RNA–Protein interactions for RNA: ENST00000545051.2

SMAD7-202, Transcript of SMAD family member 7, humanhuman

TSL 2

Gene SMAD7, Length 2,211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD7-202ENST00000545051 IFT172Q9UG01 1749 aa18.77■□□□□ 0.6
SMAD7-202ENST00000545051 SKAP1Q86WV1 359 aa18.77■□□□□ 0.59
SMAD7-202ENST00000545051 KIF1BO60333 1816 aa18.76■□□□□ 0.59
SMAD7-202ENST00000545051 VIRMAQ69YN4 1812 aaKnown RBP18.76■□□□□ 0.59
SMAD7-202ENST00000545051 NPATQ14207 1427 aa18.76■□□□□ 0.59
SMAD7-202ENST00000545051 MYO3AQ8NEV4 1616 aa18.76■□□□□ 0.59
SMAD7-202ENST00000545051 TRMT2AQ8IZ69 625 aaKnown RBP18.76■□□□□ 0.59
SMAD7-202ENST00000545051 ARHGAP31Q2M1Z3 1444 aa18.75■□□□□ 0.59
SMAD7-202ENST00000545051 FAM161AQ3B820 660 aa18.75■□□□□ 0.59
SMAD7-202ENST00000545051 ERVK-7P63135 1459 aa18.74■□□□□ 0.59
SMAD7-202ENST00000545051 NGEFQ8N5V2 710 aa18.74■□□□□ 0.59
SMAD7-202ENST00000545051 EFCAB6Q5THR3 1501 aa18.73■□□□□ 0.59
SMAD7-202ENST00000545051 SETD1BQ9UPS6 1966 aaKnown RBP18.72■□□□□ 0.59
SMAD7-202ENST00000545051 E9PSI1 815 aa18.7■□□□□ 0.58
SMAD7-202ENST00000545051 C8orf34Q49A92 452 aa18.7■□□□□ 0.58
SMAD7-202ENST00000545051 PREX1Q8TCU6 1659 aa18.7■□□□□ 0.58
SMAD7-202ENST00000545051 NINLQ9Y2I6 1382 aa18.7■□□□□ 0.58
SMAD7-202ENST00000545051 CCDC146Q8IYE0 955 aa18.7■□□□□ 0.58
SMAD7-202ENST00000545051 DAXXQ9UER7 740 aaPredicted RBP18.7■□□□□ 0.58
SMAD7-202ENST00000545051 TNRQ92752 1358 aa18.68■□□□□ 0.58
SMAD7-202ENST00000545051 APAF1O14727 1248 aa18.68■□□□□ 0.58
SMAD7-202ENST00000545051 FBXO31Q5XUX0 539 aaPredicted RBP18.68■□□□□ 0.58
SMAD7-202ENST00000545051 SPATA31D1Q6ZQQ2 1576 aa18.68■□□□□ 0.58
SMAD7-202ENST00000545051 SBNO2Q9Y2G9 1366 aa18.68■□□□□ 0.58
SMAD7-202ENST00000545051 UGGT1Q9NYU2 1555 aa18.66■□□□□ 0.58
SMAD7-202ENST00000545051 NRXN1Q9ULB1 1477 aa18.66■□□□□ 0.58
SMAD7-202ENST00000545051 CFAP65Q6ZU64 1925 aaKnown RBP18.66■□□□□ 0.58
SMAD7-202ENST00000545051 SETBP1Q9Y6X0 1596 aa18.66■□□□□ 0.58
SMAD7-202ENST00000545051 SHPRHQ149N8 1683 aa18.66■□□□□ 0.58
SMAD7-202ENST00000545051 POLR3AO14802 1390 aaPredicted RBP18.65■□□□□ 0.58
SMAD7-202ENST00000545051 SPINK5Q9NQ38 1064 aaPredicted RBP18.65■□□□□ 0.58
SMAD7-202ENST00000545051 CGNL1Q0VF96 1302 aa18.64■□□□□ 0.57
SMAD7-202ENST00000545051 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
SMAD7-202ENST00000545051 NLRP1Q9C000 1473 aa18.62■□□□□ 0.57
SMAD7-202ENST00000545051 RGS3P49796 1198 aa18.62■□□□□ 0.57
SMAD7-202ENST00000545051 NFKBIBQ15653 356 aa18.62■□□□□ 0.57
SMAD7-202ENST00000545051 USP32Q8NFA0 1604 aa18.62■□□□□ 0.57
SMAD7-202ENST00000545051 BCAR3O75815 825 aa18.62■□□□□ 0.57
SMAD7-202ENST00000545051 PDE3AQ14432 1141 aa18.62■□□□□ 0.57
SMAD7-202ENST00000545051 NOS1P29475 1434 aa18.62■□□□□ 0.57
SMAD7-202ENST00000545051 ADGRB3O60242 1522 aa18.61■□□□□ 0.57
SMAD7-202ENST00000545051 QRICH2Q9H0J4 1663 aa18.61■□□□□ 0.57
SMAD7-202ENST00000545051 CARD14Q9BXL6 1004 aa18.61■□□□□ 0.57
SMAD7-202ENST00000545051 LMTK3Q96Q04 1460 aa18.6■□□□□ 0.57
SMAD7-202ENST00000545051 ADGRF5Q8IZF2 1346 aa18.6■□□□□ 0.57
SMAD7-202ENST00000545051 ZNF142P52746 1687 aaPredicted RBP18.6■□□□□ 0.57
SMAD7-202ENST00000545051 A2ML1A8K2U0 1454 aa18.6■□□□□ 0.57
SMAD7-202ENST00000545051 CENPJQ9HC77 1338 aaPredicted RBP18.6■□□□□ 0.57
SMAD7-202ENST00000545051 CEP170BQ9Y4F5 1589 aaPredicted RBP18.6■□□□□ 0.57
SMAD7-202ENST00000545051 GSE1Q14687 1217 aa18.59■□□□□ 0.57
SMAD7-202ENST00000545051 SLC4A3P48751 1232 aa18.58■□□□□ 0.57
SMAD7-202ENST00000545051 PPLO60437 1756 aa18.58■□□□□ 0.56
SMAD7-202ENST00000545051 IQSEC2Q5JU85 1478 aa18.58■□□□□ 0.56
SMAD7-202ENST00000545051 SLC52A1Q9NWF4 448 aa18.58■□□□□ 0.56
SMAD7-202ENST00000545051 MAPK8IP3Q9UPT6 1336 aa18.58■□□□□ 0.56
SMAD7-202ENST00000545051 CANXP27824 592 aaKnown RBP18.56■□□□□ 0.56
SMAD7-202ENST00000545051 WWC1Q8IX03 1113 aa18.56■□□□□ 0.56
SMAD7-202ENST00000545051 DMRT2Q9Y5R5 561 aa18.56■□□□□ 0.56
SMAD7-202ENST00000545051 NSD3Q9BZ95 1437 aa18.56■□□□□ 0.56
SMAD7-202ENST00000545051 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
SMAD7-202ENST00000545051 IL27Q8NEV9 243 aa18.55■□□□□ 0.56
SMAD7-202ENST00000545051 AAMPQ13685 434 aa18.54■□□□□ 0.56
SMAD7-202ENST00000545051 IGHDP01880 384 aa18.54■□□□□ 0.56
SMAD7-202ENST00000545051 STAG3Q9UJ98 1225 aa18.53■□□□□ 0.56
SMAD7-202ENST00000545051 THEMISQ8N1K5 641 aaPredicted RBP18.53■□□□□ 0.56
SMAD7-202ENST00000545051 IDI1Q13907 227 aa18.52■□□□□ 0.56
SMAD7-202ENST00000545051 PIK3C2BO00750 1634 aa18.52■□□□□ 0.56
SMAD7-202ENST00000545051 MORC1Q86VD1 984 aa18.51■□□□□ 0.55
SMAD7-202ENST00000545051 RUNDC1Q96C34 613 aa18.51■□□□□ 0.55
SMAD7-202ENST00000545051 ADGRB1O14514 1584 aa18.51■□□□□ 0.55
SMAD7-202ENST00000545051 HSPA2P54652 639 aa18.51■□□□□ 0.55
SMAD7-202ENST00000545051 UBR1Q8IWV7 1749 aa18.5■□□□□ 0.55
SMAD7-202ENST00000545051 COG6Q9Y2V7 657 aa18.5■□□□□ 0.55
SMAD7-202ENST00000545051 PMFBP1Q8TBY8 1022 aa18.49■□□□□ 0.55
SMAD7-202ENST00000545051 PANK1Q8TE04 598 aa18.49■□□□□ 0.55
SMAD7-202ENST00000545051 WDR63Q8IWG1 891 aa18.48■□□□□ 0.55
SMAD7-202ENST00000545051 PHF23Q9BUL5 403 aaPredicted RBP18.48■□□□□ 0.55
SMAD7-202ENST00000545051 USP19O94966 1318 aa18.48■□□□□ 0.55
SMAD7-202ENST00000545051 RARSP54136 660 aaKnown RBP18.47■□□□□ 0.55
SMAD7-202ENST00000545051 FRAT1Q92837 279 aaPredicted RBP18.47■□□□□ 0.55
SMAD7-202ENST00000545051 ADGRB2O60241 1585 aa18.46■□□□□ 0.55
SMAD7-202ENST00000545051 CHGAP10645 457 aaKnown RBP18.46■□□□□ 0.55
SMAD7-202ENST00000545051 CCDC27Q2M243 656 aa18.46■□□□□ 0.55
SMAD7-202ENST00000545051 NCBP3Q53F19 620 aaKnown RBP18.46■□□□□ 0.55
SMAD7-202ENST00000545051 ARHGEF28Q8N1W1 1705 aaKnown RBP18.45■□□□□ 0.54
SMAD7-202ENST00000545051 BECN1Q14457 450 aa18.45■□□□□ 0.54
SMAD7-202ENST00000545051 TCP11L2Q8N4U5 519 aa18.45■□□□□ 0.54
SMAD7-202ENST00000545051 CFAP53Q96M91 514 aa18.45■□□□□ 0.54
SMAD7-202ENST00000545051 NSD2O96028 1365 aa18.45■□□□□ 0.54
SMAD7-202ENST00000545051 C14orf93Q9H972 538 aaKnown RBP18.45■□□□□ 0.54
SMAD7-202ENST00000545051 FRAT2O75474 233 aaPredicted RBP18.44■□□□□ 0.54
SMAD7-202ENST00000545051 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
SMAD7-202ENST00000545051 TMEM131LA2VDJ0 1609 aa18.44■□□□□ 0.54
SMAD7-202ENST00000545051 RPGRIP1LQ68CZ1 1315 aa18.43■□□□□ 0.54
SMAD7-202ENST00000545051 NEUROD2Q15784 382 aa18.42■□□□□ 0.54
SMAD7-202ENST00000545051 ANKLE2Q86XL3 938 aa18.42■□□□□ 0.54
SMAD7-202ENST00000545051 SLC12A5Q9H2X9 1139 aa18.42■□□□□ 0.54
SMAD7-202ENST00000545051 HDGFP51858 240 aaKnown RBP18.42■□□□□ 0.54
SMAD7-202ENST00000545051 PUS7Q96PZ0 661 aaKnown RBP18.42■□□□□ 0.54
SMAD7-202ENST00000545051 RRP7AQ9Y3A4 280 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms