RNA–Protein interactions for RNA: ENST00000544487.5

CCDC189-207, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 2,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-207ENST00000544487 CCDC146Q8IYE0 955 aa27.76■■■□□ 2.03
CCDC189-207ENST00000544487 PTPRMP28827 1452 aa27.75■■■□□ 2.03
CCDC189-207ENST00000544487 YTHDC2Q9H6S0 1430 aaKnown RBP27.74■■■□□ 2.03
CCDC189-207ENST00000544487 ALKQ9UM73 1620 aa27.74■■■□□ 2.03
CCDC189-207ENST00000544487 TNNT2P45379 298 aaPredicted RBP27.74■■■□□ 2.03
CCDC189-207ENST00000544487 USP32Q8NFA0 1604 aa27.74■■■□□ 2.03
CCDC189-207ENST00000544487 CCDC136Q96JN2 1154 aa27.73■■■□□ 2.03
CCDC189-207ENST00000544487 A2ML1A8K2U0 1454 aa27.72■■■□□ 2.03
CCDC189-207ENST00000544487 PRAM1Q96QH2 718 aa27.72■■■□□ 2.03
CCDC189-207ENST00000544487 CGNL1Q0VF96 1302 aa27.72■■■□□ 2.03
CCDC189-207ENST00000544487 ANKRD36BQ8N2N9 1353 aa27.72■■■□□ 2.03
CCDC189-207ENST00000544487 ZNF521Q96K83 1311 aa27.71■■■□□ 2.03
CCDC189-207ENST00000544487 POLR3AO14802 1390 aaPredicted RBP27.7■■■□□ 2.03
CCDC189-207ENST00000544487 SRPK2P78362 688 aaKnown RBP27.7■■■□□ 2.02
CCDC189-207ENST00000544487 MINK1Q8N4C8 1332 aaPredicted RBP27.69■■■□□ 2.02
CCDC189-207ENST00000544487 POGKQ9P215 609 aa27.69■■■□□ 2.02
CCDC189-207ENST00000544487 APAF1O14727 1248 aa27.67■■■□□ 2.02
CCDC189-207ENST00000544487 ESF1Q9H501 851 aaKnown RBP27.66■■■□□ 2.02
CCDC189-207ENST00000544487 GOLGA2Q08379 1002 aa27.65■■■□□ 2.02
CCDC189-207ENST00000544487 EXOC6Q8TAG9 804 aa27.65■■■□□ 2.02
CCDC189-207ENST00000544487 RIMS2Q9UQ26 1411 aa27.65■■■□□ 2.02
CCDC189-207ENST00000544487 DUSP27Q5VZP5 1158 aa27.64■■■□□ 2.02
CCDC189-207ENST00000544487 ZMYM3Q14202 1370 aa27.63■■■□□ 2.01
CCDC189-207ENST00000544487 SHPRHQ149N8 1683 aa27.63■■■□□ 2.01
CCDC189-207ENST00000544487 PLIN1O60240 522 aa27.62■■■□□ 2.01
CCDC189-207ENST00000544487 A0A1W2PP64 1363 aa27.62■■■□□ 2.01
CCDC189-207ENST00000544487 NINLQ9Y2I6 1382 aa27.62■■■□□ 2.01
CCDC189-207ENST00000544487 NSD2O96028 1365 aa27.6■■■□□ 2.01
CCDC189-207ENST00000544487 ATAD2Q6PL18 1390 aa27.6■■■□□ 2.01
CCDC189-207ENST00000544487 MTHFSP49914 203 aa27.59■■■□□ 2.01
CCDC189-207ENST00000544487 SLFN5Q08AF3 891 aa27.58■■■□□ 2.01
CCDC189-207ENST00000544487 SETD1AO15047 1707 aaKnown RBP27.58■■■□□ 2
CCDC189-207ENST00000544487 ABCC11Q96J66 1382 aa27.56■■■□□ 2
CCDC189-207ENST00000544487 CDK19Q9BWU1 502 aa27.55■■■□□ 2
CCDC189-207ENST00000544487 SPINK5Q9NQ38 1064 aaPredicted RBP27.55■■■□□ 2
CCDC189-207ENST00000544487 WAPLQ7Z5K2 1190 aa27.54■■■□□ 2
CCDC189-207ENST00000544487 CD163L1Q9NR16 1453 aa27.53■■■□□ 2
CCDC189-207ENST00000544487 TERF2IPQ9NYB0 399 aa27.53■■■□□ 2
CCDC189-207ENST00000544487 CFAP53Q96M91 514 aa27.53■■■□□ 2
CCDC189-207ENST00000544487 TRMT2AQ8IZ69 625 aaKnown RBP27.52■■■□□ 2
CCDC189-207ENST00000544487 DLC1Q96QB1 1528 aa27.52■■■□□ 2
CCDC189-207ENST00000544487 NRXN3Q9Y4C0 1643 aa27.52■■■□□ 2
CCDC189-207ENST00000544487 GGNBP2Q9H3C7 697 aa27.51■■□□□ 1.99
CCDC189-207ENST00000544487 NGEFQ8N5V2 710 aa27.5■■□□□ 1.99
CCDC189-207ENST00000544487 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.5■■□□□ 1.99
CCDC189-207ENST00000544487 DMRT2Q9Y5R5 561 aa27.5■■□□□ 1.99
CCDC189-207ENST00000544487 TNRQ92752 1358 aa27.49■■□□□ 1.99
CCDC189-207ENST00000544487 CRBNQ96SW2 442 aa27.48■■□□□ 1.99
CCDC189-207ENST00000544487 CABP1Q9NZU7 370 aa27.48■■□□□ 1.99
CCDC189-207ENST00000544487 C20orf194Q5TEA3 1177 aa27.47■■□□□ 1.99
CCDC189-207ENST00000544487 RUNDC1Q96C34 613 aa27.47■■□□□ 1.99
CCDC189-207ENST00000544487 E9PSI1 815 aa27.47■■□□□ 1.99
CCDC189-207ENST00000544487 METP08581 1390 aa27.47■■□□□ 1.99
CCDC189-207ENST00000544487 NKTRP30414 1462 aaKnown RBP27.46■■□□□ 1.99
CCDC189-207ENST00000544487 FYB1O15117 783 aa27.46■■□□□ 1.99
CCDC189-207ENST00000544487 WWC1Q8IX03 1113 aa27.46■■□□□ 1.99
CCDC189-207ENST00000544487 HDGFL2Q7Z4V5 671 aaPredicted RBP27.46■■□□□ 1.99
CCDC189-207ENST00000544487 NEUROD2Q15784 382 aa27.45■■□□□ 1.98
CCDC189-207ENST00000544487 RRP7AQ9Y3A4 280 aaKnown RBP27.44■■□□□ 1.98
CCDC189-207ENST00000544487 IQSEC2Q5JU85 1478 aa27.44■■□□□ 1.98
CCDC189-207ENST00000544487 NLRP1Q9C000 1473 aa27.44■■□□□ 1.98
CCDC189-207ENST00000544487 ANKRD26Q9UPS8 1709 aa27.43■■□□□ 1.98
CCDC189-207ENST00000544487 TCP11L2Q8N4U5 519 aa27.43■■□□□ 1.98
CCDC189-207ENST00000544487 HDGFP51858 240 aaKnown RBP27.41■■□□□ 1.98
CCDC189-207ENST00000544487 UBR1Q8IWV7 1749 aa27.41■■□□□ 1.98
CCDC189-207ENST00000544487 MED14O60244 1454 aa27.41■■□□□ 1.98
CCDC189-207ENST00000544487 U2AF1L5P0DN76 240 aaPredicted RBP27.4■■□□□ 1.98
CCDC189-207ENST00000544487 U2AF1Q01081 240 aaKnown RBP eCLIP27.4■■□□□ 1.98
CCDC189-207ENST00000544487 TXNDC2Q86VQ3 553 aa27.4■■□□□ 1.98
CCDC189-207ENST00000544487 TMEM2Q9UHN6 1383 aa27.38■■□□□ 1.97
CCDC189-207ENST00000544487 KIF20BQ96Q89 1820 aa27.37■■□□□ 1.97
CCDC189-207ENST00000544487 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.37■■□□□ 1.97
CCDC189-207ENST00000544487 FANCIQ9NVI1 1328 aa27.37■■□□□ 1.97
CCDC189-207ENST00000544487 ATP7BP35670 1465 aa27.35■■□□□ 1.97
CCDC189-207ENST00000544487 WASLO00401 505 aaPredicted RBP27.35■■□□□ 1.97
CCDC189-207ENST00000544487 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.35■■□□□ 1.97
CCDC189-207ENST00000544487 PHF23Q9BUL5 403 aaPredicted RBP27.35■■□□□ 1.97
CCDC189-207ENST00000544487 COL3A1P02461 1466 aaPredicted RBP27.34■■□□□ 1.97
CCDC189-207ENST00000544487 BCAR3O75815 825 aa27.34■■□□□ 1.97
CCDC189-207ENST00000544487 KNDC1Q76NI1 1749 aa27.33■■□□□ 1.97
CCDC189-207ENST00000544487 CEBPAP49715 358 aaPredicted RBP27.33■■□□□ 1.97
CCDC189-207ENST00000544487 U2SURPO15042 1029 aaKnown RBP27.32■■□□□ 1.96
CCDC189-207ENST00000544487 TECPR2O15040 1411 aa27.31■■□□□ 1.96
CCDC189-207ENST00000544487 FAM135BQ49AJ0 1406 aa27.31■■□□□ 1.96
CCDC189-207ENST00000544487 PPIP5K1Q6PFW1 1433 aa27.3■■□□□ 1.96
CCDC189-207ENST00000544487 CPS1P31327 1500 aa27.29■■□□□ 1.96
CCDC189-207ENST00000544487 CCDC27Q2M243 656 aa27.29■■□□□ 1.96
CCDC189-207ENST00000544487 WDR63Q8IWG1 891 aa27.29■■□□□ 1.96
CCDC189-207ENST00000544487 ADGRB2O60241 1585 aa27.28■■□□□ 1.96
CCDC189-207ENST00000544487 SIRT1Q96EB6 747 aa27.28■■□□□ 1.96
CCDC189-207ENST00000544487 LTKP29376 864 aa27.27■■□□□ 1.96
CCDC189-207ENST00000544487 ADAMTS13Q76LX8 1427 aa27.27■■□□□ 1.96
CCDC189-207ENST00000544487 CPSF1Q10570 1443 aaKnown RBP27.26■■□□□ 1.95
CCDC189-207ENST00000544487 MSH5O43196 834 aa27.26■■□□□ 1.95
CCDC189-207ENST00000544487 NUDT16Q96DE0 195 aaKnown RBP27.26■■□□□ 1.95
CCDC189-207ENST00000544487 NCKAP5LQ9HCH0 1330 aa27.26■■□□□ 1.95
CCDC189-207ENST00000544487 PLEKHF1Q96S99 279 aa27.25■■□□□ 1.95
CCDC189-207ENST00000544487 PLPPR3Q6T4P5 718 aa27.25■■□□□ 1.95
CCDC189-207ENST00000544487 FBLN1P23142 703 aa27.24■■□□□ 1.95
CCDC189-207ENST00000544487 PNPLA6Q8IY17 1366 aa27.24■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms