RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 TOPBP1Q92547 1522 aa14.87□□□□□ -0.03
NPC1L1-204ENST00000546276 MBD3O95983 291 aa14.87□□□□□ -0.03
NPC1L1-204ENST00000546276 MVPQ14764 893 aaKnown RBP14.87□□□□□ -0.03
NPC1L1-204ENST00000546276 TULP1O00294 542 aaPredicted RBP14.87□□□□□ -0.03
NPC1L1-204ENST00000546276 GRPEL1Q9HAV7 217 aa14.87□□□□□ -0.03
NPC1L1-204ENST00000546276 FKBP5Q13451 457 aaPredicted RBP14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 TMEM132EQ6IEE7 984 aa14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 ARHGAP5Q13017 1502 aa14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 MTERF4Q7Z6M4 381 aaKnown RBP14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 OSCARQ8IYS5 282 aa14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 NOB1Q9ULX3 412 aaKnown RBP14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 MAPKBP1O60336 1514 aa14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 EID1Q9Y6B2 187 aa14.86□□□□□ -0.03
NPC1L1-204ENST00000546276 RNF214Q8ND24 703 aa14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 TSR2Q969E8 191 aaKnown RBP14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 PTPN23Q9H3S7 1636 aa14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 EPRSP07814 1512 aaKnown RBP14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 NPHP1O15259 732 aa14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 GOLGA6L1Q8N7Z2 621 aa14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 ZNF592Q92610 1267 aa14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 ZNF330Q9Y3S2 320 aaPredicted RBP14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 PLEKHH2Q8IVE3 1493 aa14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 VPS37CA5D8V6 355 aaPredicted RBP14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 TAF7LQ5H9L4 462 aa14.85□□□□□ -0.03
NPC1L1-204ENST00000546276 C20orf194Q5TEA3 1177 aa14.84□□□□□ -0.03
NPC1L1-204ENST00000546276 CIZ1Q9ULV3 898 aaPredicted RBP14.84□□□□□ -0.03
NPC1L1-204ENST00000546276 SYNJ2O15056 1496 aa14.84□□□□□ -0.03
NPC1L1-204ENST00000546276 IFIT2P09913 472 aaKnown RBP14.83□□□□□ -0.03
NPC1L1-204ENST00000546276 ATF7IPQ6VMQ6 1270 aa14.83□□□□□ -0.03
NPC1L1-204ENST00000546276 BICD2Q8TD16 824 aa14.83□□□□□ -0.03
NPC1L1-204ENST00000546276 PRPF40AO75400 957 aaKnown RBP14.83□□□□□ -0.04
NPC1L1-204ENST00000546276 ZNF771Q7L3S4 317 aaPredicted RBP14.83□□□□□ -0.04
NPC1L1-204ENST00000546276 SKAP1Q86WV1 359 aa14.83□□□□□ -0.04
NPC1L1-204ENST00000546276 K7ELQ4 463 aaPredicted RBP14.83□□□□□ -0.04
NPC1L1-204ENST00000546276 RNF20Q5VTR2 975 aa14.83□□□□□ -0.04
NPC1L1-204ENST00000546276 C9orf78Q9NZ63 289 aaPredicted RBP14.83□□□□□ -0.04
NPC1L1-204ENST00000546276 NESP48681 1621 aa14.83□□□□□ -0.04
NPC1L1-204ENST00000546276 MCM2P49736 904 aa14.82□□□□□ -0.04
NPC1L1-204ENST00000546276 NECTIN2Q92692 538 aa14.82□□□□□ -0.04
NPC1L1-204ENST00000546276 SLC12A5Q9H2X9 1139 aa14.82□□□□□ -0.04
NPC1L1-204ENST00000546276 EIF2S2P20042 333 aaKnown RBP14.82□□□□□ -0.04
NPC1L1-204ENST00000546276 TSPYL4Q9UJ04 414 aa14.82□□□□□ -0.04
NPC1L1-204ENST00000546276 CDK13Q14004 1512 aaKnown RBP14.82□□□□□ -0.04
NPC1L1-204ENST00000546276 TEFQ10587 303 aa14.82□□□□□ -0.04
NPC1L1-204ENST00000546276 C1orf115Q9H7X2 142 aa14.82□□□□□ -0.04
NPC1L1-204ENST00000546276 PRKAR2BP31323 418 aa14.81□□□□□ -0.04
NPC1L1-204ENST00000546276 NEK4P51957 841 aa14.81□□□□□ -0.04
NPC1L1-204ENST00000546276 HSP90AB4PQ58FF6 505 aa14.81□□□□□ -0.04
NPC1L1-204ENST00000546276 WWC1Q8IX03 1113 aa14.81□□□□□ -0.04
NPC1L1-204ENST00000546276 RPRD2Q5VT52 1461 aaKnown RBP14.81□□□□□ -0.04
NPC1L1-204ENST00000546276 CWC22Q9HCG8 908 aaKnown RBP14.81□□□□□ -0.04
NPC1L1-204ENST00000546276 ESPNB1AK53 854 aa14.8□□□□□ -0.04
NPC1L1-204ENST00000546276 SASS6Q6UVJ0 657 aa14.8□□□□□ -0.04
NPC1L1-204ENST00000546276 TPM3P06753 285 aa14.8□□□□□ -0.04
NPC1L1-204ENST00000546276 TSPY26PQ9H489 355 aa14.8□□□□□ -0.04
NPC1L1-204ENST00000546276 AFAP1Q8N556 730 aa14.8□□□□□ -0.04
NPC1L1-204ENST00000546276 TWISTNBQ3B726 338 aaPredicted RBP14.8□□□□□ -0.04
NPC1L1-204ENST00000546276 CHD1LQ86WJ1 897 aa14.8□□□□□ -0.04
NPC1L1-204ENST00000546276 MRC2Q9UBG0 1479 aa14.79□□□□□ -0.04
NPC1L1-204ENST00000546276 ERC2O15083 957 aa14.79□□□□□ -0.04
NPC1L1-204ENST00000546276 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.79□□□□□ -0.04
NPC1L1-204ENST00000546276 ABCC5O15440 1437 aa14.79□□□□□ -0.04
NPC1L1-204ENST00000546276 DNMBPQ6XZF7 1577 aa14.79□□□□□ -0.04
NPC1L1-204ENST00000546276 LETM1O95202 739 aaPredicted RBP14.79□□□□□ -0.04
NPC1L1-204ENST00000546276 IFT57Q9NWB7 429 aa14.79□□□□□ -0.04
NPC1L1-204ENST00000546276 C1orf141Q5JVX7 400 aa14.78□□□□□ -0.04
NPC1L1-204ENST00000546276 NEXNQ0ZGT2 675 aa14.78□□□□□ -0.04
NPC1L1-204ENST00000546276 ABCA10Q8WWZ4 1543 aa14.78□□□□□ -0.04
NPC1L1-204ENST00000546276 CCDC9Q9Y3X0 531 aaKnown RBP14.77□□□□□ -0.04
NPC1L1-204ENST00000546276 NKTRP30414 1462 aaKnown RBP14.77□□□□□ -0.05
NPC1L1-204ENST00000546276 GNAI3P08754 354 aa14.77□□□□□ -0.05
NPC1L1-204ENST00000546276 G3BP1Q13283 466 aaKnown RBP eCLIP14.77□□□□□ -0.05
NPC1L1-204ENST00000546276 DNAJC5BQ9UF47 199 aa14.77□□□□□ -0.05
NPC1L1-204ENST00000546276 UBTFL1P0CB47 393 aaPredicted RBP14.76□□□□□ -0.05
NPC1L1-204ENST00000546276 CREBRFQ8IUR6 639 aa14.76□□□□□ -0.05
NPC1L1-204ENST00000546276 TOMM22Q9NS69 142 aa14.76□□□□□ -0.05
NPC1L1-204ENST00000546276 HMGN5P82970 282 aaKnown RBP14.76□□□□□ -0.05
NPC1L1-204ENST00000546276 CCAR2Q8N163 923 aaKnown RBP14.76□□□□□ -0.05
NPC1L1-204ENST00000546276 RASSF8Q8NHQ8 419 aa14.76□□□□□ -0.05
NPC1L1-204ENST00000546276 LRPPRCP42704 1394 aaKnown RBP14.75□□□□□ -0.05
NPC1L1-204ENST00000546276 LRRFIP1Q32MZ4 808 aaKnown RBP14.75□□□□□ -0.05
NPC1L1-204ENST00000546276 CPLX2Q6PUV4 134 aaKnown RBP14.75□□□□□ -0.05
NPC1L1-204ENST00000546276 CCDC73Q6ZRK6 1079 aa14.75□□□□□ -0.05
NPC1L1-204ENST00000546276 GPS2Q13227 327 aa14.75□□□□□ -0.05
NPC1L1-204ENST00000546276 DUSP27Q5VZP5 1158 aa14.75□□□□□ -0.05
NPC1L1-204ENST00000546276 HOMER1Q86YM7 354 aa14.75□□□□□ -0.05
NPC1L1-204ENST00000546276 RRP9O43818 475 aaKnown RBP14.74□□□□□ -0.05
NPC1L1-204ENST00000546276 RARSP54136 660 aaKnown RBP14.74□□□□□ -0.05
NPC1L1-204ENST00000546276 CNTROBQ8N137 903 aa14.74□□□□□ -0.05
NPC1L1-204ENST00000546276 DDX58O95786 925 aaKnown RBP14.74□□□□□ -0.05
NPC1L1-204ENST00000546276 RBM10P98175 930 aaKnown RBP14.74□□□□□ -0.05
NPC1L1-204ENST00000546276 CAMSAP2Q08AD1 1489 aa14.73□□□□□ -0.05
NPC1L1-204ENST00000546276 TPD52L1Q16890 204 aaPredicted RBP14.73□□□□□ -0.05
NPC1L1-204ENST00000546276 ZNF428Q96B54 188 aa14.73□□□□□ -0.05
NPC1L1-204ENST00000546276 CPLX1O14810 134 aa14.72□□□□□ -0.05
NPC1L1-204ENST00000546276 NOC3LQ8WTT2 800 aaKnown RBP14.72□□□□□ -0.05
NPC1L1-204ENST00000546276 TPM1P09493 284 aa14.72□□□□□ -0.05
NPC1L1-204ENST00000546276 CCDC27Q2M243 656 aa14.72□□□□□ -0.05
NPC1L1-204ENST00000546276 CUL7Q14999 1698 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms