ENST00000546882 NGLY1Q96IV0 654 aa13.55□□□□□ -0.24
RFX4-207ENST00000546882 FBXO3Q9UK99 471 aa13.55□□□□□ -0.24
RFX4-207ENST00000546882 AMOTL2Q9Y2J4 779 aa13.55□□□□□ -0.24
RFX4-207ENST00000546882 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.54□□□□□ -0.24
RFX4-207ENST00000546882 PTPN23Q9H3S7 1636 aa13.53□□□□□ -0.24
RFX4-207ENST00000546882 MNX1P50219 401 aaPredicted RBP13.52□□□□□ -0.25
RFX4-207ENST00000546882 MIER1Q8N108 512 aa13.52□□□□□ -0.25
RFX4-207ENST00000546882 CHIC2Q9UKJ5 165 aa13.52□□□□□ -0.25
RFX4-207ENST00000546882 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
RFX4-207ENST00000546882 TRPM2O94759 1503 aa13.52□□□□□ -0.25
RFX4-207ENST00000546882 XRN1Q8IZH2 1706 aaKnown RBP13.51□□□□□ -0.25
RFX4-207ENST00000546882 VPS8Q8N3P4 1428 aa13.51□□□□□ -0.25
RFX4-207ENST00000546882 ADAMTS2O95450 1211 aa13.51□□□□□ -0.25
RFX4-207ENST00000546882 C19orf67A6NJJ6 358 aa13.5□□□□□ -0.25
RFX4-207ENST00000546882 CCDC125Q86Z20 511 aa13.5□□□□□ -0.25
RFX4-207ENST00000546882 FNBP4Q8N3X1 1017 aaPredicted RBP13.5□□□□□ -0.25
RFX4-207ENST00000546882 USP21Q9UK80 565 aa13.5□□□□□ -0.25
RFX4-207ENST00000546882 TRPC5Q9UL62 973 aaPredicted RBP13.5□□□□□ -0.25
RFX4-207ENST00000546882 UNC13BO14795 1591 aa13.49□□□□□ -0.25
RFX4-207ENST00000546882 ATRNO75882 1429 aa13.49□□□□□ -0.25
RFX4-207ENST00000546882 EVX2Q03828 476 aa13.48□□□□□ -0.25
RFX4-207ENST00000546882 LAMC1P11047 1609 aa13.48□□□□□ -0.25
RFX4-207ENST00000546882 NRXN3Q9Y4C0 1643 aa13.48□□□□□ -0.25
RFX4-207ENST00000546882 CHGAP10645 457 aaKnown RBP13.47□□□□□ -0.25
RFX4-207ENST00000546882 PLCD3Q8N3E9 789 aa13.47□□□□□ -0.25
RFX4-207ENST00000546882 ADGRL2O95490 1459 aa13.46□□□□□ -0.25
RFX4-207ENST00000546882 ADGRL3Q9HAR2 1447 aa13.46□□□□□ -0.26
RFX4-207ENST00000546882 SOS2Q07890 1332 aaPredicted RBP13.45□□□□□ -0.26
RFX4-207ENST00000546882 LRP5O75197 1615 aa13.45□□□□□ -0.26
RFX4-207ENST00000546882 PTCH1Q13635 1447 aa13.45□□□□□ -0.26
RFX4-207ENST00000546882 E9PCH4 1651 aa13.44□□□□□ -0.26
RFX4-207ENST00000546882 C1orf167Q5SNV9 1468 aa13.44□□□□□ -0.26
RFX4-207ENST00000546882 BCL9LQ86UU0 1499 aa13.44□□□□□ -0.26
RFX4-207ENST00000546882 PLEKHG5O94827 1062 aa13.44□□□□□ -0.26
RFX4-207ENST00000546882 NALCNQ8IZF0 1738 aa13.44□□□□□ -0.26
RFX4-207ENST00000546882 METP08581 1390 aa13.44□□□□□ -0.26
RFX4-207ENST00000546882 ANKRD50Q9ULJ7 1429 aa13.43□□□□□ -0.26
RFX4-207ENST00000546882 COL22A1Q8NFW1 1626 aaPredicted RBP13.42□□□□□ -0.26
RFX4-207ENST00000546882 BLMP54132 1417 aaPredicted RBP13.41□□□□□ -0.26
RFX4-207ENST00000546882 CD44P16070 742 aaKnown RBP13.41□□□□□ -0.26
RFX4-207ENST00000546882 VASPP50552 380 aaPredicted RBP13.41□□□□□ -0.26
RFX4-207ENST00000546882 DEFB132Q7Z7B7 95 aa13.41□□□□□ -0.26
RFX4-207ENST00000546882 GJD4Q96KN9 370 aaPredicted RBP13.4□□□□□ -0.26
RFX4-207ENST00000546882 ORAI2Q96SN7 254 aa13.4□□□□□ -0.26
RFX4-207ENST00000546882 MYOM2P54296 1465 aa13.4□□□□□ -0.26
RFX4-207ENST00000546882 SP7Q8TDD2 431 aaPredicted RBP13.39□□□□□ -0.27
RFX4-207ENST00000546882 MARF1Q9Y4F3 1742 aaKnown RBP13.39□□□□□ -0.27
RFX4-207ENST00000546882 GLI3P10071 1580 aa13.37□□□□□ -0.27
RFX4-207ENST00000546882 BRWD3Q6RI45 1802 aa13.37□□□□□ -0.27
RFX4-207ENST00000546882 IQGAP3Q86VI3 1631 aa13.37□□□□□ -0.27
RFX4-207ENST00000546882 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.36□□□□□ -0.27
RFX4-207ENST00000546882 RALGAPBQ86X10 1494 aa13.34□□□□□ -0.27
RFX4-207ENST00000546882 SPHKAPQ2M3C7 1700 aa13.33□□□□□ -0.27
RFX4-207ENST00000546882 HRCP23327 699 aa13.33□□□□□ -0.28
RFX4-207ENST00000546882 PXDNQ92626 1479 aa13.33□□□□□ -0.28
RFX4-207ENST00000546882 ZBTB47Q9UFB7 747 aaPredicted RBP13.32□□□□□ -0.28
RFX4-207ENST00000546882 SLIT2O94813 1529 aa13.32□□□□□ -0.28
RFX4-207ENST00000546882 ROBO2Q9HCK4 1378 aa13.32□□□□□ -0.28
RFX4-207ENST00000546882 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
RFX4-207ENST00000546882 UNC5CLQ8IV45 518 aa13.31□□□□□ -0.28
RFX4-207ENST00000546882 NEXMIFQ5QGS0 1516 aa13.3□□□□□ -0.28
RFX4-207ENST00000546882 SEPT12Q8IYM1 358 aa13.29□□□□□ -0.28
RFX4-207ENST00000546882 NPHP3Q7Z494 1330 aa13.29□□□□□ -0.28
RFX4-207ENST00000546882 PRAG1Q86YV5 1406 aa13.29□□□□□ -0.28
RFX4-207ENST00000546882 LOC105371045A0A1W2PR82 267 aa13.28□□□□□ -0.28
RFX4-207ENST00000546882 ONECUT3O60422 494 aaPredicted RBP13.28□□□□□ -0.28
RFX4-207ENST00000546882 SF3B2Q13435 895 aaKnown RBP13.28□□□□□ -0.28
RFX4-207ENST00000546882 ZNF326Q5BKZ1 582 aaKnown RBP13.28□□□□□ -0.28
RFX4-207ENST00000546882 XPCQ01831 940 aaPredicted RBP13.27□□□□□ -0.29
RFX4-207ENST00000546882 FAM50AQ14320 339 aaKnown RBP13.27□□□□□ -0.29
RFX4-207ENST00000546882 NUP155O75694 1391 aa13.27□□□□□ -0.29
RFX4-207ENST00000546882 FOXO3O43524 673 aa13.26□□□□□ -0.29
RFX4-207ENST00000546882 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
RFX4-207ENST00000546882 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
RFX4-207ENST00000546882 RASEFQ8IZ41 740 aa13.25□□□□□ -0.29
RFX4-207ENST00000546882 VPS72Q15906 364 aa13.24□□□□□ -0.29
RFX4-207ENST00000546882 KRT27Q7Z3Y8 459 aa13.24□□□□□ -0.29
RFX4-207ENST00000546882 CDC42BPGQ6DT37 1551 aa13.24□□□□□ -0.29
RFX4-207ENST00000546882 HFM1A2PYH4 1435 aa13.23□□□□□ -0.29
RFX4-207ENST00000546882 NUBP1P53384 320 aa13.23□□□□□ -0.29
RFX4-207ENST00000546882 KLHL34Q8N239 644 aa13.23□□□□□ -0.29
RFX4-207ENST00000546882 CLTCL1P53675 1640 aa13.23□□□□□ -0.29
RFX4-207ENST00000546882 USP32Q8NFA0 1604 aa13.23□□□□□ -0.29
RFX4-207ENST00000546882 ROCK1Q13464 1354 aa13.22□□□□□ -0.29
RFX4-207ENST00000546882 BAG6P46379 1132 aa13.22□□□□□ -0.29
RFX4-207ENST00000546882 IFNLR1Q8IU57 520 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms