RNA–Protein interactions for RNA: ENST00000546433.5

SSH1-203, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 5

Gene SSH1, Length 5,621 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-203ENST00000546433 ST20-MTHFSA0A0A6YYL1 179 aa12.89□□□□□ -0.35
SSH1-203ENST00000546433 PHF14O94880 888 aa12.89□□□□□ -0.35
SSH1-203ENST00000546433 ADAMTS2O95450 1211 aa12.89□□□□□ -0.35
SSH1-203ENST00000546433 ZNF692Q9BU19 519 aaPredicted RBP12.89□□□□□ -0.35
SSH1-203ENST00000546433 USP47Q96K76 1375 aa12.89□□□□□ -0.35
SSH1-203ENST00000546433 PANK3Q9H999 370 aa12.89□□□□□ -0.35
SSH1-203ENST00000546433 DAPK1P53355 1430 aa12.88□□□□□ -0.35
SSH1-203ENST00000546433 ISY1Q9ULR0 285 aaKnown RBP12.88□□□□□ -0.35
SSH1-203ENST00000546433 TSHZ2Q9NRE2 1034 aa12.88□□□□□ -0.35
SSH1-203ENST00000546433 NBPF8Q3BBV2 869 aa12.88□□□□□ -0.35
SSH1-203ENST00000546433 NBPF14Q5TI25 921 aa12.88□□□□□ -0.35
SSH1-203ENST00000546433 ITSN2Q9NZM3 1697 aa12.87□□□□□ -0.35
SSH1-203ENST00000546433 HSP90B1P14625 803 aaKnown RBP12.87□□□□□ -0.35
SSH1-203ENST00000546433 PRKRIP1Q9H875 184 aaPredicted RBP12.87□□□□□ -0.35
SSH1-203ENST00000546433 USP35Q9P2H5 1018 aa12.87□□□□□ -0.35
SSH1-203ENST00000546433 KIAA1107Q9UPP5 1409 aa12.86□□□□□ -0.35
SSH1-203ENST00000546433 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
SSH1-203ENST00000546433 DDX11L8A8MPP1 907 aa12.86□□□□□ -0.35
SSH1-203ENST00000546433 RTEL1-TNFRSF6BF6WH68 1400 aa12.86□□□□□ -0.35
SSH1-203ENST00000546433 TATP17735 454 aaPredicted RBP12.86□□□□□ -0.35
SSH1-203ENST00000546433 CLUAP1Q96AJ1 413 aa12.86□□□□□ -0.35
SSH1-203ENST00000546433 AMOTL2Q9Y2J4 779 aa12.86□□□□□ -0.35
SSH1-203ENST00000546433 ARAP1Q96P48 1450 aa12.86□□□□□ -0.35
SSH1-203ENST00000546433 RIMBP3CA6NJZ7 1639 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 RIMBP3BA6NNM3 1639 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 RIMBP3Q9UFD9 1639 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 CHMP3Q9Y3E7 222 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 TEFQ10587 303 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 ZKSCAN2Q63HK3 967 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 ZMYM3Q14202 1370 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 KCNH5Q8NCM2 988 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 KIF16BQ96L93 1317 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 FAM161AQ3B820 660 aa12.85□□□□□ -0.35
SSH1-203ENST00000546433 LRRC59Q96AG4 307 aaKnown RBP12.84□□□□□ -0.35
SSH1-203ENST00000546433 KDM5BQ9UGL1 1544 aa12.84□□□□□ -0.35
SSH1-203ENST00000546433 PCF11O94913 1555 aaKnown RBP12.84□□□□□ -0.35
SSH1-203ENST00000546433 CLSTN1O94985 981 aa12.84□□□□□ -0.35
SSH1-203ENST00000546433 RRP1P56182 461 aaKnown RBP12.84□□□□□ -0.35
SSH1-203ENST00000546433 GZF1Q9H116 711 aaPredicted RBP12.84□□□□□ -0.35
SSH1-203ENST00000546433 PRAM1Q96QH2 718 aa12.83□□□□□ -0.35
SSH1-203ENST00000546433 MAGI2Q86UL8 1455 aa12.83□□□□□ -0.36
SSH1-203ENST00000546433 FBXO31Q5XUX0 539 aaPredicted RBP12.83□□□□□ -0.36
SSH1-203ENST00000546433 TIAM1Q13009 1591 aa12.83□□□□□ -0.36
SSH1-203ENST00000546433 NPHP3Q7Z494 1330 aa12.83□□□□□ -0.36
SSH1-203ENST00000546433 DUOX2Q9NRD8 1548 aa12.81□□□□□ -0.36
SSH1-203ENST00000546433 SPG7Q9UQ90 795 aa12.81□□□□□ -0.36
SSH1-203ENST00000546433 SKOR2Q2VWA4 1001 aaPredicted RBP12.81□□□□□ -0.36
SSH1-203ENST00000546433 ATP6V1DQ9Y5K8 247 aa12.81□□□□□ -0.36
SSH1-203ENST00000546433 LRRFIP1Q32MZ4 808 aaKnown RBP12.8□□□□□ -0.36
SSH1-203ENST00000546433 C8orf37Q96NL8 207 aa12.8□□□□□ -0.36
SSH1-203ENST00000546433 NUTM2GQ5VZR2 741 aa12.8□□□□□ -0.36
SSH1-203ENST00000546433 ZNF772Q68DY9 489 aaPredicted RBP12.8□□□□□ -0.36
SSH1-203ENST00000546433 AAMPQ13685 434 aa12.79□□□□□ -0.36
SSH1-203ENST00000546433 DDX19BQ9UMR2 479 aa12.79□□□□□ -0.36
SSH1-203ENST00000546433 PHF8Q9UPP1 1060 aa12.79□□□□□ -0.36
SSH1-203ENST00000546433 PLEKHO1Q53GL0 409 aaPredicted RBP12.79□□□□□ -0.36
SSH1-203ENST00000546433 NUP153P49790 1475 aaKnown RBP12.78□□□□□ -0.36
SSH1-203ENST00000546433 C19orf44Q9H6X5 657 aa12.78□□□□□ -0.36
SSH1-203ENST00000546433 PDE4AP27815 886 aa12.78□□□□□ -0.36
SSH1-203ENST00000546433 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
SSH1-203ENST00000546433 API5Q9BZZ5 524 aaKnown RBP12.77□□□□□ -0.36
SSH1-203ENST00000546433 C11orf95C9JLR9 678 aaPredicted RBP12.77□□□□□ -0.36
SSH1-203ENST00000546433 TMEM132EQ6IEE7 984 aa12.77□□□□□ -0.36
SSH1-203ENST00000546433 ANO8Q9HCE9 1232 aaPredicted RBP12.77□□□□□ -0.37
SSH1-203ENST00000546433 ANKRD45Q5TZF3 282 aa12.77□□□□□ -0.37
SSH1-203ENST00000546433 KRT28Q7Z3Y7 464 aa12.77□□□□□ -0.37
SSH1-203ENST00000546433 RUFY2Q8WXA3 655 aa12.77□□□□□ -0.37
SSH1-203ENST00000546433 DIAPH1O60610 1272 aaKnown RBP12.76□□□□□ -0.37
SSH1-203ENST00000546433 CDK19Q9BWU1 502 aa12.76□□□□□ -0.37
SSH1-203ENST00000546433 TRAPPC8Q9Y2L5 1435 aa12.76□□□□□ -0.37
SSH1-203ENST00000546433 RASSF8Q8NHQ8 419 aa12.76□□□□□ -0.37
SSH1-203ENST00000546433 REC8O95072 547 aa12.75□□□□□ -0.37
SSH1-203ENST00000546433 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.75□□□□□ -0.37
SSH1-203ENST00000546433 RIMS2Q9UQ26 1411 aa12.75□□□□□ -0.37
SSH1-203ENST00000546433 SF3A1Q15459 793 aaKnown RBP12.75□□□□□ -0.37
SSH1-203ENST00000546433 CRBNQ96SW2 442 aa12.75□□□□□ -0.37
SSH1-203ENST00000546433 NEXNQ0ZGT2 675 aa12.75□□□□□ -0.37
SSH1-203ENST00000546433 SYCP2Q9BX26 1530 aa12.75□□□□□ -0.37
SSH1-203ENST00000546433 POLD1P28340 1107 aa12.75□□□□□ -0.37
SSH1-203ENST00000546433 NOC3LQ8WTT2 800 aaKnown RBP12.75□□□□□ -0.37
SSH1-203ENST00000546433 ATAD2Q6PL18 1390 aa12.75□□□□□ -0.37
SSH1-203ENST00000546433 TSPOAP1O95153 1857 aa12.75□□□□□ -0.37
SSH1-203ENST00000546433 EXOC6Q8TAG9 804 aa12.74□□□□□ -0.37
SSH1-203ENST00000546433 CCDC7Q96M83 1385 aa12.74□□□□□ -0.37
SSH1-203ENST00000546433 H3BQV1 296 aa12.74□□□□□ -0.37
SSH1-203ENST00000546433 IFFO2Q5TF58 517 aa12.74□□□□□ -0.37
SSH1-203ENST00000546433 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
SSH1-203ENST00000546433 RBM33Q96EV2 1170 aaKnown RBP12.74□□□□□ -0.37
SSH1-203ENST00000546433 BCL11BQ9C0K0 894 aaPredicted RBP12.74□□□□□ -0.37
SSH1-203ENST00000546433 FRAT2O75474 233 aaPredicted RBP12.73□□□□□ -0.37
SSH1-203ENST00000546433 RILPL2Q969X0 211 aa12.73□□□□□ -0.37
SSH1-203ENST00000546433 NOL8Q76FK4 1167 aaKnown RBP12.73□□□□□ -0.37
SSH1-203ENST00000546433 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
SSH1-203ENST00000546433 KCNA6P17658 529 aa12.73□□□□□ -0.37
SSH1-203ENST00000546433 RPRD2Q5VT52 1461 aaKnown RBP12.73□□□□□ -0.37
SSH1-203ENST00000546433 DISP1Q96F81 1524 aa12.73□□□□□ -0.37
SSH1-203ENST00000546433 APAF1O14727 1248 aa12.73□□□□□ -0.37
SSH1-203ENST00000546433 DIAPH3Q9NSV4 1193 aa12.73□□□□□ -0.37
SSH1-203ENST00000546433 DZIP1LQ8IYY4 767 aaKnown RBP12.73□□□□□ -0.37
SSH1-203ENST00000546433 GOLGA6L1Q8N7Z2 621 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms