RNA–Protein interactions for RNA: ENST00000545279.5

SMAD5-211, Transcript of SMAD family member 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD5, Length 7,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-211ENST00000545279 LRRC9Q6ZRR7 1453 aa8.2□□□□□ -1.1
SMAD5-211ENST00000545279 XPCQ01831 940 aaPredicted RBP8.2□□□□□ -1.1
SMAD5-211ENST00000545279 ANP32EQ9BTT0 268 aa8.2□□□□□ -1.1
SMAD5-211ENST00000545279 A2MP01023 1474 aa8.2□□□□□ -1.1
SMAD5-211ENST00000545279 ST20-MTHFSA0A0A6YYL1 179 aa8.2□□□□□ -1.1
SMAD5-211ENST00000545279 ANP32BQ92688 251 aaKnown RBP8.2□□□□□ -1.1
SMAD5-211ENST00000545279 CLSTN1O94985 981 aa8.2□□□□□ -1.1
SMAD5-211ENST00000545279 C9orf78Q9NZ63 289 aaPredicted RBP8.2□□□□□ -1.1
SMAD5-211ENST00000545279 RUSC2Q8N2Y8 1516 aa8.2□□□□□ -1.1
SMAD5-211ENST00000545279 TCEAL9Q9UHQ7 104 aa8.19□□□□□ -1.1
SMAD5-211ENST00000545279 RPRD2Q5VT52 1461 aaKnown RBP8.19□□□□□ -1.1
SMAD5-211ENST00000545279 EIF2S2P20042 333 aaKnown RBP8.19□□□□□ -1.1
SMAD5-211ENST00000545279 HSP90AB4PQ58FF6 505 aa8.19□□□□□ -1.1
SMAD5-211ENST00000545279 WDR97A6NE52 1622 aa8.19□□□□□ -1.1
SMAD5-211ENST00000545279 CABP1Q9NZU7 370 aa8.18□□□□□ -1.1
SMAD5-211ENST00000545279 KIF14Q15058 1648 aa8.18□□□□□ -1.1
SMAD5-211ENST00000545279 RIC3Q7Z5B4 369 aa8.18□□□□□ -1.1
SMAD5-211ENST00000545279 CCDC34Q96HJ3 373 aa8.18□□□□□ -1.1
SMAD5-211ENST00000545279 TOMM22Q9NS69 142 aa8.18□□□□□ -1.1
SMAD5-211ENST00000545279 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.18□□□□□ -1.1
SMAD5-211ENST00000545279 HSP90AB3PQ58FF7 597 aa8.18□□□□□ -1.1
SMAD5-211ENST00000545279 FLAD1Q8NFF5 587 aa8.18□□□□□ -1.1
SMAD5-211ENST00000545279 NAP1L2Q9ULW6 460 aaPredicted RBP8.18□□□□□ -1.1
SMAD5-211ENST00000545279 API5Q9BZZ5 524 aaKnown RBP8.18□□□□□ -1.1
SMAD5-211ENST00000545279 ANP32AP39687 249 aaKnown RBP8.17□□□□□ -1.1
SMAD5-211ENST00000545279 SLC4A10Q6U841 1118 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 TSPYL4Q9UJ04 414 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 TRAPPC8Q9Y2L5 1435 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 WASLO00401 505 aaPredicted RBP8.17□□□□□ -1.1
SMAD5-211ENST00000545279 NF2P35240 595 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 MTHFSP49914 203 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 GGNBP2Q9H3C7 697 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 SLAIN2Q9P270 581 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 PANK3Q9H999 370 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 USP21Q9UK80 565 aa8.17□□□□□ -1.1
SMAD5-211ENST00000545279 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.16□□□□□ -1.1
SMAD5-211ENST00000545279 GNL2Q13823 731 aaKnown RBP8.16□□□□□ -1.1
SMAD5-211ENST00000545279 MAGI2Q86UL8 1455 aa8.16□□□□□ -1.1
SMAD5-211ENST00000545279 ARHGEF10O15013 1369 aa8.16□□□□□ -1.1
SMAD5-211ENST00000545279 TULP1O00294 542 aaPredicted RBP8.16□□□□□ -1.1
SMAD5-211ENST00000545279 PTPRKQ15262 1439 aa8.16□□□□□ -1.1
SMAD5-211ENST00000545279 MARCH6O60337 910 aa8.15□□□□□ -1.1
SMAD5-211ENST00000545279 RIMS2Q9UQ26 1411 aa8.15□□□□□ -1.1
SMAD5-211ENST00000545279 TFCP2L1Q9NZI6 479 aa8.15□□□□□ -1.1
SMAD5-211ENST00000545279 TTC21AQ8NDW8 1320 aa8.15□□□□□ -1.1
SMAD5-211ENST00000545279 PARP3Q9Y6F1 533 aa8.15□□□□□ -1.11
SMAD5-211ENST00000545279 YEATS2Q9ULM3 1422 aa8.15□□□□□ -1.11
SMAD5-211ENST00000545279 RRP7AQ9Y3A4 280 aaKnown RBP8.15□□□□□ -1.11
SMAD5-211ENST00000545279 ST5P78524 1137 aa8.14□□□□□ -1.11
SMAD5-211ENST00000545279 G3BP1Q13283 466 aaKnown RBP eCLIP8.14□□□□□ -1.11
SMAD5-211ENST00000545279 RFC4P35249 363 aa8.14□□□□□ -1.11
SMAD5-211ENST00000545279 IFNL2Q8IZJ0 200 aa8.14□□□□□ -1.11
SMAD5-211ENST00000545279 USP47Q96K76 1375 aa8.14□□□□□ -1.11
SMAD5-211ENST00000545279 LMOD1P29536 600 aaPredicted RBP8.13□□□□□ -1.11
SMAD5-211ENST00000545279 JDP2Q8WYK2 163 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 RPGRQ92834 1020 aaKnown RBP8.13□□□□□ -1.11
SMAD5-211ENST00000545279 NCBP3Q53F19 620 aaKnown RBP8.13□□□□□ -1.11
SMAD5-211ENST00000545279 RWDD1Q9H446 243 aaPredicted RBP8.13□□□□□ -1.11
SMAD5-211ENST00000545279 KIF3AQ9Y496 699 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 GOLGA6L22H0YM25 854 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 SYNE3Q6ZMZ3 975 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 TTLL12Q14166 644 aaPredicted RBP8.13□□□□□ -1.11
SMAD5-211ENST00000545279 GPR162Q16538 588 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 VPS53Q5VIR6 699 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 ITPRIPQ8IWB1 547 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 CLEC11AQ9Y240 323 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 ATP10BO94823 1461 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 KDM5BQ9UGL1 1544 aa8.13□□□□□ -1.11
SMAD5-211ENST00000545279 FKBP5Q13451 457 aaPredicted RBP8.13□□□□□ -1.11
SMAD5-211ENST00000545279 CCDC30Q5VVM6 783 aa8.12□□□□□ -1.11
SMAD5-211ENST00000545279 TBC1D2BQ9UPU7 963 aa8.12□□□□□ -1.11
SMAD5-211ENST00000545279 IGHMBP2P38935 993 aaKnown RBP8.12□□□□□ -1.11
SMAD5-211ENST00000545279 FKBP8Q14318 412 aa8.12□□□□□ -1.11
SMAD5-211ENST00000545279 BECN1Q14457 450 aa8.12□□□□□ -1.11
SMAD5-211ENST00000545279 SLC3A2P08195 630 aaKnown RBP8.12□□□□□ -1.11
SMAD5-211ENST00000545279 NINLQ9Y2I6 1382 aa8.12□□□□□ -1.11
SMAD5-211ENST00000545279 MYBBP1AQ9BQG0 1328 aaKnown RBP8.11□□□□□ -1.11
SMAD5-211ENST00000545279 RAD21O60216 631 aa8.11□□□□□ -1.11
SMAD5-211ENST00000545279 ZFYVE16Q7Z3T8 1539 aa8.11□□□□□ -1.11
SMAD5-211ENST00000545279 FAM177BA6PVY3 158 aa8.11□□□□□ -1.11
SMAD5-211ENST00000545279 HTATSF1O43719 755 aaKnown RBP8.11□□□□□ -1.11
SMAD5-211ENST00000545279 RIPK4P57078 832 aa8.11□□□□□ -1.11
SMAD5-211ENST00000545279 BICDL1Q6ZP65 573 aa8.11□□□□□ -1.11
SMAD5-211ENST00000545279 MPHOSPH8Q99549 860 aa8.11□□□□□ -1.11
SMAD5-211ENST00000545279 IL2RBP14784 551 aa8.1□□□□□ -1.11
SMAD5-211ENST00000545279 CPLX2Q6PUV4 134 aaKnown RBP8.1□□□□□ -1.11
SMAD5-211ENST00000545279 QTRT2Q9H974 415 aaKnown RBP8.1□□□□□ -1.11
SMAD5-211ENST00000545279 DHX16O60231 1041 aaKnown RBP8.1□□□□□ -1.11
SMAD5-211ENST00000545279 AKAP17AQ02040 695 aaKnown RBP8.1□□□□□ -1.11
SMAD5-211ENST00000545279 HDAC9Q9UKV0 1011 aa8.1□□□□□ -1.11
SMAD5-211ENST00000545279 CDK13Q14004 1512 aaKnown RBP8.1□□□□□ -1.11
SMAD5-211ENST00000545279 ADAMTS12P58397 1594 aa8.1□□□□□ -1.11
SMAD5-211ENST00000545279 RBM5P52756 815 aaKnown RBP eCLIP8.1□□□□□ -1.11
SMAD5-211ENST00000545279 SLF2Q8IX21 1173 aa8.1□□□□□ -1.11
SMAD5-211ENST00000545279 FBXO41Q8TF61 875 aa8.1□□□□□ -1.11
SMAD5-211ENST00000545279 NPHP4O75161 1426 aaPredicted RBP8.1□□□□□ -1.11
SMAD5-211ENST00000545279 CAMSAP2Q08AD1 1489 aa8.1□□□□□ -1.11
SMAD5-211ENST00000545279 NCOA1Q15788 1441 aa8.09□□□□□ -1.11
SMAD5-211ENST00000545279 MYO1BO43795 1136 aa8.09□□□□□ -1.11
SMAD5-211ENST00000545279 APBA3O96018 575 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms