RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 ATF3P18847 181 aa24.15■■□□□ 1.46
BPTF-208ENST00000544778 ATP2B2Q01814 1243 aa24.15■■□□□ 1.46
BPTF-208ENST00000544778 ANKRD62A6NC57 917 aa24.14■■□□□ 1.46
BPTF-208ENST00000544778 L3MBTL2Q969R5 705 aa24.14■■□□□ 1.45
BPTF-208ENST00000544778 GSE1Q14687 1217 aa24.13■■□□□ 1.45
BPTF-208ENST00000544778 NAT10Q9H0A0 1025 aaKnown RBP24.13■■□□□ 1.45
BPTF-208ENST00000544778 PDE4AP27815 886 aa24.12■■□□□ 1.45
BPTF-208ENST00000544778 RAPGEF4Q8WZA2 1011 aa24.12■■□□□ 1.45
BPTF-208ENST00000544778 BRPF1P55201 1214 aaPredicted RBP24.12■■□□□ 1.45
BPTF-208ENST00000544778 INTS3Q68E01 1043 aaKnown RBP24.12■■□□□ 1.45
BPTF-208ENST00000544778 KRT18P05783 430 aaKnown RBP24.12■■□□□ 1.45
BPTF-208ENST00000544778 DIAPH1O60610 1272 aaKnown RBP24.12■■□□□ 1.45
BPTF-208ENST00000544778 DDX19BQ9UMR2 479 aa24.12■■□□□ 1.45
BPTF-208ENST00000544778 H0YHG0 523 aa24.11■■□□□ 1.45
BPTF-208ENST00000544778 NUTM2GQ5VZR2 741 aa24.11■■□□□ 1.45
BPTF-208ENST00000544778 KANK4Q5T7N3 995 aaPredicted RBP24.11■■□□□ 1.45
BPTF-208ENST00000544778 MAGEC2Q9UBF1 373 aaPredicted RBP24.11■■□□□ 1.45
BPTF-208ENST00000544778 ATP2B1P20020 1258 aa24.1■■□□□ 1.45
BPTF-208ENST00000544778 UACAQ9BZF9 1416 aa24.1■■□□□ 1.45
BPTF-208ENST00000544778 ZRSR2Q15696 482 aaKnown RBP24.09■■□□□ 1.45
BPTF-208ENST00000544778 STK11IPQ8N1F8 1099 aa24.08■■□□□ 1.45
BPTF-208ENST00000544778 EXOC6Q8TAG9 804 aa24.08■■□□□ 1.45
BPTF-208ENST00000544778 VGFO15240 615 aaPredicted RBP24.08■■□□□ 1.45
BPTF-208ENST00000544778 CCDC97Q96F63 343 aaPredicted RBP24.08■■□□□ 1.44
BPTF-208ENST00000544778 ST20-MTHFSA0A0A6YYL1 179 aa24.07■■□□□ 1.44
BPTF-208ENST00000544778 HMOX1P09601 288 aa24.07■■□□□ 1.44
BPTF-208ENST00000544778 IBSPP21815 317 aaPredicted RBP24.07■■□□□ 1.44
BPTF-208ENST00000544778 SDF4Q9BRK5 362 aa24.07■■□□□ 1.44
BPTF-208ENST00000544778 CCDC144AA2RUR9 1427 aa24.07■■□□□ 1.44
BPTF-208ENST00000544778 SEPT7Q16181 437 aaKnown RBP24.07■■□□□ 1.44
BPTF-208ENST00000544778 FMN1Q68DA7 1419 aa24.07■■□□□ 1.44
BPTF-208ENST00000544778 SART3Q15020 963 aaKnown RBP24.06■■□□□ 1.44
BPTF-208ENST00000544778 KIF6Q6ZMV9 814 aa24.06■■□□□ 1.44
BPTF-208ENST00000544778 NINLQ9Y2I6 1382 aa24.05■■□□□ 1.44
BPTF-208ENST00000544778 SMC2O95347 1197 aa24.05■■□□□ 1.44
BPTF-208ENST00000544778 API5Q9BZZ5 524 aaKnown RBP24.05■■□□□ 1.44
BPTF-208ENST00000544778 NLRP2Q9NX02 1062 aa24.05■■□□□ 1.44
BPTF-208ENST00000544778 WASHC2AQ641Q2 1341 aa24.05■■□□□ 1.44
BPTF-208ENST00000544778 SLC3A2P08195 630 aaKnown RBP24.05■■□□□ 1.44
BPTF-208ENST00000544778 TBC1D2BQ9UPU7 963 aa24.05■■□□□ 1.44
BPTF-208ENST00000544778 HSP90AB4PQ58FF6 505 aa24.04■■□□□ 1.44
BPTF-208ENST00000544778 DZIP1LQ8IYY4 767 aaKnown RBP24.04■■□□□ 1.44
BPTF-208ENST00000544778 DNAJC2Q99543 621 aaKnown RBP24.04■■□□□ 1.44
BPTF-208ENST00000544778 TSHZ2Q9NRE2 1034 aa24.04■■□□□ 1.44
BPTF-208ENST00000544778 RRP1P56182 461 aaKnown RBP24.04■■□□□ 1.44
BPTF-208ENST00000544778 APAF1O14727 1248 aa24.04■■□□□ 1.44
BPTF-208ENST00000544778 PDCL3Q9H2J4 239 aa24.04■■□□□ 1.44
BPTF-208ENST00000544778 ZHX3Q9H4I2 956 aa24.03■■□□□ 1.44
BPTF-208ENST00000544778 SF3B2Q13435 895 aaKnown RBP24.03■■□□□ 1.44
BPTF-208ENST00000544778 TXLNAP40222 546 aa24.02■■□□□ 1.44
BPTF-208ENST00000544778 SMARCE1Q969G3 411 aa24.02■■□□□ 1.44
BPTF-208ENST00000544778 LNPKQ9C0E8 428 aa24.01■■□□□ 1.43
BPTF-208ENST00000544778 DHX37Q8IY37 1157 aaKnown RBP24.01■■□□□ 1.43
BPTF-208ENST00000544778 ERCC4Q92889 916 aaPredicted RBP24.01■■□□□ 1.43
BPTF-208ENST00000544778 PPM1FP49593 454 aaPredicted RBP24.01■■□□□ 1.43
BPTF-208ENST00000544778 CNTROBQ8N137 903 aa24.01■■□□□ 1.43
BPTF-208ENST00000544778 FSD1Q9BTV5 496 aa24■■□□□ 1.43
BPTF-208ENST00000544778 PSMA5P28066 241 aa24■■□□□ 1.43
BPTF-208ENST00000544778 RBM5P52756 815 aaKnown RBP eCLIP24■■□□□ 1.43
BPTF-208ENST00000544778 ENOX2Q16206 610 aaKnown RBP24■■□□□ 1.43
BPTF-208ENST00000544778 FILIP1LQ4L180 1135 aa24■■□□□ 1.43
BPTF-208ENST00000544778 RBM42Q9BTD8 480 aaKnown RBP24■■□□□ 1.43
BPTF-208ENST00000544778 PDZRN4Q6ZMN7 1036 aaPredicted RBP24■■□□□ 1.43
BPTF-208ENST00000544778 UBTFL1P0CB47 393 aaPredicted RBP24■■□□□ 1.43
BPTF-208ENST00000544778 MATR3P43243 847 aaKnown RBP eCLIP24■■□□□ 1.43
BPTF-208ENST00000544778 ZSCAN21Q9Y5A6 473 aaPredicted RBP24■■□□□ 1.43
BPTF-208ENST00000544778 SOGA1O94964 1423 aa23.99■■□□□ 1.43
BPTF-208ENST00000544778 NUCB2P80303 420 aa23.99■■□□□ 1.43
BPTF-208ENST00000544778 FMNL2Q96PY5 1086 aa23.99■■□□□ 1.43
BPTF-208ENST00000544778 CCDC18Q5T9S5 1454 aa23.99■■□□□ 1.43
BPTF-208ENST00000544778 ERLIN2O94905 339 aa23.98■■□□□ 1.43
BPTF-208ENST00000544778 CHMP5Q9NZZ3 219 aa23.98■■□□□ 1.43
BPTF-208ENST00000544778 CEBPZQ03701 1054 aaKnown RBP23.97■■□□□ 1.43
BPTF-208ENST00000544778 TSPYL1Q9H0U9 437 aa23.97■■□□□ 1.43
BPTF-208ENST00000544778 AXDND1Q5T1B0 1012 aaPredicted RBP23.97■■□□□ 1.43
BPTF-208ENST00000544778 TTC39AQ5SRH9 613 aa23.97■■□□□ 1.43
BPTF-208ENST00000544778 ZNF428Q96B54 188 aa23.96■■□□□ 1.43
BPTF-208ENST00000544778 ANKRD18AQ8IVF6 992 aa23.96■■□□□ 1.43
BPTF-208ENST00000544778 RSPH4AQ5TD94 716 aa23.96■■□□□ 1.43
BPTF-208ENST00000544778 CYB5RLQ6IPT4 315 aa23.96■■□□□ 1.43
BPTF-208ENST00000544778 CNNM1Q9NRU3 951 aa23.96■■□□□ 1.43
BPTF-208ENST00000544778 NEBLO76041 1014 aa23.95■■□□□ 1.42
BPTF-208ENST00000544778 MPHOSPH10O00566 681 aaKnown RBP23.94■■□□□ 1.42
BPTF-208ENST00000544778 TRIM5Q9C035 493 aa23.94■■□□□ 1.42
BPTF-208ENST00000544778 TANGO6Q9C0B7 1094 aa23.94■■□□□ 1.42
BPTF-208ENST00000544778 CWC15Q9P013 229 aaKnown RBP23.94■■□□□ 1.42
BPTF-208ENST00000544778 STRN4Q9NRL3 753 aa23.94■■□□□ 1.42
BPTF-208ENST00000544778 TDRD9Q8NDG6 1382 aaKnown RBP23.93■■□□□ 1.42
BPTF-208ENST00000544778 FAM43AQ8N2R8 423 aa23.93■■□□□ 1.42
BPTF-208ENST00000544778 RNF214Q8ND24 703 aa23.92■■□□□ 1.42
BPTF-208ENST00000544778 SEPT11Q9NVA2 429 aaKnown RBP23.92■■□□□ 1.42
BPTF-208ENST00000544778 KINO60870 393 aaKnown RBP23.92■■□□□ 1.42
BPTF-208ENST00000544778 DEF6Q9H4E7 631 aa23.91■■□□□ 1.42
BPTF-208ENST00000544778 GOLGA6L10A6NI86 522 aa23.91■■□□□ 1.42
BPTF-208ENST00000544778 HSP90AB3PQ58FF7 597 aa23.9■■□□□ 1.42
BPTF-208ENST00000544778 VPS8Q8N3P4 1428 aa23.9■■□□□ 1.42
BPTF-208ENST00000544778 CT47B1P0C2W7 299 aaPredicted RBP23.9■■□□□ 1.42
BPTF-208ENST00000544778 ZNHIT6Q9NWK9 470 aaKnown RBP23.9■■□□□ 1.42
BPTF-208ENST00000544778 CCDC39Q9UFE4 941 aa23.9■■□□□ 1.42
BPTF-208ENST00000544778 GNAI1P63096 354 aa23.89■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms