RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 TBX22Q9Y458 520 aa15.44■□□□□ 0.06
LMO3-233ENST00000546279 METP08581 1390 aa15.44■□□□□ 0.06
LMO3-233ENST00000546279 COL16A1Q07092 1604 aaPredicted RBP15.43■□□□□ 0.06
LMO3-233ENST00000546279 CADPS2Q86UW7 1296 aa15.43■□□□□ 0.06
LMO3-233ENST00000546279 LRP6O75581 1613 aa15.43■□□□□ 0.06
LMO3-233ENST00000546279 PIK3R4Q99570 1358 aa15.42■□□□□ 0.06
LMO3-233ENST00000546279 C14orf37Q86TY3 774 aa15.42■□□□□ 0.06
LMO3-233ENST00000546279 C14orf93Q9H972 538 aaKnown RBP15.42■□□□□ 0.06
LMO3-233ENST00000546279 PPP1R15AO75807 674 aaPredicted RBP15.41■□□□□ 0.06
LMO3-233ENST00000546279 ATF3P18847 181 aa15.41■□□□□ 0.06
LMO3-233ENST00000546279 NBPF8Q3BBV2 869 aa15.41■□□□□ 0.06
LMO3-233ENST00000546279 C19orf44Q9H6X5 657 aa15.4■□□□□ 0.06
LMO3-233ENST00000546279 ARHGEF28Q8N1W1 1705 aaKnown RBP15.4■□□□□ 0.06
LMO3-233ENST00000546279 TONSLQ96HA7 1378 aa15.39■□□□□ 0.05
LMO3-233ENST00000546279 CFAP70Q5T0N1 1121 aa15.39■□□□□ 0.05
LMO3-233ENST00000546279 TIMELESSQ9UNS1 1208 aa15.39■□□□□ 0.05
LMO3-233ENST00000546279 KDM2AQ9Y2K7 1162 aa15.39■□□□□ 0.05
LMO3-233ENST00000546279 TECPR2O15040 1411 aa15.39■□□□□ 0.05
LMO3-233ENST00000546279 RALGAPBQ86X10 1494 aa15.38■□□□□ 0.05
LMO3-233ENST00000546279 SHPRHQ149N8 1683 aa15.38■□□□□ 0.05
LMO3-233ENST00000546279 GPRASP1Q5JY77 1395 aa15.37■□□□□ 0.05
LMO3-233ENST00000546279 AHDC1Q5TGY3 1603 aaPredicted RBP15.37■□□□□ 0.05
LMO3-233ENST00000546279 NUTM2BA6NNL0 878 aaPredicted RBP15.37■□□□□ 0.05
LMO3-233ENST00000546279 NUTM2EB1AL46 878 aaPredicted RBP15.37■□□□□ 0.05
LMO3-233ENST00000546279 NUTM2AQ8IVF1 878 aaPredicted RBP15.37■□□□□ 0.05
LMO3-233ENST00000546279 RBM6P78332 1123 aaKnown RBP15.36■□□□□ 0.05
LMO3-233ENST00000546279 AFF2P51816 1311 aa15.36■□□□□ 0.05
LMO3-233ENST00000546279 YTHDC2Q9H6S0 1430 aaKnown RBP15.35■□□□□ 0.05
LMO3-233ENST00000546279 DLC1Q96QB1 1528 aa15.35■□□□□ 0.05
LMO3-233ENST00000546279 LRPPRCP42704 1394 aaKnown RBP15.35■□□□□ 0.05
LMO3-233ENST00000546279 PTCH1Q13635 1447 aa15.34■□□□□ 0.05
LMO3-233ENST00000546279 NALCNQ8IZF0 1738 aa15.34■□□□□ 0.05
LMO3-233ENST00000546279 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.34■□□□□ 0.05
LMO3-233ENST00000546279 NBPF1Q3BBV0 1214 aa15.34■□□□□ 0.05
LMO3-233ENST00000546279 ABCC11Q96J66 1382 aa15.34■□□□□ 0.05
LMO3-233ENST00000546279 TMEM132EQ6IEE7 984 aa15.33■□□□□ 0.04
LMO3-233ENST00000546279 NGLY1Q96IV0 654 aa15.33■□□□□ 0.04
LMO3-233ENST00000546279 QTRT2Q9H974 415 aaKnown RBP15.33■□□□□ 0.04
LMO3-233ENST00000546279 FOXD4L1Q9NU39 408 aa15.33■□□□□ 0.04
LMO3-233ENST00000546279 ROBO2Q9HCK4 1378 aa15.33■□□□□ 0.04
LMO3-233ENST00000546279 LRRC59Q96AG4 307 aaKnown RBP15.32■□□□□ 0.04
LMO3-233ENST00000546279 ZRANB1Q9UGI0 708 aa15.32■□□□□ 0.04
LMO3-233ENST00000546279 SLC4A2P04920 1241 aa15.31■□□□□ 0.04
LMO3-233ENST00000546279 BRINP3Q76B58 766 aa15.31■□□□□ 0.04
LMO3-233ENST00000546279 AMOTL2Q9Y2J4 779 aa15.31■□□□□ 0.04
LMO3-233ENST00000546279 RGS12O14924 1447 aa15.29■□□□□ 0.04
LMO3-233ENST00000546279 ATAD2Q6PL18 1390 aa15.29■□□□□ 0.04
LMO3-233ENST00000546279 SRCAPQ6ZRS2 3230 aa15.29■□□□□ 0.04
LMO3-233ENST00000546279 PLEKHH1Q9ULM0 1364 aa15.28■□□□□ 0.04
LMO3-233ENST00000546279 C8orf37Q96NL8 207 aa15.28■□□□□ 0.04
LMO3-233ENST00000546279 DCCP43146 1447 aa15.27■□□□□ 0.04
LMO3-233ENST00000546279 ADGRB2O60241 1585 aa15.27■□□□□ 0.03
LMO3-233ENST00000546279 QRICH2Q9H0J4 1663 aa15.26■□□□□ 0.03
LMO3-233ENST00000546279 SIRT1Q96EB6 747 aa15.26■□□□□ 0.03
LMO3-233ENST00000546279 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
LMO3-233ENST00000546279 ADGRL3Q9HAR2 1447 aa15.24■□□□□ 0.03
LMO3-233ENST00000546279 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
LMO3-233ENST00000546279 ROCK2O75116 1388 aaKnown RBP15.24■□□□□ 0.03
LMO3-233ENST00000546279 FMN2Q9NZ56 1722 aa15.23■□□□□ 0.03
LMO3-233ENST00000546279 USP32Q8NFA0 1604 aa15.22■□□□□ 0.03
LMO3-233ENST00000546279 WAPLQ7Z5K2 1190 aa15.22■□□□□ 0.03
LMO3-233ENST00000546279 STK26Q9P289 416 aa15.22■□□□□ 0.03
LMO3-233ENST00000546279 RGPD8O14715 1765 aaPredicted RBP15.21■□□□□ 0.03
LMO3-233ENST00000546279 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
LMO3-233ENST00000546279 TRAK1Q9UPV9 953 aa15.2■□□□□ 0.02
LMO3-233ENST00000546279 PNPLA6Q8IY17 1366 aa15.2■□□□□ 0.02
LMO3-233ENST00000546279 TULP4Q9NRJ4 1543 aa15.19■□□□□ 0.02
LMO3-233ENST00000546279 USP21Q9UK80 565 aa15.19■□□□□ 0.02
LMO3-233ENST00000546279 MST1RQ04912 1400 aa15.18■□□□□ 0.02
LMO3-233ENST00000546279 ADAMTS2O95450 1211 aa15.18■□□□□ 0.02
LMO3-233ENST00000546279 PRAM1Q96QH2 718 aa15.18■□□□□ 0.02
LMO3-233ENST00000546279 TOPAZ1Q8N9V7 1692 aa15.17■□□□□ 0.02
LMO3-233ENST00000546279 SBNO2Q9Y2G9 1366 aa15.17■□□□□ 0.02
LMO3-233ENST00000546279 POTEDQ86YR6 584 aa15.17■□□□□ 0.02
LMO3-233ENST00000546279 NHSL1Q5SYE7 1610 aa15.17■□□□□ 0.02
LMO3-233ENST00000546279 CARD11Q9BXL7 1154 aa15.16■□□□□ 0.02
LMO3-233ENST00000546279 USP47Q96K76 1375 aa15.15■□□□□ 0.02
LMO3-233ENST00000546279 FNBP4Q8N3X1 1017 aaPredicted RBP15.15■□□□□ 0.02
LMO3-233ENST00000546279 TESK2Q96S53 571 aa15.14■□□□□ 0.01
LMO3-233ENST00000546279 CENPJQ9HC77 1338 aaPredicted RBP15.14■□□□□ 0.01
LMO3-233ENST00000546279 DDX17Q92841 729 aaKnown RBP15.12■□□□□ 0.01
LMO3-233ENST00000546279 ATP7BP35670 1465 aa15.11■□□□□ 0.01
LMO3-233ENST00000546279 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
LMO3-233ENST00000546279 ATRNO75882 1429 aa15.1■□□□□ 0.01
LMO3-233ENST00000546279 C1orf167Q5SNV9 1468 aa15.1■□□□□ 0.01
LMO3-233ENST00000546279 ITSN1Q15811 1721 aa15.1■□□□□ 0.01
LMO3-233ENST00000546279 SAFB2Q14151 953 aaKnown RBP eCLIP15.1■□□□□ 0.01
LMO3-233ENST00000546279 MINK1Q8N4C8 1332 aaPredicted RBP15.1■□□□□ 0.01
LMO3-233ENST00000546279 MYOM1P52179 1685 aa15.09■□□□□ 0.01
LMO3-233ENST00000546279 ST20-MTHFSA0A0A6YYL1 179 aa15.09■□□□□ 0.01
LMO3-233ENST00000546279 POGKQ9P215 609 aa15.09■□□□□ 0.01
LMO3-233ENST00000546279 SOS2Q07890 1332 aaPredicted RBP15.09■□□□□ 0.01
LMO3-233ENST00000546279 PRR36Q9H6K5 1346 aa15.09■□□□□ 0.01
LMO3-233ENST00000546279 ANKARQ7Z5J8 1434 aa15.08■□□□□ 0
LMO3-233ENST00000546279 WASLO00401 505 aaPredicted RBP15.07■□□□□ 0
LMO3-233ENST00000546279 HIRIP3Q9BW71 556 aaPredicted RBP15.07■□□□□ 0
LMO3-233ENST00000546279 HSPA5P11021 654 aaKnown RBP15.06■□□□□ 0
LMO3-233ENST00000546279 SF3B2Q13435 895 aaKnown RBP15.06■□□□□ 0
LMO3-233ENST00000546279 GJD4Q96KN9 370 aaPredicted RBP15.06■□□□□ 0
LMO3-233ENST00000546279 KIF1AQ12756 1690 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms