RNA–Protein interactions for RNA: ENST00000544872.1

CIT-216, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 524 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-216ENST00000544872 BRWD3Q6RI45 1802 aa13.92□□□□□ -0.18
CIT-216ENST00000544872 CAMTA1Q9Y6Y1 1673 aa13.91□□□□□ -0.18
CIT-216ENST00000544872 LMTK2Q8IWU2 1503 aa13.91□□□□□ -0.18
CIT-216ENST00000544872 IDI1Q13907 227 aa13.91□□□□□ -0.18
CIT-216ENST00000544872 EZH2Q15910 746 aaKnown RBP13.9□□□□□ -0.18
CIT-216ENST00000544872 UNC5CLQ8IV45 518 aa13.9□□□□□ -0.18
CIT-216ENST00000544872 MST1RQ04912 1400 aa13.9□□□□□ -0.19
CIT-216ENST00000544872 TBX22Q9Y458 520 aa13.89□□□□□ -0.19
CIT-216ENST00000544872 CEP152O94986 1710 aa13.89□□□□□ -0.19
CIT-216ENST00000544872 SPHKAPQ2M3C7 1700 aa13.89□□□□□ -0.19
CIT-216ENST00000544872 DCCP43146 1447 aa13.89□□□□□ -0.19
CIT-216ENST00000544872 PLEKHG1Q9ULL1 1385 aa13.87□□□□□ -0.19
CIT-216ENST00000544872 KCNQ2O43526 872 aa13.87□□□□□ -0.19
CIT-216ENST00000544872 ZNF326Q5BKZ1 582 aaKnown RBP13.87□□□□□ -0.19
CIT-216ENST00000544872 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.87□□□□□ -0.19
CIT-216ENST00000544872 PCDH10Q9P2E7 1040 aa13.87□□□□□ -0.19
CIT-216ENST00000544872 GLI3P10071 1580 aa13.87□□□□□ -0.19
CIT-216ENST00000544872 NBPF8Q3BBV2 869 aa13.85□□□□□ -0.19
CIT-216ENST00000544872 NBPF14Q5TI25 921 aa13.85□□□□□ -0.19
CIT-216ENST00000544872 AMOTL2Q9Y2J4 779 aa13.85□□□□□ -0.19
CIT-216ENST00000544872 PCGF6Q9BYE7 350 aa13.84□□□□□ -0.19
CIT-216ENST00000544872 NOS1P29475 1434 aa13.82□□□□□ -0.2
CIT-216ENST00000544872 GCC2Q8IWJ2 1684 aa13.82□□□□□ -0.2
CIT-216ENST00000544872 CHD4Q14839 1912 aa13.81□□□□□ -0.2
CIT-216ENST00000544872 SOS2Q07890 1332 aaPredicted RBP13.81□□□□□ -0.2
CIT-216ENST00000544872 IQGAP3Q86VI3 1631 aa13.8□□□□□ -0.2
CIT-216ENST00000544872 FAM182BQ5T319 152 aa13.8□□□□□ -0.2
CIT-216ENST00000544872 CCDC144AA2RUR9 1427 aa13.8□□□□□ -0.2
CIT-216ENST00000544872 RGPD1P0DJD0 1748 aa13.79□□□□□ -0.2
CIT-216ENST00000544872 PRELPP51888 382 aa13.79□□□□□ -0.2
CIT-216ENST00000544872 PIK3R4Q99570 1358 aa13.79□□□□□ -0.2
CIT-216ENST00000544872 MYOM2P54296 1465 aa13.79□□□□□ -0.2
CIT-216ENST00000544872 ADGRB3O60242 1522 aa13.79□□□□□ -0.2
CIT-216ENST00000544872 VGFO15240 615 aaPredicted RBP13.78□□□□□ -0.2
CIT-216ENST00000544872 CAMKK2Q96RR4 588 aa13.78□□□□□ -0.2
CIT-216ENST00000544872 RPGRIP1LQ68CZ1 1315 aa13.78□□□□□ -0.2
CIT-216ENST00000544872 RIMS2Q9UQ26 1411 aa13.78□□□□□ -0.2
CIT-216ENST00000544872 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.78□□□□□ -0.2
CIT-216ENST00000544872 DISP2A7MBM2 1401 aa13.77□□□□□ -0.21
CIT-216ENST00000544872 VPS72Q15906 364 aa13.77□□□□□ -0.21
CIT-216ENST00000544872 ONECUT3O60422 494 aaPredicted RBP13.76□□□□□ -0.21
CIT-216ENST00000544872 APBA3O96018 575 aa13.76□□□□□ -0.21
CIT-216ENST00000544872 HSPA6P17066 643 aa13.76□□□□□ -0.21
CIT-216ENST00000544872 RGL3Q3MIN7 710 aa13.76□□□□□ -0.21
CIT-216ENST00000544872 ORAI2Q96SN7 254 aa13.76□□□□□ -0.21
CIT-216ENST00000544872 UTRNP46939 3433 aa13.76□□□□□ -0.21
CIT-216ENST00000544872 FAM83GA6ND36 823 aa13.75□□□□□ -0.21
CIT-216ENST00000544872 HAP1P54257 671 aaPredicted RBP13.75□□□□□ -0.21
CIT-216ENST00000544872 TNS4Q8IZW8 715 aa13.75□□□□□ -0.21
CIT-216ENST00000544872 SLIT2O94813 1529 aa13.74□□□□□ -0.21
CIT-216ENST00000544872 MARF1Q9Y4F3 1742 aaKnown RBP13.74□□□□□ -0.21
CIT-216ENST00000544872 FAM98CQ17RN3 349 aaKnown RBP13.74□□□□□ -0.21
CIT-216ENST00000544872 STAC3Q96MF2 364 aa13.74□□□□□ -0.21
CIT-216ENST00000544872 COL22A1Q8NFW1 1626 aaPredicted RBP13.74□□□□□ -0.21
CIT-216ENST00000544872 TRPM2O94759 1503 aa13.74□□□□□ -0.21
CIT-216ENST00000544872 C1orf167Q5SNV9 1468 aa13.74□□□□□ -0.21
CIT-216ENST00000544872 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
CIT-216ENST00000544872 ADGRL3Q9HAR2 1447 aa13.73□□□□□ -0.21
CIT-216ENST00000544872 TRIM37O94972 964 aa13.73□□□□□ -0.21
CIT-216ENST00000544872 COL13A1Q5TAT6 717 aaPredicted RBP13.73□□□□□ -0.21
CIT-216ENST00000544872 ADAMTS13Q76LX8 1427 aa13.73□□□□□ -0.21
CIT-216ENST00000544872 PARD3Q8TEW0 1356 aa13.72□□□□□ -0.21
CIT-216ENST00000544872 ADGRB2O60241 1585 aa13.71□□□□□ -0.21
CIT-216ENST00000544872 PTPRUQ92729 1446 aa13.71□□□□□ -0.22
CIT-216ENST00000544872 XPCQ01831 940 aaPredicted RBP13.7□□□□□ -0.22
CIT-216ENST00000544872 GPR162Q16538 588 aa13.7□□□□□ -0.22
CIT-216ENST00000544872 SYT17Q9BSW7 474 aa13.69□□□□□ -0.22
CIT-216ENST00000544872 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
CIT-216ENST00000544872 ANKRD30BQ9BXX2 1392 aa13.69□□□□□ -0.22
CIT-216ENST00000544872 NPHP3Q7Z494 1330 aa13.68□□□□□ -0.22
CIT-216ENST00000544872 PLEKHG5O94827 1062 aa13.68□□□□□ -0.22
CIT-216ENST00000544872 E9PCH4 1651 aa13.68□□□□□ -0.22
CIT-216ENST00000544872 NRKQ7Z2Y5 1582 aa13.67□□□□□ -0.22
CIT-216ENST00000544872 NEUROD1Q13562 356 aa13.67□□□□□ -0.22
CIT-216ENST00000544872 LAMC1P11047 1609 aa13.66□□□□□ -0.22
CIT-216ENST00000544872 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
CIT-216ENST00000544872 CCER1Q8TC90 406 aaPredicted RBP13.66□□□□□ -0.22
CIT-216ENST00000544872 TNS1Q9HBL0 1735 aaKnown RBP13.66□□□□□ -0.22
CIT-216ENST00000544872 PELP1Q8IZL8 1130 aaKnown RBP13.65□□□□□ -0.22
CIT-216ENST00000544872 DCAF11Q8TEB1 546 aa13.65□□□□□ -0.22
CIT-216ENST00000544872 KDM2AQ9Y2K7 1162 aa13.65□□□□□ -0.22
CIT-216ENST00000544872 FAM196AQ6ZSG2 479 aa13.64□□□□□ -0.23
CIT-216ENST00000544872 ATF5Q9Y2D1 282 aaPredicted RBP13.64□□□□□ -0.23
CIT-216ENST00000544872 ESCO1Q5FWF5 840 aa13.63□□□□□ -0.23
CIT-216ENST00000544872 FOXO3O43524 673 aa13.62□□□□□ -0.23
CIT-216ENST00000544872 MYO5BQ9ULV0 1848 aa13.62□□□□□ -0.23
CIT-216ENST00000544872 DHX57Q6P158 1386 aaKnown RBP13.61□□□□□ -0.23
CIT-216ENST00000544872 CLSPNQ9HAW4 1339 aa13.61□□□□□ -0.23
CIT-216ENST00000544872 NUP188Q5SRE5 1749 aa13.6□□□□□ -0.23
CIT-216ENST00000544872 GPBP1L1Q9HC44 474 aaPredicted RBP13.6□□□□□ -0.23
CIT-216ENST00000544872 MYOM1P52179 1685 aa13.59□□□□□ -0.23
CIT-216ENST00000544872 TMEM131LA2VDJ0 1609 aa13.59□□□□□ -0.23
CIT-216ENST00000544872 DLC1Q96QB1 1528 aa13.59□□□□□ -0.23
CIT-216ENST00000544872 NALCNQ8IZF0 1738 aa13.59□□□□□ -0.23
CIT-216ENST00000544872 TONSLQ96HA7 1378 aa13.58□□□□□ -0.23
CIT-216ENST00000544872 USP32Q8NFA0 1604 aa13.58□□□□□ -0.24
CIT-216ENST00000544872 PTGER2P43116 358 aa13.58□□□□□ -0.24
CIT-216ENST00000544872 SIN3AQ96ST3 1273 aa13.58□□□□□ -0.24
CIT-216ENST00000544872 RREB1Q92766 1687 aa13.58□□□□□ -0.24
CIT-216ENST00000544872 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms