RNA–Protein interactions for RNA: ENST00000545445.1

LTBR-214, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 379 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-214ENST00000545445 TRPC5Q9UL62 973 aaPredicted RBP17.23■□□□□ 0.35
LTBR-214ENST00000545445 EP400Q96L91 3159 aa17.23■□□□□ 0.35
LTBR-214ENST00000545445 ATRNO75882 1429 aa17.21■□□□□ 0.35
LTBR-214ENST00000545445 CCER1Q8TC90 406 aaPredicted RBP17.21■□□□□ 0.35
LTBR-214ENST00000545445 PTCH1Q13635 1447 aa17.21■□□□□ 0.34
LTBR-214ENST00000545445 LAMC1P11047 1609 aa17.2■□□□□ 0.34
LTBR-214ENST00000545445 SOS2Q07890 1332 aaPredicted RBP17.2■□□□□ 0.34
LTBR-214ENST00000545445 FNBP4Q8N3X1 1017 aaPredicted RBP17.19■□□□□ 0.34
LTBR-214ENST00000545445 ORAI2Q96SN7 254 aa17.19■□□□□ 0.34
LTBR-214ENST00000545445 CLTCL1P53675 1640 aa17.17■□□□□ 0.34
LTBR-214ENST00000545445 NEXMIFQ5QGS0 1516 aa17.16■□□□□ 0.34
LTBR-214ENST00000545445 MYOM2P54296 1465 aa17.16■□□□□ 0.34
LTBR-214ENST00000545445 ROBO2Q9HCK4 1378 aa17.15■□□□□ 0.34
LTBR-214ENST00000545445 COL22A1Q8NFW1 1626 aaPredicted RBP17.14■□□□□ 0.33
LTBR-214ENST00000545445 BCL9LQ86UU0 1499 aa17.14■□□□□ 0.33
LTBR-214ENST00000545445 CCDC125Q86Z20 511 aa17.12■□□□□ 0.33
LTBR-214ENST00000545445 RPGRIP1LQ68CZ1 1315 aa17.12■□□□□ 0.33
LTBR-214ENST00000545445 KIF1BO60333 1816 aa17.12■□□□□ 0.33
LTBR-214ENST00000545445 SPATA31E1Q6ZUB1 1445 aa17.12■□□□□ 0.33
LTBR-214ENST00000545445 STAC3Q96MF2 364 aa17.1■□□□□ 0.33
LTBR-214ENST00000545445 SIN3AQ96ST3 1273 aa17.1■□□□□ 0.33
LTBR-214ENST00000545445 XPCQ01831 940 aaPredicted RBP17.09■□□□□ 0.33
LTBR-214ENST00000545445 NEUROD1Q13562 356 aa17.09■□□□□ 0.33
LTBR-214ENST00000545445 GJD4Q96KN9 370 aaPredicted RBP17.09■□□□□ 0.33
LTBR-214ENST00000545445 PXDNQ92626 1479 aa17.09■□□□□ 0.33
LTBR-214ENST00000545445 BLMP54132 1417 aaPredicted RBP17.08■□□□□ 0.32
LTBR-214ENST00000545445 TIMELESSQ9UNS1 1208 aa17.08■□□□□ 0.32
LTBR-214ENST00000545445 PRAG1Q86YV5 1406 aa17.07■□□□□ 0.32
LTBR-214ENST00000545445 NPHP3Q7Z494 1330 aa17.07■□□□□ 0.32
LTBR-214ENST00000545445 RGL3Q3MIN7 710 aa17.07■□□□□ 0.32
LTBR-214ENST00000545445 RALGAPBQ86X10 1494 aa17.06■□□□□ 0.32
LTBR-214ENST00000545445 ESCO1Q5FWF5 840 aa17.06■□□□□ 0.32
LTBR-214ENST00000545445 DEFB132Q7Z7B7 95 aa17.06■□□□□ 0.32
LTBR-214ENST00000545445 GLI3P10071 1580 aa17.06■□□□□ 0.32
LTBR-214ENST00000545445 VGFO15240 615 aaPredicted RBP17.05■□□□□ 0.32
LTBR-214ENST00000545445 CDC42BPGQ6DT37 1551 aa17.05■□□□□ 0.32
LTBR-214ENST00000545445 MARF1Q9Y4F3 1742 aaKnown RBP17.04■□□□□ 0.32
LTBR-214ENST00000545445 TONSLQ96HA7 1378 aa17.03■□□□□ 0.32
LTBR-214ENST00000545445 FOXO3O43524 673 aa17.03■□□□□ 0.32
LTBR-214ENST00000545445 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.02■□□□□ 0.32
LTBR-214ENST00000545445 SLIT2O94813 1529 aa17.01■□□□□ 0.31
LTBR-214ENST00000545445 UNC5CLQ8IV45 518 aa17.01■□□□□ 0.31
LTBR-214ENST00000545445 LRP5O75197 1615 aa17■□□□□ 0.31
LTBR-214ENST00000545445 NUTM2FA1L443 756 aa17■□□□□ 0.31
LTBR-214ENST00000545445 DCAF11Q8TEB1 546 aa17■□□□□ 0.31
LTBR-214ENST00000545445 L3MBTL2Q969R5 705 aa17■□□□□ 0.31
LTBR-214ENST00000545445 SF3B2Q13435 895 aaKnown RBP16.98■□□□□ 0.31
LTBR-214ENST00000545445 SEPT12Q8IYM1 358 aa16.97■□□□□ 0.31
LTBR-214ENST00000545445 LRPPRCP42704 1394 aaKnown RBP16.97■□□□□ 0.31
LTBR-214ENST00000545445 PPLO60437 1756 aa16.97■□□□□ 0.31
LTBR-214ENST00000545445 USP32Q8NFA0 1604 aa16.96■□□□□ 0.31
LTBR-214ENST00000545445 BRWD3Q6RI45 1802 aa16.96■□□□□ 0.31
LTBR-214ENST00000545445 PSDA5PKW4 1024 aaPredicted RBP16.96■□□□□ 0.31
LTBR-214ENST00000545445 SPATA31A3Q5VYP0 1347 aa16.96■□□□□ 0.3
LTBR-214ENST00000545445 KDM2AQ9Y2K7 1162 aa16.95■□□□□ 0.3
LTBR-214ENST00000545445 IFT172Q9UG01 1749 aa16.95■□□□□ 0.3
LTBR-214ENST00000545445 NRXN1Q9ULB1 1477 aa16.94■□□□□ 0.3
LTBR-214ENST00000545445 ADGRF5Q8IZF2 1346 aa16.94■□□□□ 0.3
LTBR-214ENST00000545445 PLEKHG5O94827 1062 aa16.93■□□□□ 0.3
LTBR-214ENST00000545445 WAPLQ7Z5K2 1190 aa16.93■□□□□ 0.3
LTBR-214ENST00000545445 STK26Q9P289 416 aa16.93■□□□□ 0.3
LTBR-214ENST00000545445 PLEKHH1Q9ULM0 1364 aa16.92■□□□□ 0.3
LTBR-214ENST00000545445 VPS72Q15906 364 aa16.92■□□□□ 0.3
LTBR-214ENST00000545445 CCDC9Q9Y3X0 531 aaKnown RBP16.92■□□□□ 0.3
LTBR-214ENST00000545445 PIK3C2GO75747 1445 aa16.91■□□□□ 0.3
LTBR-214ENST00000545445 HAP1P54257 671 aaPredicted RBP16.91■□□□□ 0.3
LTBR-214ENST00000545445 KRT27Q7Z3Y8 459 aa16.91■□□□□ 0.3
LTBR-214ENST00000545445 CABLES1Q8TDN4 633 aa16.91■□□□□ 0.3
LTBR-214ENST00000545445 TECPR2O15040 1411 aa16.9■□□□□ 0.3
LTBR-214ENST00000545445 KRT28Q7Z3Y7 464 aa16.9■□□□□ 0.3
LTBR-214ENST00000545445 KIF1AQ12756 1690 aa16.9■□□□□ 0.3
LTBR-214ENST00000545445 TNS3Q68CZ2 1445 aa16.89■□□□□ 0.29
LTBR-214ENST00000545445 PLCH1Q4KWH8 1693 aa16.89■□□□□ 0.29
LTBR-214ENST00000545445 A0A0G2JS52 829 aa16.89■□□□□ 0.29
LTBR-214ENST00000545445 MYT1Q01538 1121 aa16.89■□□□□ 0.29
LTBR-214ENST00000545445 C14orf93Q9H972 538 aaKnown RBP16.89■□□□□ 0.29
LTBR-214ENST00000545445 FMN2Q9NZ56 1722 aa16.89■□□□□ 0.29
LTBR-214ENST00000545445 ZEB1P37275 1124 aaPredicted RBP16.88■□□□□ 0.29
LTBR-214ENST00000545445 BAG6P46379 1132 aa16.88■□□□□ 0.29
LTBR-214ENST00000545445 ONECUT3O60422 494 aaPredicted RBP16.87■□□□□ 0.29
LTBR-214ENST00000545445 NWD2Q9ULI1 1742 aa16.85■□□□□ 0.29
LTBR-214ENST00000545445 TMEM132EQ6IEE7 984 aa16.85■□□□□ 0.29
LTBR-214ENST00000545445 ABCC11Q96J66 1382 aa16.85■□□□□ 0.29
LTBR-214ENST00000545445 ABCA3Q99758 1704 aa16.84■□□□□ 0.29
LTBR-214ENST00000545445 CFAP70Q5T0N1 1121 aa16.84■□□□□ 0.29
LTBR-214ENST00000545445 LMOD2Q6P5Q4 547 aa16.84■□□□□ 0.29
LTBR-214ENST00000545445 KNDC1Q76NI1 1749 aa16.84■□□□□ 0.29
LTBR-214ENST00000545445 EN1Q05925 392 aaPredicted RBP16.83■□□□□ 0.28
LTBR-214ENST00000545445 R3HDM1Q15032 1099 aaKnown RBP16.83■□□□□ 0.28
LTBR-214ENST00000545445 FAM98CQ17RN3 349 aaKnown RBP16.83■□□□□ 0.28
LTBR-214ENST00000545445 NBPF8Q3BBV2 869 aa16.83■□□□□ 0.28
LTBR-214ENST00000545445 KIAA1210Q9ULL0 1709 aa16.83■□□□□ 0.28
LTBR-214ENST00000545445 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
LTBR-214ENST00000545445 SBNO1A3KN83 1393 aa16.81■□□□□ 0.28
LTBR-214ENST00000545445 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
LTBR-214ENST00000545445 PSME1Q06323 249 aa16.81■□□□□ 0.28
LTBR-214ENST00000545445 FAM182BQ5T319 152 aa16.81■□□□□ 0.28
LTBR-214ENST00000545445 YTHDC2Q9H6S0 1430 aaKnown RBP16.8■□□□□ 0.28
LTBR-214ENST00000545445 ARHGEF10O15013 1369 aa16.8■□□□□ 0.28
LTBR-214ENST00000545445 NRAPQ86VF7 1730 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms