RNA–Protein interactions for RNA: ENST00000545046.5

CHFR-224, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 2,186 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-224ENST00000545046 USP32Q8NFA0 1604 aa22.2■■□□□ 1.14
CHFR-224ENST00000545046 SETD1AO15047 1707 aaKnown RBP22.19■■□□□ 1.14
CHFR-224ENST00000545046 ADAMTS8Q9UP79 889 aa22.19■■□□□ 1.14
CHFR-224ENST00000545046 SRPK2P78362 688 aaKnown RBP22.18■■□□□ 1.14
CHFR-224ENST00000545046 IRX6P78412 446 aaPredicted RBP22.18■■□□□ 1.14
CHFR-224ENST00000545046 PDE3BQ13370 1112 aa22.18■■□□□ 1.14
CHFR-224ENST00000545046 ANKRD36BQ8N2N9 1353 aa22.17■■□□□ 1.14
CHFR-224ENST00000545046 NINLQ9Y2I6 1382 aa22.17■■□□□ 1.14
CHFR-224ENST00000545046 SALL2Q9Y467 1007 aaPredicted RBP22.17■■□□□ 1.14
CHFR-224ENST00000545046 MINK1Q8N4C8 1332 aaPredicted RBP22.17■■□□□ 1.14
CHFR-224ENST00000545046 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
CHFR-224ENST00000545046 UBR1Q8IWV7 1749 aa22.16■■□□□ 1.14
CHFR-224ENST00000545046 MORC1Q86VD1 984 aa22.16■■□□□ 1.14
CHFR-224ENST00000545046 CGNL1Q0VF96 1302 aa22.16■■□□□ 1.14
CHFR-224ENST00000545046 ATAD2Q6PL18 1390 aa22.15■■□□□ 1.14
CHFR-224ENST00000545046 NRXN3Q9Y4C0 1643 aa22.14■■□□□ 1.13
CHFR-224ENST00000545046 ABCC11Q96J66 1382 aa22.11■■□□□ 1.13
CHFR-224ENST00000545046 NSD2O96028 1365 aa22.11■■□□□ 1.13
CHFR-224ENST00000545046 NLRP1Q9C000 1473 aa22.1■■□□□ 1.13
CHFR-224ENST00000545046 FER1L4A9Z1Z3 1794 aa22.1■■□□□ 1.13
CHFR-224ENST00000545046 TMEM2Q9UHN6 1383 aa22.1■■□□□ 1.13
CHFR-224ENST00000545046 CDK19Q9BWU1 502 aa22.1■■□□□ 1.13
CHFR-224ENST00000545046 C3P01024 1663 aa22.1■■□□□ 1.13
CHFR-224ENST00000545046 TERF2IPQ9NYB0 399 aa22.09■■□□□ 1.13
CHFR-224ENST00000545046 POLR3AO14802 1390 aaPredicted RBP22.08■■□□□ 1.13
CHFR-224ENST00000545046 RNF123Q5XPI4 1314 aa22.07■■□□□ 1.12
CHFR-224ENST00000545046 CEBPAP49715 358 aaPredicted RBP22.07■■□□□ 1.12
CHFR-224ENST00000545046 WAPLQ7Z5K2 1190 aa22.07■■□□□ 1.12
CHFR-224ENST00000545046 PPP4R2Q9NY27 417 aa22.07■■□□□ 1.12
CHFR-224ENST00000545046 A0A1W2PP64 1363 aa22.06■■□□□ 1.12
CHFR-224ENST00000545046 KNDC1Q76NI1 1749 aa22.06■■□□□ 1.12
CHFR-224ENST00000545046 METP08581 1390 aa22.06■■□□□ 1.12
CHFR-224ENST00000545046 TNNT2P45379 298 aaPredicted RBP22.05■■□□□ 1.12
CHFR-224ENST00000545046 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
CHFR-224ENST00000545046 PLEKHH1Q9ULM0 1364 aa22.03■■□□□ 1.12
CHFR-224ENST00000545046 SIRT1Q96EB6 747 aa22.03■■□□□ 1.12
CHFR-224ENST00000545046 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.12
CHFR-224ENST00000545046 CFAP53Q96M91 514 aa22.01■■□□□ 1.11
CHFR-224ENST00000545046 FAM135BQ49AJ0 1406 aa22■■□□□ 1.11
CHFR-224ENST00000545046 TXNDC2Q86VQ3 553 aa22■■□□□ 1.11
CHFR-224ENST00000545046 RCAN3Q9UKA8 241 aa22■■□□□ 1.11
CHFR-224ENST00000545046 PLEKHG1Q9ULL1 1385 aa22■■□□□ 1.11
CHFR-224ENST00000545046 ANKRD26Q9UPS8 1709 aa22■■□□□ 1.11
CHFR-224ENST00000545046 CD163L1Q9NR16 1453 aa22■■□□□ 1.11
CHFR-224ENST00000545046 CABP1Q9NZU7 370 aa21.99■■□□□ 1.11
CHFR-224ENST00000545046 EID1Q9Y6B2 187 aa21.99■■□□□ 1.11
CHFR-224ENST00000545046 TECPR2O15040 1411 aa21.99■■□□□ 1.11
CHFR-224ENST00000545046 PLPPR3Q6T4P5 718 aa21.99■■□□□ 1.11
CHFR-224ENST00000545046 CCDC146Q8IYE0 955 aa21.99■■□□□ 1.11
CHFR-224ENST00000545046 CPS1P31327 1500 aa21.99■■□□□ 1.11
CHFR-224ENST00000545046 SHPRHQ149N8 1683 aa21.99■■□□□ 1.11
CHFR-224ENST00000545046 MTHFSP49914 203 aa21.98■■□□□ 1.11
CHFR-224ENST00000545046 WASLO00401 505 aaPredicted RBP21.97■■□□□ 1.11
CHFR-224ENST00000545046 LTKP29376 864 aa21.97■■□□□ 1.11
CHFR-224ENST00000545046 ADAMTS13Q76LX8 1427 aa21.96■■□□□ 1.11
CHFR-224ENST00000545046 NGEFQ8N5V2 710 aa21.96■■□□□ 1.11
CHFR-224ENST00000545046 MED14O60244 1454 aa21.96■■□□□ 1.11
CHFR-224ENST00000545046 KIF20BQ96Q89 1820 aa21.96■■□□□ 1.11
CHFR-224ENST00000545046 ATP7BP35670 1465 aa21.95■■□□□ 1.1
CHFR-224ENST00000545046 APAF1O14727 1248 aa21.95■■□□□ 1.1
CHFR-224ENST00000545046 SLIT1O75093 1534 aa21.95■■□□□ 1.1
CHFR-224ENST00000545046 FYB1O15117 783 aa21.94■■□□□ 1.1
CHFR-224ENST00000545046 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
CHFR-224ENST00000545046 GGNBP2Q9H3C7 697 aa21.94■■□□□ 1.1
CHFR-224ENST00000545046 ZNF521Q96K83 1311 aa21.94■■□□□ 1.1
CHFR-224ENST00000545046 RRP1P56182 461 aaKnown RBP21.94■■□□□ 1.1
CHFR-224ENST00000545046 THEMISQ8N1K5 641 aaPredicted RBP21.94■■□□□ 1.1
CHFR-224ENST00000545046 ARHGAP23Q9P227 1491 aa21.93■■□□□ 1.1
CHFR-224ENST00000545046 PPIP5K1Q6PFW1 1433 aa21.89■■□□□ 1.1
CHFR-224ENST00000545046 RUNDC1Q96C34 613 aa21.89■■□□□ 1.09
CHFR-224ENST00000545046 NUDT16Q96DE0 195 aaKnown RBP21.88■■□□□ 1.09
CHFR-224ENST00000545046 ROBO2Q9HCK4 1378 aa21.88■■□□□ 1.09
CHFR-224ENST00000545046 B4GALNT3Q6L9W6 998 aa21.88■■□□□ 1.09
CHFR-224ENST00000545046 TSHZ2Q9NRE2 1034 aa21.88■■□□□ 1.09
CHFR-224ENST00000545046 DUSP27Q5VZP5 1158 aa21.87■■□□□ 1.09
CHFR-224ENST00000545046 SLC26A8Q96RN1 970 aa21.87■■□□□ 1.09
CHFR-224ENST00000545046 SLFN5Q08AF3 891 aa21.87■■□□□ 1.09
CHFR-224ENST00000545046 RIMS1Q86UR5 1692 aaKnown RBP21.86■■□□□ 1.09
CHFR-224ENST00000545046 CCDC61Q9Y6R9 512 aa21.86■■□□□ 1.09
CHFR-224ENST00000545046 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.85■■□□□ 1.09
CHFR-224ENST00000545046 TBX22Q9Y458 520 aa21.85■■□□□ 1.09
CHFR-224ENST00000545046 CPSF1Q10570 1443 aaKnown RBP21.85■■□□□ 1.09
CHFR-224ENST00000545046 EDC4Q6P2E9 1401 aaKnown RBP21.84■■□□□ 1.09
CHFR-224ENST00000545046 ADGRB2O60241 1585 aa21.84■■□□□ 1.09
CHFR-224ENST00000545046 ITSN1Q15811 1721 aa21.84■■□□□ 1.09
CHFR-224ENST00000545046 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.84■■□□□ 1.09
CHFR-224ENST00000545046 DIP2AQ14689 1571 aa21.83■■□□□ 1.09
CHFR-224ENST00000545046 CDC42BPGQ6DT37 1551 aa21.83■■□□□ 1.09
CHFR-224ENST00000545046 E9PSI1 815 aa21.82■■□□□ 1.08
CHFR-224ENST00000545046 U2AF1L5P0DN76 240 aaPredicted RBP21.82■■□□□ 1.08
CHFR-224ENST00000545046 U2AF1Q01081 240 aaKnown RBP eCLIP21.82■■□□□ 1.08
CHFR-224ENST00000545046 TRMT2AQ8IZ69 625 aaKnown RBP21.82■■□□□ 1.08
CHFR-224ENST00000545046 AKAP12Q02952 1782 aa21.82■■□□□ 1.08
CHFR-224ENST00000545046 PTPRUQ92729 1446 aa21.82■■□□□ 1.08
CHFR-224ENST00000545046 CCDC136Q96JN2 1154 aa21.81■■□□□ 1.08
CHFR-224ENST00000545046 MON2Q7Z3U7 1717 aa21.81■■□□□ 1.08
CHFR-224ENST00000545046 CEP170BQ9Y4F5 1589 aaPredicted RBP21.81■■□□□ 1.08
CHFR-224ENST00000545046 TCP11L2Q8N4U5 519 aa21.81■■□□□ 1.08
CHFR-224ENST00000545046 AMOTL2Q9Y2J4 779 aa21.81■■□□□ 1.08
CHFR-224ENST00000545046 ZNF692Q9BU19 519 aaPredicted RBP21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms