RNA–Protein interactions for RNA: ENST00000546229.5

COPS7A-221, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 744 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-221ENST00000546229 TRIM52Q96A61 297 aa18.99■□□□□ 0.63
COPS7A-221ENST00000546229 ORAI2Q96SN7 254 aa18.99■□□□□ 0.63
COPS7A-221ENST00000546229 FMN2Q9NZ56 1722 aa18.98■□□□□ 0.63
COPS7A-221ENST00000546229 EP400Q96L91 3159 aa18.98■□□□□ 0.63
COPS7A-221ENST00000546229 CCDC144AA2RUR9 1427 aa18.98■□□□□ 0.63
COPS7A-221ENST00000546229 NRXN1Q9ULB1 1477 aa18.97■□□□□ 0.63
COPS7A-221ENST00000546229 RXRBP28702 533 aa18.97■□□□□ 0.63
COPS7A-221ENST00000546229 MARF1Q9Y4F3 1742 aaKnown RBP18.97■□□□□ 0.63
COPS7A-221ENST00000546229 LRPPRCP42704 1394 aaKnown RBP18.95■□□□□ 0.62
COPS7A-221ENST00000546229 ABCC11Q96J66 1382 aa18.93■□□□□ 0.62
COPS7A-221ENST00000546229 ANKRD30BQ9BXX2 1392 aa18.93■□□□□ 0.62
COPS7A-221ENST00000546229 PLEKHH1Q9ULM0 1364 aa18.93■□□□□ 0.62
COPS7A-221ENST00000546229 C8orf37Q96NL8 207 aa18.93■□□□□ 0.62
COPS7A-221ENST00000546229 ATRNO75882 1429 aa18.91■□□□□ 0.62
COPS7A-221ENST00000546229 SRCAPQ6ZRS2 3230 aa18.91■□□□□ 0.62
COPS7A-221ENST00000546229 KIF1AQ12756 1690 aa18.91■□□□□ 0.62
COPS7A-221ENST00000546229 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.91■□□□□ 0.62
COPS7A-221ENST00000546229 YTHDC2Q9H6S0 1430 aaKnown RBP18.9■□□□□ 0.62
COPS7A-221ENST00000546229 RBM6P78332 1123 aaKnown RBP18.89■□□□□ 0.61
COPS7A-221ENST00000546229 FNBP4Q8N3X1 1017 aaPredicted RBP18.89■□□□□ 0.61
COPS7A-221ENST00000546229 MPHOSPH9Q99550 1183 aa18.89■□□□□ 0.61
COPS7A-221ENST00000546229 BCL9LQ86UU0 1499 aa18.89■□□□□ 0.61
COPS7A-221ENST00000546229 QTRT2Q9H974 415 aaKnown RBP18.88■□□□□ 0.61
COPS7A-221ENST00000546229 ADAMTS2O95450 1211 aa18.87■□□□□ 0.61
COPS7A-221ENST00000546229 NPHP3Q7Z494 1330 aa18.87■□□□□ 0.61
COPS7A-221ENST00000546229 WAPLQ7Z5K2 1190 aa18.87■□□□□ 0.61
COPS7A-221ENST00000546229 ABCA3Q99758 1704 aa18.87■□□□□ 0.61
COPS7A-221ENST00000546229 RGPD8O14715 1765 aaPredicted RBP18.86■□□□□ 0.61
COPS7A-221ENST00000546229 USP32Q8NFA0 1604 aa18.85■□□□□ 0.61
COPS7A-221ENST00000546229 ADGRB1O14514 1584 aa18.85■□□□□ 0.61
COPS7A-221ENST00000546229 ADGRB2O60241 1585 aa18.85■□□□□ 0.61
COPS7A-221ENST00000546229 RGL3Q3MIN7 710 aa18.84■□□□□ 0.61
COPS7A-221ENST00000546229 TMEM132EQ6IEE7 984 aa18.84■□□□□ 0.61
COPS7A-221ENST00000546229 NGLY1Q96IV0 654 aa18.83■□□□□ 0.6
COPS7A-221ENST00000546229 GLI3P10071 1580 aa18.83■□□□□ 0.6
COPS7A-221ENST00000546229 SLIT2O94813 1529 aa18.83■□□□□ 0.6
COPS7A-221ENST00000546229 DLC1Q96QB1 1528 aa18.83■□□□□ 0.6
COPS7A-221ENST00000546229 ESCO1Q5FWF5 840 aa18.82■□□□□ 0.6
COPS7A-221ENST00000546229 STK26Q9P289 416 aa18.81■□□□□ 0.6
COPS7A-221ENST00000546229 USP21Q9UK80 565 aa18.81■□□□□ 0.6
COPS7A-221ENST00000546229 FOXO3O43524 673 aa18.8■□□□□ 0.6
COPS7A-221ENST00000546229 XPCQ01831 940 aaPredicted RBP18.8■□□□□ 0.6
COPS7A-221ENST00000546229 SIRT1Q96EB6 747 aa18.8■□□□□ 0.6
COPS7A-221ENST00000546229 C14orf93Q9H972 538 aaKnown RBP18.8■□□□□ 0.6
COPS7A-221ENST00000546229 TRPC5Q9UL62 973 aaPredicted RBP18.79■□□□□ 0.6
COPS7A-221ENST00000546229 SPATA31A3Q5VYP0 1347 aa18.78■□□□□ 0.6
COPS7A-221ENST00000546229 TRPM3Q9HCF6 1732 aaPredicted RBP18.78■□□□□ 0.6
COPS7A-221ENST00000546229 PLCH1Q4KWH8 1693 aa18.78■□□□□ 0.6
COPS7A-221ENST00000546229 TNS3Q68CZ2 1445 aa18.77■□□□□ 0.6
COPS7A-221ENST00000546229 NUTM2FA1L443 756 aa18.77■□□□□ 0.6
COPS7A-221ENST00000546229 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
COPS7A-221ENST00000546229 RAB3GAP2Q9H2M9 1393 aa18.77■□□□□ 0.6
COPS7A-221ENST00000546229 NWD2Q9ULI1 1742 aa18.75■□□□□ 0.59
COPS7A-221ENST00000546229 CRYBG1Q9Y4K1 1723 aa18.75■□□□□ 0.59
COPS7A-221ENST00000546229 CFAP70Q5T0N1 1121 aa18.75■□□□□ 0.59
COPS7A-221ENST00000546229 RALGAPBQ86X10 1494 aa18.75■□□□□ 0.59
COPS7A-221ENST00000546229 ALS2Q96Q42 1657 aa18.74■□□□□ 0.59
COPS7A-221ENST00000546229 BRWD3Q6RI45 1802 aa18.74■□□□□ 0.59
COPS7A-221ENST00000546229 NRAPQ86VF7 1730 aa18.74■□□□□ 0.59
COPS7A-221ENST00000546229 ANKARQ7Z5J8 1434 aa18.74■□□□□ 0.59
COPS7A-221ENST00000546229 SBNO1A3KN83 1393 aa18.71■□□□□ 0.59
COPS7A-221ENST00000546229 ACIN1Q9UKV3 1341 aaKnown RBP18.71■□□□□ 0.59
COPS7A-221ENST00000546229 DHX57Q6P158 1386 aaKnown RBP18.7■□□□□ 0.58
COPS7A-221ENST00000546229 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
COPS7A-221ENST00000546229 GJD4Q96KN9 370 aaPredicted RBP18.69■□□□□ 0.58
COPS7A-221ENST00000546229 PRAM1Q96QH2 718 aa18.69■□□□□ 0.58
COPS7A-221ENST00000546229 TULP4Q9NRJ4 1543 aa18.69■□□□□ 0.58
COPS7A-221ENST00000546229 KRT28Q7Z3Y7 464 aa18.68■□□□□ 0.58
COPS7A-221ENST00000546229 PHF8Q9UPP1 1060 aa18.68■□□□□ 0.58
COPS7A-221ENST00000546229 UNC5CLQ8IV45 518 aa18.67■□□□□ 0.58
COPS7A-221ENST00000546229 PRR36Q9H6K5 1346 aa18.66■□□□□ 0.58
COPS7A-221ENST00000546229 ARHGEF10O15013 1369 aa18.64■□□□□ 0.57
COPS7A-221ENST00000546229 TOPAZ1Q8N9V7 1692 aa18.63■□□□□ 0.57
COPS7A-221ENST00000546229 ATP7BP35670 1465 aa18.63■□□□□ 0.57
COPS7A-221ENST00000546229 SAFB2Q14151 953 aaKnown RBP eCLIP18.62■□□□□ 0.57
COPS7A-221ENST00000546229 CABLES1Q8TDN4 633 aa18.62■□□□□ 0.57
COPS7A-221ENST00000546229 COL14A1Q05707 1796 aaKnown RBP18.61■□□□□ 0.57
COPS7A-221ENST00000546229 ITSN1Q15811 1721 aa18.6■□□□□ 0.57
COPS7A-221ENST00000546229 BLMP54132 1417 aaPredicted RBP18.6■□□□□ 0.57
COPS7A-221ENST00000546229 VPS72Q15906 364 aa18.6■□□□□ 0.57
COPS7A-221ENST00000546229 ONECUT3O60422 494 aaPredicted RBP18.59■□□□□ 0.57
COPS7A-221ENST00000546229 THSD7AQ9UPZ6 1657 aa18.59■□□□□ 0.57
COPS7A-221ENST00000546229 PHRF1Q9P1Y6 1649 aaKnown RBP18.59■□□□□ 0.57
COPS7A-221ENST00000546229 KIAA1210Q9ULL0 1709 aa18.58■□□□□ 0.57
COPS7A-221ENST00000546229 PSME1Q06323 249 aa18.58■□□□□ 0.56
COPS7A-221ENST00000546229 CCDC125Q86Z20 511 aa18.57■□□□□ 0.56
COPS7A-221ENST00000546229 PMFBP1Q8TBY8 1022 aa18.57■□□□□ 0.56
COPS7A-221ENST00000546229 TRAK1Q9UPV9 953 aa18.57■□□□□ 0.56
COPS7A-221ENST00000546229 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
COPS7A-221ENST00000546229 HIRIP3Q9BW71 556 aaPredicted RBP18.56■□□□□ 0.56
COPS7A-221ENST00000546229 FAM83GA6ND36 823 aa18.55■□□□□ 0.56
COPS7A-221ENST00000546229 HRCP23327 699 aa18.55■□□□□ 0.56
COPS7A-221ENST00000546229 POGKQ9P215 609 aa18.55■□□□□ 0.56
COPS7A-221ENST00000546229 MINK1Q8N4C8 1332 aaPredicted RBP18.54■□□□□ 0.56
COPS7A-221ENST00000546229 WASLO00401 505 aaPredicted RBP18.54■□□□□ 0.56
COPS7A-221ENST00000546229 SEPT12Q8IYM1 358 aa18.54■□□□□ 0.56
COPS7A-221ENST00000546229 DCAF11Q8TEB1 546 aa18.53■□□□□ 0.56
COPS7A-221ENST00000546229 TNS1Q9HBL0 1735 aaKnown RBP18.52■□□□□ 0.56
COPS7A-221ENST00000546229 STAC3Q96MF2 364 aa18.52■□□□□ 0.56
COPS7A-221ENST00000546229 NRKQ7Z2Y5 1582 aa18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms