RNA–Protein interactions for RNA: ENST00000546626.1

PRPF40B-205, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-205ENST00000546626 SHPRHQ149N8 1683 aa20.16■□□□□ 0.82
PRPF40B-205ENST00000546626 WAPLQ7Z5K2 1190 aa20.15■□□□□ 0.82
PRPF40B-205ENST00000546626 DHX57Q6P158 1386 aaKnown RBP20.14■□□□□ 0.81
PRPF40B-205ENST00000546626 SOS2Q07890 1332 aaPredicted RBP20.14■□□□□ 0.81
PRPF40B-205ENST00000546626 STAC3Q96MF2 364 aa20.14■□□□□ 0.81
PRPF40B-205ENST00000546626 NHSL1Q5SYE7 1610 aa20.13■□□□□ 0.81
PRPF40B-205ENST00000546626 YTHDC2Q9H6S0 1430 aaKnown RBP20.13■□□□□ 0.81
PRPF40B-205ENST00000546626 ESCO1Q5FWF5 840 aa20.13■□□□□ 0.81
PRPF40B-205ENST00000546626 MYOM2P54296 1465 aa20.12■□□□□ 0.81
PRPF40B-205ENST00000546626 PNPLA6Q8IY17 1366 aa20.12■□□□□ 0.81
PRPF40B-205ENST00000546626 CFAP70Q5T0N1 1121 aa20.12■□□□□ 0.81
PRPF40B-205ENST00000546626 NRXN1Q9ULB1 1477 aa20.11■□□□□ 0.81
PRPF40B-205ENST00000546626 IFT172Q9UG01 1749 aa20.11■□□□□ 0.81
PRPF40B-205ENST00000546626 NPHP3Q7Z494 1330 aa20.11■□□□□ 0.81
PRPF40B-205ENST00000546626 CDC42BPGQ6DT37 1551 aa20.09■□□□□ 0.81
PRPF40B-205ENST00000546626 PLEKHH1Q9ULM0 1364 aa20.08■□□□□ 0.8
PRPF40B-205ENST00000546626 RXRBP28702 533 aa20.07■□□□□ 0.8
PRPF40B-205ENST00000546626 AFF2P51816 1311 aa20.06■□□□□ 0.8
PRPF40B-205ENST00000546626 LAMC1P11047 1609 aa20.06■□□□□ 0.8
PRPF40B-205ENST00000546626 C8orf37Q96NL8 207 aa20.06■□□□□ 0.8
PRPF40B-205ENST00000546626 NUTM2FA1L443 756 aa20.05■□□□□ 0.8
PRPF40B-205ENST00000546626 FOXO3O43524 673 aa20.05■□□□□ 0.8
PRPF40B-205ENST00000546626 DCAF11Q8TEB1 546 aa20.05■□□□□ 0.8
PRPF40B-205ENST00000546626 PRAM1Q96QH2 718 aa20.04■□□□□ 0.8
PRPF40B-205ENST00000546626 POGKQ9P215 609 aa20.04■□□□□ 0.8
PRPF40B-205ENST00000546626 KDM2AQ9Y2K7 1162 aa20.04■□□□□ 0.8
PRPF40B-205ENST00000546626 KNDC1Q76NI1 1749 aa20.04■□□□□ 0.8
PRPF40B-205ENST00000546626 NGLY1Q96IV0 654 aa20.03■□□□□ 0.8
PRPF40B-205ENST00000546626 ADAMTS2O95450 1211 aa20.02■□□□□ 0.8
PRPF40B-205ENST00000546626 QTRT2Q9H974 415 aaKnown RBP20■□□□□ 0.79
PRPF40B-205ENST00000546626 SAFB2Q14151 953 aaKnown RBP eCLIP19.99■□□□□ 0.79
PRPF40B-205ENST00000546626 DLC1Q96QB1 1528 aa19.98■□□□□ 0.79
PRPF40B-205ENST00000546626 RBM6P78332 1123 aaKnown RBP19.98■□□□□ 0.79
PRPF40B-205ENST00000546626 XPCQ01831 940 aaPredicted RBP19.98■□□□□ 0.79
PRPF40B-205ENST00000546626 PHF8Q9UPP1 1060 aa19.98■□□□□ 0.79
PRPF40B-205ENST00000546626 TRAK1Q9UPV9 953 aa19.98■□□□□ 0.79
PRPF40B-205ENST00000546626 PSME1Q06323 249 aa19.97■□□□□ 0.79
PRPF40B-205ENST00000546626 PXDNQ92626 1479 aa19.97■□□□□ 0.79
PRPF40B-205ENST00000546626 CDK12Q9NYV4 1490 aaPredicted RBP19.97■□□□□ 0.79
PRPF40B-205ENST00000546626 KRT28Q7Z3Y7 464 aa19.96■□□□□ 0.79
PRPF40B-205ENST00000546626 FNBP4Q8N3X1 1017 aaPredicted RBP19.96■□□□□ 0.79
PRPF40B-205ENST00000546626 USP21Q9UK80 565 aa19.95■□□□□ 0.78
PRPF40B-205ENST00000546626 SPATA31A3Q5VYP0 1347 aa19.95■□□□□ 0.78
PRPF40B-205ENST00000546626 TRPC5Q9UL62 973 aaPredicted RBP19.94■□□□□ 0.78
PRPF40B-205ENST00000546626 ADGRB1O14514 1584 aa19.94■□□□□ 0.78
PRPF40B-205ENST00000546626 EIF3AQ14152 1382 aaKnown RBP19.93■□□□□ 0.78
PRPF40B-205ENST00000546626 FMN2Q9NZ56 1722 aa19.93■□□□□ 0.78
PRPF40B-205ENST00000546626 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
PRPF40B-205ENST00000546626 COL22A1Q8NFW1 1626 aaPredicted RBP19.91■□□□□ 0.78
PRPF40B-205ENST00000546626 KIF1AQ12756 1690 aa19.91■□□□□ 0.78
PRPF40B-205ENST00000546626 SBNO1A3KN83 1393 aa19.89■□□□□ 0.77
PRPF40B-205ENST00000546626 WASLO00401 505 aaPredicted RBP19.89■□□□□ 0.77
PRPF40B-205ENST00000546626 MINK1Q8N4C8 1332 aaPredicted RBP19.89■□□□□ 0.77
PRPF40B-205ENST00000546626 UPF1Q92900 1129 aaKnown RBP eCLIP19.89■□□□□ 0.77
PRPF40B-205ENST00000546626 HIRIP3Q9BW71 556 aaPredicted RBP19.89■□□□□ 0.77
PRPF40B-205ENST00000546626 PMFBP1Q8TBY8 1022 aa19.87■□□□□ 0.77
PRPF40B-205ENST00000546626 HAP1P54257 671 aaPredicted RBP19.86■□□□□ 0.77
PRPF40B-205ENST00000546626 ADGRB2O60241 1585 aa19.86■□□□□ 0.77
PRPF40B-205ENST00000546626 TNS3Q68CZ2 1445 aa19.85■□□□□ 0.77
PRPF40B-205ENST00000546626 ARHGEF10O15013 1369 aa19.85■□□□□ 0.77
PRPF40B-205ENST00000546626 ATRNO75882 1429 aa19.85■□□□□ 0.77
PRPF40B-205ENST00000546626 GPRASP1Q5JY77 1395 aa19.84■□□□□ 0.77
PRPF40B-205ENST00000546626 LMOD2Q6P5Q4 547 aa19.84■□□□□ 0.77
PRPF40B-205ENST00000546626 RGS12O14924 1447 aa19.84■□□□□ 0.77
PRPF40B-205ENST00000546626 UNC5CLQ8IV45 518 aa19.82■□□□□ 0.76
PRPF40B-205ENST00000546626 PRR36Q9H6K5 1346 aa19.81■□□□□ 0.76
PRPF40B-205ENST00000546626 BCL9LQ86UU0 1499 aa19.81■□□□□ 0.76
PRPF40B-205ENST00000546626 NGDNQ8NEJ9 315 aaKnown RBP19.81■□□□□ 0.76
PRPF40B-205ENST00000546626 TULP4Q9NRJ4 1543 aa19.81■□□□□ 0.76
PRPF40B-205ENST00000546626 GJD4Q96KN9 370 aaPredicted RBP19.8■□□□□ 0.76
PRPF40B-205ENST00000546626 NUDT16Q96DE0 195 aaKnown RBP19.79■□□□□ 0.76
PRPF40B-205ENST00000546626 CABLES1Q8TDN4 633 aa19.78■□□□□ 0.76
PRPF40B-205ENST00000546626 NBPF1Q3BBV0 1214 aa19.77■□□□□ 0.76
PRPF40B-205ENST00000546626 CDK19Q9BWU1 502 aa19.77■□□□□ 0.76
PRPF40B-205ENST00000546626 ATAD2Q6PL18 1390 aa19.77■□□□□ 0.76
PRPF40B-205ENST00000546626 SLIT2O94813 1529 aa19.76■□□□□ 0.75
PRPF40B-205ENST00000546626 USP32Q8NFA0 1604 aa19.76■□□□□ 0.75
PRPF40B-205ENST00000546626 RGPD8O14715 1765 aaPredicted RBP19.75■□□□□ 0.75
PRPF40B-205ENST00000546626 PLEKHG5O94827 1062 aa19.75■□□□□ 0.75
PRPF40B-205ENST00000546626 L3MBTL2Q969R5 705 aa19.75■□□□□ 0.75
PRPF40B-205ENST00000546626 CCDC61Q9Y6R9 512 aa19.75■□□□□ 0.75
PRPF40B-205ENST00000546626 KIAA1210Q9ULL0 1709 aa19.74■□□□□ 0.75
PRPF40B-205ENST00000546626 PAK3O75914 559 aaPredicted RBP19.74■□□□□ 0.75
PRPF40B-205ENST00000546626 VPS72Q15906 364 aa19.73■□□□□ 0.75
PRPF40B-205ENST00000546626 CENPJQ9HC77 1338 aaPredicted RBP19.73■□□□□ 0.75
PRPF40B-205ENST00000546626 SIN3AQ96ST3 1273 aa19.72■□□□□ 0.75
PRPF40B-205ENST00000546626 MARF1Q9Y4F3 1742 aaKnown RBP19.72■□□□□ 0.75
PRPF40B-205ENST00000546626 ARHGEF28Q8N1W1 1705 aaKnown RBP19.71■□□□□ 0.75
PRPF40B-205ENST00000546626 PLEKHG3A1L390 1219 aa19.71■□□□□ 0.75
PRPF40B-205ENST00000546626 FAM83GA6ND36 823 aa19.71■□□□□ 0.75
PRPF40B-205ENST00000546626 NEUROD1Q13562 356 aa19.71■□□□□ 0.75
PRPF40B-205ENST00000546626 ATP7BP35670 1465 aa19.71■□□□□ 0.75
PRPF40B-205ENST00000546626 RALGAPBQ86X10 1494 aa19.69■□□□□ 0.74
PRPF40B-205ENST00000546626 NBPF8Q3BBV2 869 aa19.69■□□□□ 0.74
PRPF40B-205ENST00000546626 CCDC125Q86Z20 511 aa19.69■□□□□ 0.74
PRPF40B-205ENST00000546626 CCDC9Q9Y3X0 531 aaKnown RBP19.69■□□□□ 0.74
PRPF40B-205ENST00000546626 SRPK2P78362 688 aaKnown RBP19.68■□□□□ 0.74
PRPF40B-205ENST00000546626 ACEP12821 1306 aa19.68■□□□□ 0.74
PRPF40B-205ENST00000546626 POLR3AO14802 1390 aaPredicted RBP19.68■□□□□ 0.74
PRPF40B-205ENST00000546626 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms