RNA–Protein interactions for RNA: ENST00000546656.1

KRT18-203, Transcript of keratin 18, humanhuman

TSL 2

Gene KRT18, Length 521 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT18-203ENST00000546656 PLEKHH1Q9ULM0 1364 aa20.67■□□□□ 0.9
KRT18-203ENST00000546656 CDC42BPGQ6DT37 1551 aa20.67■□□□□ 0.9
KRT18-203ENST00000546656 NRXN1Q9ULB1 1477 aa20.65■□□□□ 0.9
KRT18-203ENST00000546656 YTHDC2Q9H6S0 1430 aaKnown RBP20.65■□□□□ 0.9
KRT18-203ENST00000546656 ABCC11Q96J66 1382 aa20.65■□□□□ 0.9
KRT18-203ENST00000546656 KNDC1Q76NI1 1749 aa20.64■□□□□ 0.9
KRT18-203ENST00000546656 LAMC1P11047 1609 aa20.64■□□□□ 0.9
KRT18-203ENST00000546656 MYOM2P54296 1465 aa20.64■□□□□ 0.89
KRT18-203ENST00000546656 ZNF772Q68DY9 489 aaPredicted RBP20.64■□□□□ 0.89
KRT18-203ENST00000546656 NUTM2FA1L443 756 aa20.63■□□□□ 0.89
KRT18-203ENST00000546656 ESCO1Q5FWF5 840 aa20.63■□□□□ 0.89
KRT18-203ENST00000546656 CFAP70Q5T0N1 1121 aa20.63■□□□□ 0.89
KRT18-203ENST00000546656 C14orf93Q9H972 538 aaKnown RBP20.63■□□□□ 0.89
KRT18-203ENST00000546656 SOS2Q07890 1332 aaPredicted RBP20.62■□□□□ 0.89
KRT18-203ENST00000546656 AFF2P51816 1311 aa20.6■□□□□ 0.89
KRT18-203ENST00000546656 C8orf37Q96NL8 207 aa20.59■□□□□ 0.89
KRT18-203ENST00000546656 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
KRT18-203ENST00000546656 DHX57Q6P158 1386 aaKnown RBP20.58■□□□□ 0.88
KRT18-203ENST00000546656 ADAMTS2O95450 1211 aa20.57■□□□□ 0.88
KRT18-203ENST00000546656 FOXO3O43524 673 aa20.56■□□□□ 0.88
KRT18-203ENST00000546656 PXDNQ92626 1479 aa20.56■□□□□ 0.88
KRT18-203ENST00000546656 NPHP3Q7Z494 1330 aa20.55■□□□□ 0.88
KRT18-203ENST00000546656 HRCP23327 699 aa20.55■□□□□ 0.88
KRT18-203ENST00000546656 SAFB2Q14151 953 aaKnown RBP eCLIP20.55■□□□□ 0.88
KRT18-203ENST00000546656 KDM2AQ9Y2K7 1162 aa20.55■□□□□ 0.88
KRT18-203ENST00000546656 FMN2Q9NZ56 1722 aa20.55■□□□□ 0.88
KRT18-203ENST00000546656 RXRBP28702 533 aa20.54■□□□□ 0.88
KRT18-203ENST00000546656 DCAF11Q8TEB1 546 aa20.54■□□□□ 0.88
KRT18-203ENST00000546656 SIRT1Q96EB6 747 aa20.54■□□□□ 0.88
KRT18-203ENST00000546656 PRAM1Q96QH2 718 aa20.54■□□□□ 0.88
KRT18-203ENST00000546656 ADGRB1O14514 1584 aa20.52■□□□□ 0.88
KRT18-203ENST00000546656 NGLY1Q96IV0 654 aa20.51■□□□□ 0.87
KRT18-203ENST00000546656 COL22A1Q8NFW1 1626 aaPredicted RBP20.51■□□□□ 0.87
KRT18-203ENST00000546656 DLC1Q96QB1 1528 aa20.49■□□□□ 0.87
KRT18-203ENST00000546656 QTRT2Q9H974 415 aaKnown RBP20.49■□□□□ 0.87
KRT18-203ENST00000546656 POGKQ9P215 609 aa20.49■□□□□ 0.87
KRT18-203ENST00000546656 TRAK1Q9UPV9 953 aa20.48■□□□□ 0.87
KRT18-203ENST00000546656 KIF1AQ12756 1690 aa20.48■□□□□ 0.87
KRT18-203ENST00000546656 CDK12Q9NYV4 1490 aaPredicted RBP20.45■□□□□ 0.86
KRT18-203ENST00000546656 RGPD8O14715 1765 aaPredicted RBP20.45■□□□□ 0.86
KRT18-203ENST00000546656 HIRIP3Q9BW71 556 aaPredicted RBP20.45■□□□□ 0.86
KRT18-203ENST00000546656 KRT28Q7Z3Y7 464 aa20.44■□□□□ 0.86
KRT18-203ENST00000546656 USP21Q9UK80 565 aa20.44■□□□□ 0.86
KRT18-203ENST00000546656 PHF8Q9UPP1 1060 aa20.44■□□□□ 0.86
KRT18-203ENST00000546656 RGS12O14924 1447 aa20.44■□□□□ 0.86
KRT18-203ENST00000546656 RBM6P78332 1123 aaKnown RBP20.43■□□□□ 0.86
KRT18-203ENST00000546656 SPATA31A3Q5VYP0 1347 aa20.43■□□□□ 0.86
KRT18-203ENST00000546656 ADGRB2O60241 1585 aa20.42■□□□□ 0.86
KRT18-203ENST00000546656 MINK1Q8N4C8 1332 aaPredicted RBP20.42■□□□□ 0.86
KRT18-203ENST00000546656 USP32Q8NFA0 1604 aa20.42■□□□□ 0.86
KRT18-203ENST00000546656 FNBP4Q8N3X1 1017 aaPredicted RBP20.41■□□□□ 0.86
KRT18-203ENST00000546656 UPF1Q92900 1129 aaKnown RBP eCLIP20.41■□□□□ 0.86
KRT18-203ENST00000546656 PMFBP1Q8TBY8 1022 aa20.4■□□□□ 0.86
KRT18-203ENST00000546656 STAC3Q96MF2 364 aa20.4■□□□□ 0.86
KRT18-203ENST00000546656 ANKARQ7Z5J8 1434 aa20.39■□□□□ 0.85
KRT18-203ENST00000546656 PLEKHG5O94827 1062 aa20.39■□□□□ 0.85
KRT18-203ENST00000546656 TNS3Q68CZ2 1445 aa20.38■□□□□ 0.85
KRT18-203ENST00000546656 TRPC5Q9UL62 973 aaPredicted RBP20.38■□□□□ 0.85
KRT18-203ENST00000546656 MARF1Q9Y4F3 1742 aaKnown RBP20.38■□□□□ 0.85
KRT18-203ENST00000546656 PSME1Q06323 249 aa20.37■□□□□ 0.85
KRT18-203ENST00000546656 BCL9LQ86UU0 1499 aa20.37■□□□□ 0.85
KRT18-203ENST00000546656 ATRNO75882 1429 aa20.36■□□□□ 0.85
KRT18-203ENST00000546656 PRR36Q9H6K5 1346 aa20.36■□□□□ 0.85
KRT18-203ENST00000546656 ARHGEF28Q8N1W1 1705 aaKnown RBP20.36■□□□□ 0.85
KRT18-203ENST00000546656 LMOD2Q6P5Q4 547 aa20.35■□□□□ 0.85
KRT18-203ENST00000546656 CABLES1Q8TDN4 633 aa20.35■□□□□ 0.85
KRT18-203ENST00000546656 TULP4Q9NRJ4 1543 aa20.34■□□□□ 0.85
KRT18-203ENST00000546656 WASLO00401 505 aaPredicted RBP20.34■□□□□ 0.85
KRT18-203ENST00000546656 SBNO1A3KN83 1393 aa20.34■□□□□ 0.85
KRT18-203ENST00000546656 HAP1P54257 671 aaPredicted RBP20.33■□□□□ 0.85
KRT18-203ENST00000546656 EIF3AQ14152 1382 aaKnown RBP20.33■□□□□ 0.84
KRT18-203ENST00000546656 ARHGEF10O15013 1369 aa20.3■□□□□ 0.84
KRT18-203ENST00000546656 SLIT2O94813 1529 aa20.29■□□□□ 0.84
KRT18-203ENST00000546656 NBPF1Q3BBV0 1214 aa20.29■□□□□ 0.84
KRT18-203ENST00000546656 ABCA3Q99758 1704 aa20.29■□□□□ 0.84
KRT18-203ENST00000546656 TRPM3Q9HCF6 1732 aaPredicted RBP20.28■□□□□ 0.84
KRT18-203ENST00000546656 KIAA1210Q9ULL0 1709 aa20.28■□□□□ 0.84
KRT18-203ENST00000546656 UNC5CLQ8IV45 518 aa20.28■□□□□ 0.84
KRT18-203ENST00000546656 GPRASP1Q5JY77 1395 aa20.28■□□□□ 0.84
KRT18-203ENST00000546656 ATP7BP35670 1465 aa20.27■□□□□ 0.84
KRT18-203ENST00000546656 GJD4Q96KN9 370 aaPredicted RBP20.27■□□□□ 0.84
KRT18-203ENST00000546656 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.27■□□□□ 0.83
KRT18-203ENST00000546656 NGDNQ8NEJ9 315 aaKnown RBP20.26■□□□□ 0.83
KRT18-203ENST00000546656 ATAD2Q6PL18 1390 aa20.25■□□□□ 0.83
KRT18-203ENST00000546656 NUDT16Q96DE0 195 aaKnown RBP20.25■□□□□ 0.83
KRT18-203ENST00000546656 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
KRT18-203ENST00000546656 CDK19Q9BWU1 502 aa20.25■□□□□ 0.83
KRT18-203ENST00000546656 RALGAPBQ86X10 1494 aa20.24■□□□□ 0.83
KRT18-203ENST00000546656 PLCH1Q4KWH8 1693 aa20.24■□□□□ 0.83
KRT18-203ENST00000546656 ALS2Q96Q42 1657 aa20.24■□□□□ 0.83
KRT18-203ENST00000546656 GLI3P10071 1580 aa20.24■□□□□ 0.83
KRT18-203ENST00000546656 PAK3O75914 559 aaPredicted RBP20.23■□□□□ 0.83
KRT18-203ENST00000546656 L3MBTL2Q969R5 705 aa20.23■□□□□ 0.83
KRT18-203ENST00000546656 ITSN1Q15811 1721 aa20.22■□□□□ 0.83
KRT18-203ENST00000546656 FAM83GA6ND36 823 aa20.21■□□□□ 0.83
KRT18-203ENST00000546656 NEUROD1Q13562 356 aa20.2■□□□□ 0.82
KRT18-203ENST00000546656 TOPAZ1Q8N9V7 1692 aa20.19■□□□□ 0.82
KRT18-203ENST00000546656 NWD2Q9ULI1 1742 aa20.19■□□□□ 0.82
KRT18-203ENST00000546656 VPS72Q15906 364 aa20.18■□□□□ 0.82
KRT18-203ENST00000546656 CCDC9Q9Y3X0 531 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms