RNA–Protein interactions for RNA: ENST00000544336.5

PDCD2-211, Transcript of programmed cell death 2, human

TSL 1 (best)

Gene PDCD2, Length 1,164 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD2-211	ENST00000544336	ADAMTS2	O95450	1211 aa		40.9	■■■■■ 4.14
PDCD2-211	ENST00000544336	TMEM132E	Q6IEE7	984 aa		40.87	■■■■■ 4.13
PDCD2-211	ENST00000544336	WAPL	Q7Z5K2	1190 aa		40.87	■■■■■ 4.13
PDCD2-211	ENST00000544336	ESCO1	Q5FWF5	840 aa		40.86	■■■■■ 4.13
PDCD2-211	ENST00000544336	LRPPRC	P42704	1394 aa	Known RBP	40.85	■■■■■ 4.13
PDCD2-211	ENST00000544336	UPF1	Q92900	1129 aa	Known RBP eCLIP	40.84	■■■■■ 4.13
PDCD2-211	ENST00000544336	KNDC1	Q76NI1	1749 aa		40.84	■■■■■ 4.13
PDCD2-211	ENST00000544336	PIK3C2G	O75747	1445 aa		40.84	■■■■■ 4.13
PDCD2-211	ENST00000544336	CDK12	Q9NYV4	1490 aa	Predicted RBP	40.83	■■■■■ 4.13
PDCD2-211	ENST00000544336	NGLY1	Q96IV0	654 aa		40.83	■■■■■ 4.13
PDCD2-211	ENST00000544336	QTRT2	Q9H974	415 aa	Known RBP	40.83	■■■■■ 4.13
PDCD2-211	ENST00000544336	TECPR2	O15040	1411 aa		40.83	■■■■■ 4.13
PDCD2-211	ENST00000544336	NUTM2F	A1L443	756 aa		40.82	■■■■■ 4.13
PDCD2-211	ENST00000544336	PLEKHH1	Q9ULM0	1364 aa		40.8	■■■■■ 4.12
PDCD2-211	ENST00000544336	ABCC11	Q96J66	1382 aa		40.77	■■■■■ 4.12
PDCD2-211	ENST00000544336	NPHP3	Q7Z494	1330 aa		40.77	■■■■■ 4.12
PDCD2-211	ENST00000544336	COL22A1	Q8NFW1	1626 aa	Predicted RBP	40.76	■■■■■ 4.12
PDCD2-211	ENST00000544336	XPC	Q01831	940 aa	Predicted RBP	40.76	■■■■■ 4.12
PDCD2-211	ENST00000544336	RBM6	P78332	1123 aa	Known RBP	40.75	■■■■■ 4.11
PDCD2-211	ENST00000544336	YTHDC2	Q9H6S0	1430 aa	Known RBP	40.75	■■■■■ 4.11
PDCD2-211	ENST00000544336	RGS12	O14924	1447 aa		40.74	■■■■■ 4.11
PDCD2-211	ENST00000544336	PXDN	Q92626	1479 aa		40.73	■■■■■ 4.11
PDCD2-211	ENST00000544336	FOXO3	O43524	673 aa		40.73	■■■■■ 4.11
PDCD2-211	ENST00000544336	ACIN1	Q9UKV3	1341 aa	Known RBP	40.71	■■■■■ 4.11
PDCD2-211	ENST00000544336	FMN2	Q9NZ56	1722 aa		40.71	■■■■■ 4.11
PDCD2-211	ENST00000544336	USP21	Q9UK80	565 aa		40.68	■■■■■ 4.1
PDCD2-211	ENST00000544336	RAB3GAP2	Q9H2M9	1393 aa		40.68	■■■■■ 4.1
PDCD2-211	ENST00000544336	C14orf93	Q9H972	538 aa	Known RBP	40.66	■■■■■ 4.1
PDCD2-211	ENST00000544336	MYOM2	P54296	1465 aa		40.65	■■■■■ 4.1
PDCD2-211	ENST00000544336	CFAP70	Q5T0N1	1121 aa		40.64	■■■■■ 4.1
PDCD2-211	ENST00000544336	NRXN1	Q9ULB1	1477 aa		40.64	■■■■■ 4.1
PDCD2-211	ENST00000544336	MARF1	Q9Y4F3	1742 aa	Known RBP	40.61	■■■■■ 4.09
PDCD2-211	ENST00000544336	DHX57	Q6P158	1386 aa	Known RBP	40.6	■■■■■ 4.09
PDCD2-211	ENST00000544336	KIF1A	Q12756	1690 aa		40.59	■■■■■ 4.09
PDCD2-211	ENST00000544336	RGPD8	O14715	1765 aa	Predicted RBP	40.59	■■■■■ 4.09
PDCD2-211	ENST00000544336	FNBP4	Q8N3X1	1017 aa	Predicted RBP	40.59	■■■■■ 4.09
PDCD2-211	ENST00000544336	TRPC5	Q9UL62	973 aa	Predicted RBP	40.59	■■■■■ 4.09
PDCD2-211	ENST00000544336	SAFB2	Q14151	953 aa	Known RBP eCLIP	40.56	■■■■■ 4.08
PDCD2-211	ENST00000544336	SIRT1	Q96EB6	747 aa		40.56	■■■■■ 4.08
PDCD2-211	ENST00000544336	ATRN	O75882	1429 aa		40.53	■■■■■ 4.08
PDCD2-211	ENST00000544336	PRAM1	Q96QH2	718 aa		40.52	■■■■■ 4.08
PDCD2-211	ENST00000544336	KRT28	Q7Z3Y7	464 aa		40.49	■■■■■ 4.07
PDCD2-211	ENST00000544336	SPATA31A3	Q5VYP0	1347 aa		40.48	■■■■■ 4.07
PDCD2-211	ENST00000544336	BCL9L	Q86UU0	1499 aa		40.47	■■■■■ 4.07
PDCD2-211	ENST00000544336	PHF8	Q9UPP1	1060 aa		40.47	■■■■■ 4.07
PDCD2-211	ENST00000544336	POGK	Q9P215	609 aa		40.45	■■■■■ 4.07
PDCD2-211	ENST00000544336	DLC1	Q96QB1	1528 aa		40.42	■■■■■ 4.06
PDCD2-211	ENST00000544336	KDM2A	Q9Y2K7	1162 aa		40.42	■■■■■ 4.06
PDCD2-211	ENST00000544336	ATAD2	Q6PL18	1390 aa		40.42	■■■■■ 4.06
PDCD2-211	ENST00000544336	PLEKHG5	O94827	1062 aa		40.41	■■■■■ 4.06
PDCD2-211	ENST00000544336	ADGRB1	O14514	1584 aa		40.4	■■■■■ 4.06
PDCD2-211	ENST00000544336	TRAK1	Q9UPV9	953 aa		40.38	■■■■■ 4.05
PDCD2-211	ENST00000544336	TNS3	Q68CZ2	1445 aa		40.38	■■■■■ 4.05
PDCD2-211	ENST00000544336	USP32	Q8NFA0	1604 aa		40.38	■■■■■ 4.05
PDCD2-211	ENST00000544336	PSME1	Q06323	249 aa		40.37	■■■■■ 4.05
PDCD2-211	ENST00000544336	DCAF11	Q8TEB1	546 aa		40.37	■■■■■ 4.05
PDCD2-211	ENST00000544336	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	40.36	■■■■■ 4.05
PDCD2-211	ENST00000544336	HAP1	P54257	671 aa	Predicted RBP	40.36	■■■■■ 4.05
PDCD2-211	ENST00000544336	LMOD2	Q6P5Q4	547 aa		40.34	■■■■■ 4.05
PDCD2-211	ENST00000544336	GJD4	Q96KN9	370 aa	Predicted RBP	40.34	■■■■■ 4.05
PDCD2-211	ENST00000544336	HIRIP3	Q9BW71	556 aa	Predicted RBP	40.34	■■■■■ 4.05
PDCD2-211	ENST00000544336	ADGRB2	O60241	1585 aa		40.33	■■■■■ 4.05
PDCD2-211	ENST00000544336	PMFBP1	Q8TBY8	1022 aa		40.33	■■■■■ 4.05
PDCD2-211	ENST00000544336	CABLES1	Q8TDN4	633 aa		40.33	■■■■■ 4.05
PDCD2-211	ENST00000544336	SLIT2	O94813	1529 aa		40.32	■■■■■ 4.04
PDCD2-211	ENST00000544336	UNC5CL	Q8IV45	518 aa		40.3	■■■■■ 4.04
PDCD2-211	ENST00000544336	ANKAR	Q7Z5J8	1434 aa		40.29	■■■■■ 4.04
PDCD2-211	ENST00000544336	MINK1	Q8N4C8	1332 aa	Predicted RBP	40.29	■■■■■ 4.04
PDCD2-211	ENST00000544336	ABCA3	Q99758	1704 aa		40.28	■■■■■ 4.04
PDCD2-211	ENST00000544336	SBNO1	A3KN83	1393 aa		40.27	■■■■■ 4.04
PDCD2-211	ENST00000544336	GLI3	P10071	1580 aa		40.26	■■■■■ 4.04
PDCD2-211	ENST00000544336	RALGAPB	Q86X10	1494 aa		40.25	■■■■■ 4.03
PDCD2-211	ENST00000544336	PLCH1	Q4KWH8	1693 aa		40.24	■■■■■ 4.03
PDCD2-211	ENST00000544336	ARHGEF10	O15013	1369 aa		40.23	■■■■■ 4.03
PDCD2-211	ENST00000544336	HRC	P23327	699 aa		40.19	■■■■■ 4.02
PDCD2-211	ENST00000544336	TRPM3	Q9HCF6	1732 aa	Predicted RBP	40.19	■■■■■ 4.02
PDCD2-211	ENST00000544336	PRR36	Q9H6K5	1346 aa		40.18	■■■■■ 4.02
PDCD2-211	ENST00000544336	TULP4	Q9NRJ4	1543 aa		40.18	■■■■■ 4.02
PDCD2-211	ENST00000544336	EP400	Q96L91	3159 aa		40.17	■■■■■ 4.02
PDCD2-211	ENST00000544336	EIF3A	Q14152	1382 aa	Known RBP	40.16	■■■■■ 4.02
PDCD2-211	ENST00000544336	ARHGEF28	Q8N1W1	1705 aa	Known RBP	40.16	■■■■■ 4.02
PDCD2-211	ENST00000544336	NWD2	Q9ULI1	1742 aa		40.16	■■■■■ 4.02
PDCD2-211	ENST00000544336	WASL	O00401	505 aa	Predicted RBP	40.15	■■■■■ 4.02
PDCD2-211	ENST00000544336	STAC3	Q96MF2	364 aa		40.15	■■■■■ 4.02
PDCD2-211	ENST00000544336	BRWD3	Q6RI45	1802 aa		40.14	■■■■■ 4.02
PDCD2-211	ENST00000544336	GPRASP1	Q5JY77	1395 aa		40.13	■■■■■ 4.02
PDCD2-211	ENST00000544336	CCDC9	Q9Y3X0	531 aa	Known RBP	40.13	■■■■■ 4.01
PDCD2-211	ENST00000544336	ALS2	Q96Q42	1657 aa		40.11	■■■■■ 4.01
PDCD2-211	ENST00000544336	VPS72	Q15906	364 aa		40.1	■■■■■ 4.01
PDCD2-211	ENST00000544336	FAM83G	A6ND36	823 aa		40.07	■■■■■ 4.01
PDCD2-211	ENST00000544336	NGDN	Q8NEJ9	315 aa	Known RBP	40.07	■■■■■ 4.01
PDCD2-211	ENST00000544336	CCDC125	Q86Z20	511 aa		40.06	■■■■■ 4
PDCD2-211	ENST00000544336	SEPT12	Q8IYM1	358 aa		40.05	■■■■■ 4
PDCD2-211	ENST00000544336	ITSN1	Q15811	1721 aa		40.04	■■■■■ 4
PDCD2-211	ENST00000544336	PAK3	O75914	559 aa	Predicted RBP	40.03	■■■■■ 4
PDCD2-211	ENST00000544336	NRAP	Q86VF7	1730 aa		40.02	■■■■■ 4
PDCD2-211	ENST00000544336	ATP7B	P35670	1465 aa		40	■■■■□ 3.99
PDCD2-211	ENST00000544336	COL14A1	Q05707	1796 aa	Known RBP	39.98	■■■■□ 3.99
PDCD2-211	ENST00000544336	NUDT16	Q96DE0	195 aa	Known RBP	39.98	■■■■□ 3.99
PDCD2-211	ENST00000544336	BTG4	Q9NY30	223 aa		39.98	■■■■□ 3.99

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms