RNA–Protein interactions for RNA: ENST00000545848.5

LDHC-209, Transcript of lactate dehydrogenase C, humanhuman

TSL 1 (best)

Gene LDHC, Length 813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHC-209ENST00000545848 STAC3Q96MF2 364 aa10.2□□□□□ -0.78
LDHC-209ENST00000545848 SLC4A5Q9BY07 1137 aa10.2□□□□□ -0.78
LDHC-209ENST00000545848 TYW1BQ6NUM6 668 aa10.19□□□□□ -0.78
LDHC-209ENST00000545848 NCOA2Q15596 1464 aa10.18□□□□□ -0.78
LDHC-209ENST00000545848 E2F4Q16254 413 aa10.18□□□□□ -0.78
LDHC-209ENST00000545848 KANK4Q5T7N3 995 aaPredicted RBP10.18□□□□□ -0.78
LDHC-209ENST00000545848 FBXW7Q969H0 707 aa10.18□□□□□ -0.78
LDHC-209ENST00000545848 ZBED2Q9BTP6 218 aa10.18□□□□□ -0.78
LDHC-209ENST00000545848 WDR70Q9NW82 654 aa10.18□□□□□ -0.78
LDHC-209ENST00000545848 ZNF644Q9H582 1327 aaPredicted RBP10.17□□□□□ -0.78
LDHC-209ENST00000545848 LRRC9Q6ZRR7 1453 aa10.17□□□□□ -0.78
LDHC-209ENST00000545848 PDIA6Q15084 440 aa10.16□□□□□ -0.78
LDHC-209ENST00000545848 CROCC2H7BZ55 1655 aa10.15□□□□□ -0.78
LDHC-209ENST00000545848 PLXNC1O60486 1568 aa10.15□□□□□ -0.78
LDHC-209ENST00000545848 PPP1R3GB7ZBB8 358 aa10.15□□□□□ -0.78
LDHC-209ENST00000545848 AFAP1Q8N556 730 aa10.15□□□□□ -0.78
LDHC-209ENST00000545848 DDX12PQ92771 950 aa10.15□□□□□ -0.78
LDHC-209ENST00000545848 KCTD12Q96CX2 325 aaKnown RBP10.15□□□□□ -0.78
LDHC-209ENST00000545848 EPAS1Q99814 870 aa10.15□□□□□ -0.78
LDHC-209ENST00000545848 HCSTQ9UBK5 93 aa10.15□□□□□ -0.78
LDHC-209ENST00000545848 MBD5Q9P267 1494 aa10.15□□□□□ -0.78
LDHC-209ENST00000545848 BHMG1C9JSJ3 638 aaPredicted RBP10.14□□□□□ -0.79
LDHC-209ENST00000545848 CAMSAP2Q08AD1 1489 aa10.14□□□□□ -0.79
LDHC-209ENST00000545848 ZNF518AQ6AHZ1 1483 aa10.14□□□□□ -0.79
LDHC-209ENST00000545848 C3P01024 1663 aa10.14□□□□□ -0.79
LDHC-209ENST00000545848 REREQ9P2R6 1566 aa10.14□□□□□ -0.79
LDHC-209ENST00000545848 ATP7AQ04656 1500 aa10.13□□□□□ -0.79
LDHC-209ENST00000545848 PTPRMP28827 1452 aa10.13□□□□□ -0.79
LDHC-209ENST00000545848 PHLDB1Q86UU1 1377 aa10.13□□□□□ -0.79
LDHC-209ENST00000545848 COL9A1P20849 921 aa10.12□□□□□ -0.79
LDHC-209ENST00000545848 MTUS2Q5JR59 1369 aa10.12□□□□□ -0.79
LDHC-209ENST00000545848 MLH3Q9UHC1 1453 aa10.11□□□□□ -0.79
LDHC-209ENST00000545848 SPDYE16A6NNV3 312 aaPredicted RBP10.11□□□□□ -0.79
LDHC-209ENST00000545848 C6orf132Q5T0Z8 1188 aa10.11□□□□□ -0.79
LDHC-209ENST00000545848 NBPF3Q9H094 633 aa10.11□□□□□ -0.79
LDHC-209ENST00000545848 CLTCQ00610 1675 aaKnown RBP10.11□□□□□ -0.79
LDHC-209ENST00000545848 MAP3K1Q13233 1512 aa10.11□□□□□ -0.79
LDHC-209ENST00000545848 C9orf84Q5VXU9 1444 aa10.1□□□□□ -0.79
LDHC-209ENST00000545848 NBR1Q14596 966 aa10.1□□□□□ -0.79
LDHC-209ENST00000545848 PROX2Q3B8N5 592 aa10.1□□□□□ -0.79
LDHC-209ENST00000545848 MRPL50Q8N5N7 158 aaKnown RBP10.1□□□□□ -0.79
LDHC-209ENST00000545848 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
LDHC-209ENST00000545848 ARIH1Q9Y4X5 557 aaPredicted RBP10.1□□□□□ -0.79
LDHC-209ENST00000545848 ATP10AO60312 1499 aa10.1□□□□□ -0.79
LDHC-209ENST00000545848 MAGI2Q86UL8 1455 aa10.1□□□□□ -0.79
LDHC-209ENST00000545848 MROH1Q8NDA8 1641 aa10.09□□□□□ -0.79
LDHC-209ENST00000545848 HNRNPMP52272 730 aaKnown RBP eCLIP10.09□□□□□ -0.79
LDHC-209ENST00000545848 TSHZ2Q9NRE2 1034 aa10.09□□□□□ -0.79
LDHC-209ENST00000545848 PTPN23Q9H3S7 1636 aa10.08□□□□□ -0.8
LDHC-209ENST00000545848 EFCAB2Q5VUJ9 269 aa10.08□□□□□ -0.8
LDHC-209ENST00000545848 RABGEF1Q9UJ41 708 aa10.08□□□□□ -0.8
LDHC-209ENST00000545848 ZNF777Q9ULD5 760 aaPredicted RBP10.08□□□□□ -0.8
LDHC-209ENST00000545848 CCNB3Q8WWL7 1395 aa10.08□□□□□ -0.8
LDHC-209ENST00000545848 LMTK3Q96Q04 1460 aa10.08□□□□□ -0.8
LDHC-209ENST00000545848 ARHGEF5Q12774 1597 aa10.08□□□□□ -0.8
LDHC-209ENST00000545848 CEP152O94986 1710 aa10.07□□□□□ -0.8
LDHC-209ENST00000545848 GOLGA8CPA6NN73 597 aa10.06□□□□□ -0.8
LDHC-209ENST00000545848 EN1Q05925 392 aaPredicted RBP10.06□□□□□ -0.8
LDHC-209ENST00000545848 CDK11AQ9UQ88 783 aaPredicted RBP10.06□□□□□ -0.8
LDHC-209ENST00000545848 AGLP35573 1532 aa10.06□□□□□ -0.8
LDHC-209ENST00000545848 MAST1Q9Y2H9 1570 aa10.05□□□□□ -0.8
LDHC-209ENST00000545848 DNMT1P26358 1616 aaKnown RBP10.05□□□□□ -0.8
LDHC-209ENST00000545848 MAP3K7O43318 606 aa10.05□□□□□ -0.8
LDHC-209ENST00000545848 MLECQ14165 292 aa10.05□□□□□ -0.8
LDHC-209ENST00000545848 WNT2BQ93097 391 aa10.05□□□□□ -0.8
LDHC-209ENST00000545848 STRCQ7RTU9 1775 aa10.05□□□□□ -0.8
LDHC-209ENST00000545848 KIAA1107Q9UPP5 1409 aa10.05□□□□□ -0.8
LDHC-209ENST00000545848 PREX1Q8TCU6 1659 aa10.05□□□□□ -0.8
LDHC-209ENST00000545848 MROH2AA6NES4 1674 aa10.04□□□□□ -0.8
LDHC-209ENST00000545848 PTPN5P54829 565 aa10.04□□□□□ -0.8
LDHC-209ENST00000545848 MYOM3Q5VTT5 1437 aa10.04□□□□□ -0.8
LDHC-209ENST00000545848 CCDC141Q6ZP82 1450 aa10.04□□□□□ -0.8
LDHC-209ENST00000545848 GRXCR2A6NFK2 248 aa10.03□□□□□ -0.8
LDHC-209ENST00000545848 TSR1Q2NL82 804 aaKnown RBP10.03□□□□□ -0.8
LDHC-209ENST00000545848 THSD4Q6ZMP0 1018 aa10.03□□□□□ -0.8
LDHC-209ENST00000545848 PLA2G2EQ9NZK7 142 aa10.03□□□□□ -0.8
LDHC-209ENST00000545848 KIAA1468Q9P260 1216 aa10.02□□□□□ -0.81
LDHC-209ENST00000545848 CFDP1Q9UEE9 299 aaPredicted RBP10.02□□□□□ -0.81
LDHC-209ENST00000545848 RNF17Q9BXT8 1623 aaKnown RBP10.02□□□□□ -0.81
LDHC-209ENST00000545848 A2MP01023 1474 aa10.02□□□□□ -0.81
LDHC-209ENST00000545848 MYO3AQ8NEV4 1616 aa10.01□□□□□ -0.81
LDHC-209ENST00000545848 ONECUT3O60422 494 aaPredicted RBP10.01□□□□□ -0.81
LDHC-209ENST00000545848 CEBPAP49715 358 aaPredicted RBP10.01□□□□□ -0.81
LDHC-209ENST00000545848 TCOF1Q13428 1488 aaKnown RBP10.01□□□□□ -0.81
LDHC-209ENST00000545848 ARID4BQ4LE39 1312 aaPredicted RBP10.01□□□□□ -0.81
LDHC-209ENST00000545848 CFAP65Q6ZU64 1925 aaKnown RBP10□□□□□ -0.81
LDHC-209ENST00000545848 PLEKHH2Q8IVE3 1493 aa10□□□□□ -0.81
LDHC-209ENST00000545848 TRIM6-TRIM34B2RNG4 842 aa10□□□□□ -0.81
LDHC-209ENST00000545848 PPARGC1BQ86YN6 1023 aaKnown RBP10□□□□□ -0.81
LDHC-209ENST00000545848 ABCC5O15440 1437 aa9.99□□□□□ -0.81
LDHC-209ENST00000545848 PTPRKQ15262 1439 aa9.99□□□□□ -0.81
LDHC-209ENST00000545848 FGD6Q6ZV73 1430 aa9.99□□□□□ -0.81
LDHC-209ENST00000545848 PRIM1P49642 420 aaKnown RBP9.99□□□□□ -0.81
LDHC-209ENST00000545848 LAPTM4BQ86VI4 370 aa9.99□□□□□ -0.81
LDHC-209ENST00000545848 ZNF142P52746 1687 aaPredicted RBP9.99□□□□□ -0.81
LDHC-209ENST00000545848 DEPDC5O75140 1603 aa9.98□□□□□ -0.81
LDHC-209ENST00000545848 ANKK1Q8NFD2 765 aa9.98□□□□□ -0.81
LDHC-209ENST00000545848 SPAG9O60271 1321 aaKnown RBP9.98□□□□□ -0.81
LDHC-209ENST00000545848 OSBPP22059 807 aa9.97□□□□□ -0.81
LDHC-209ENST00000545848 KCNV2Q8TDN2 545 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms