RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 ADGRB2O60241 1585 aa18.56■□□□□ 0.56
DDX11-227ENST00000544652 STK26Q9P289 416 aa18.56■□□□□ 0.56
DDX11-227ENST00000544652 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
DDX11-227ENST00000544652 NCOA3Q9Y6Q9 1424 aa18.55■□□□□ 0.56
DDX11-227ENST00000544652 EIF3AQ14152 1382 aaKnown RBP18.55■□□□□ 0.56
DDX11-227ENST00000544652 USP47Q96K76 1375 aa18.54■□□□□ 0.56
DDX11-227ENST00000544652 RGPD8O14715 1765 aaPredicted RBP18.52■□□□□ 0.55
DDX11-227ENST00000544652 PLEKHH1Q9ULM0 1364 aa18.52■□□□□ 0.55
DDX11-227ENST00000544652 FMN2Q9NZ56 1722 aa18.52■□□□□ 0.55
DDX11-227ENST00000544652 SBNO2Q9Y2G9 1366 aa18.51■□□□□ 0.55
DDX11-227ENST00000544652 CDC42BPGQ6DT37 1551 aa18.51■□□□□ 0.55
DDX11-227ENST00000544652 PRAM1Q96QH2 718 aa18.5■□□□□ 0.55
DDX11-227ENST00000544652 WAPLQ7Z5K2 1190 aa18.49■□□□□ 0.55
DDX11-227ENST00000544652 PROSER2Q86WR7 435 aaPredicted RBP18.49■□□□□ 0.55
DDX11-227ENST00000544652 ADGRL3Q9HAR2 1447 aa18.49■□□□□ 0.55
DDX11-227ENST00000544652 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
DDX11-227ENST00000544652 IQSEC2Q5JU85 1478 aa18.48■□□□□ 0.55
DDX11-227ENST00000544652 TMEM94Q12767 1356 aa18.48■□□□□ 0.55
DDX11-227ENST00000544652 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.55
DDX11-227ENST00000544652 ITSN1Q15811 1721 aa18.46■□□□□ 0.55
DDX11-227ENST00000544652 POGKQ9P215 609 aa18.46■□□□□ 0.55
DDX11-227ENST00000544652 USP32Q8NFA0 1604 aa18.45■□□□□ 0.54
DDX11-227ENST00000544652 TULP4Q9NRJ4 1543 aa18.45■□□□□ 0.54
DDX11-227ENST00000544652 ST20-MTHFSA0A0A6YYL1 179 aa18.45■□□□□ 0.54
DDX11-227ENST00000544652 DCCP43146 1447 aa18.45■□□□□ 0.54
DDX11-227ENST00000544652 TESK2Q96S53 571 aa18.44■□□□□ 0.54
DDX11-227ENST00000544652 TOPAZ1Q8N9V7 1692 aa18.44■□□□□ 0.54
DDX11-227ENST00000544652 HSPA5P11021 654 aaKnown RBP18.43■□□□□ 0.54
DDX11-227ENST00000544652 RBM33Q96EV2 1170 aaKnown RBP18.43■□□□□ 0.54
DDX11-227ENST00000544652 SAFB2Q14151 953 aaKnown RBP eCLIP18.41■□□□□ 0.54
DDX11-227ENST00000544652 C19orf44Q9H6X5 657 aa18.41■□□□□ 0.54
DDX11-227ENST00000544652 SLC24A1O60721 1099 aa18.4■□□□□ 0.54
DDX11-227ENST00000544652 MINK1Q8N4C8 1332 aaPredicted RBP18.4■□□□□ 0.54
DDX11-227ENST00000544652 MSH6P52701 1360 aa18.4■□□□□ 0.54
DDX11-227ENST00000544652 MYOM1P52179 1685 aa18.38■□□□□ 0.53
DDX11-227ENST00000544652 WASLO00401 505 aaPredicted RBP18.36■□□□□ 0.53
DDX11-227ENST00000544652 C14orf37Q86TY3 774 aa18.36■□□□□ 0.53
DDX11-227ENST00000544652 HIRIP3Q9BW71 556 aaPredicted RBP18.36■□□□□ 0.53
DDX11-227ENST00000544652 AKAP12Q02952 1782 aa18.35■□□□□ 0.53
DDX11-227ENST00000544652 KIF1AQ12756 1690 aa18.35■□□□□ 0.53
DDX11-227ENST00000544652 ATP7BP35670 1465 aa18.35■□□□□ 0.53
DDX11-227ENST00000544652 MST1RQ04912 1400 aa18.35■□□□□ 0.53
DDX11-227ENST00000544652 ANKARQ7Z5J8 1434 aa18.35■□□□□ 0.53
DDX11-227ENST00000544652 EVC2Q86UK5 1308 aa18.35■□□□□ 0.53
DDX11-227ENST00000544652 CERKQ8TCT0 537 aa18.35■□□□□ 0.53
DDX11-227ENST00000544652 DISP3Q9P2K9 1392 aa18.34■□□□□ 0.53
DDX11-227ENST00000544652 PUS7Q96PZ0 661 aaKnown RBP18.34■□□□□ 0.53
DDX11-227ENST00000544652 TMF1P82094 1093 aa18.33■□□□□ 0.52
DDX11-227ENST00000544652 CADPS2Q86UW7 1296 aa18.33■□□□□ 0.52
DDX11-227ENST00000544652 CDK19Q9BWU1 502 aa18.33■□□□□ 0.52
DDX11-227ENST00000544652 ATF3P18847 181 aa18.31■□□□□ 0.52
DDX11-227ENST00000544652 C1orf167Q5SNV9 1468 aa18.31■□□□□ 0.52
DDX11-227ENST00000544652 ROBO1Q9Y6N7 1651 aa18.31■□□□□ 0.52
DDX11-227ENST00000544652 NHSL1Q5SYE7 1610 aa18.31■□□□□ 0.52
DDX11-227ENST00000544652 HOXD11P31277 338 aaPredicted RBP18.3■□□□□ 0.52
DDX11-227ENST00000544652 MON2Q7Z3U7 1717 aa18.29■□□□□ 0.52
DDX11-227ENST00000544652 PRR36Q9H6K5 1346 aa18.29■□□□□ 0.52
DDX11-227ENST00000544652 ATAD2Q6PL18 1390 aa18.29■□□□□ 0.52
DDX11-227ENST00000544652 C11orf95C9JLR9 678 aaPredicted RBP18.28■□□□□ 0.52
DDX11-227ENST00000544652 CDCA8Q53HL2 280 aa18.28■□□□□ 0.52
DDX11-227ENST00000544652 SRPK2P78362 688 aaKnown RBP18.27■□□□□ 0.52
DDX11-227ENST00000544652 CABP2Q9NPB3 220 aa18.27■□□□□ 0.52
DDX11-227ENST00000544652 NUDT16Q96DE0 195 aaKnown RBP18.26■□□□□ 0.51
DDX11-227ENST00000544652 SLAIN2Q9P270 581 aa18.25■□□□□ 0.51
DDX11-227ENST00000544652 KIF7Q2M1P5 1343 aa18.24■□□□□ 0.51
DDX11-227ENST00000544652 TOM1O60784 492 aa18.24■□□□□ 0.51
DDX11-227ENST00000544652 CCDC61Q9Y6R9 512 aa18.24■□□□□ 0.51
DDX11-227ENST00000544652 CCDC7Q96M83 1385 aa18.24■□□□□ 0.51
DDX11-227ENST00000544652 NINLQ9Y2I6 1382 aa18.24■□□□□ 0.51
DDX11-227ENST00000544652 NRKQ7Z2Y5 1582 aa18.24■□□□□ 0.51
DDX11-227ENST00000544652 PPIP5K1Q6PFW1 1433 aa18.23■□□□□ 0.51
DDX11-227ENST00000544652 TRPM3Q9HCF6 1732 aaPredicted RBP18.23■□□□□ 0.51
DDX11-227ENST00000544652 NUTM2FA1L443 756 aa18.23■□□□□ 0.51
DDX11-227ENST00000544652 WASHC2AQ641Q2 1341 aa18.23■□□□□ 0.51
DDX11-227ENST00000544652 CD163L1Q9NR16 1453 aa18.22■□□□□ 0.51
DDX11-227ENST00000544652 AHDC1Q5TGY3 1603 aaPredicted RBP18.22■□□□□ 0.51
DDX11-227ENST00000544652 PLEKHG3A1L390 1219 aa18.21■□□□□ 0.51
DDX11-227ENST00000544652 PHLPP1O60346 1717 aa18.2■□□□□ 0.5
DDX11-227ENST00000544652 POLR3AO14802 1390 aaPredicted RBP18.2■□□□□ 0.5
DDX11-227ENST00000544652 ORAI2Q96SN7 254 aa18.2■□□□□ 0.5
DDX11-227ENST00000544652 UBAP1LF5GYI3 381 aa18.19■□□□□ 0.5
DDX11-227ENST00000544652 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
DDX11-227ENST00000544652 KIF20BQ96Q89 1820 aa18.19■□□□□ 0.5
DDX11-227ENST00000544652 ZNF316A6NFI3 1004 aaPredicted RBP18.18■□□□□ 0.5
DDX11-227ENST00000544652 ESCO1Q5FWF5 840 aa18.18■□□□□ 0.5
DDX11-227ENST00000544652 BRINP3Q76B58 766 aa18.18■□□□□ 0.5
DDX11-227ENST00000544652 PHF8Q9UPP1 1060 aa18.18■□□□□ 0.5
DDX11-227ENST00000544652 ALS2Q96Q42 1657 aa18.18■□□□□ 0.5
DDX11-227ENST00000544652 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
DDX11-227ENST00000544652 USP54Q70EL1 1684 aa18.16■□□□□ 0.5
DDX11-227ENST00000544652 SLC12A5Q9H2X9 1139 aa18.16■□□□□ 0.5
DDX11-227ENST00000544652 COL16A1Q07092 1604 aaPredicted RBP18.16■□□□□ 0.5
DDX11-227ENST00000544652 ANKRD36BQ8N2N9 1353 aa18.16■□□□□ 0.5
DDX11-227ENST00000544652 ANKRD26Q9UPS8 1709 aa18.15■□□□□ 0.5
DDX11-227ENST00000544652 PXDNQ92626 1479 aa18.15■□□□□ 0.5
DDX11-227ENST00000544652 ACEP12821 1306 aa18.15■□□□□ 0.5
DDX11-227ENST00000544652 MARF1Q9Y4F3 1742 aaKnown RBP18.15■□□□□ 0.5
DDX11-227ENST00000544652 SLC4A2P04920 1241 aa18.14■□□□□ 0.49
DDX11-227ENST00000544652 PMFBP1Q8TBY8 1022 aa18.14■□□□□ 0.49
DDX11-227ENST00000544652 A0A1W2PP64 1363 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms