RNA–Protein interactions for RNA: ENST00000544307.1

PDE3A-203, Transcript of phosphodiesterase 3A, humanhuman

TSL 1 (best)

Gene PDE3A, Length 2,969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE3A-203ENST00000544307 TCP11L2Q8N4U5 519 aa8.17□□□□□ -1.1
PDE3A-203ENST00000544307 SPRYD3Q8NCJ5 442 aa8.17□□□□□ -1.1
PDE3A-203ENST00000544307 PMFBP1Q8TBY8 1022 aa8.17□□□□□ -1.1
PDE3A-203ENST00000544307 IQSEC2Q5JU85 1478 aa8.17□□□□□ -1.1
PDE3A-203ENST00000544307 KDM5AP29375 1690 aaKnown RBP8.17□□□□□ -1.1
PDE3A-203ENST00000544307 AFAP1Q8N556 730 aa8.16□□□□□ -1.1
PDE3A-203ENST00000544307 PANK2Q9BZ23 570 aa8.16□□□□□ -1.1
PDE3A-203ENST00000544307 MCM4P33991 863 aa8.16□□□□□ -1.1
PDE3A-203ENST00000544307 RUNDC1Q96C34 613 aa8.16□□□□□ -1.1
PDE3A-203ENST00000544307 SHPRHQ149N8 1683 aa8.16□□□□□ -1.1
PDE3A-203ENST00000544307 ZMYM3Q14202 1370 aa8.16□□□□□ -1.1
PDE3A-203ENST00000544307 TNNT2P45379 298 aaPredicted RBP8.16□□□□□ -1.1
PDE3A-203ENST00000544307 L1TD1Q5T7N2 865 aaKnown RBP8.16□□□□□ -1.1
PDE3A-203ENST00000544307 EFCAB2Q5VUJ9 269 aa8.15□□□□□ -1.1
PDE3A-203ENST00000544307 WDR63Q8IWG1 891 aa8.15□□□□□ -1.11
PDE3A-203ENST00000544307 ABCC1P33527 1531 aa8.14□□□□□ -1.11
PDE3A-203ENST00000544307 AAMPQ13685 434 aa8.14□□□□□ -1.11
PDE3A-203ENST00000544307 ZNF692Q9BU19 519 aaPredicted RBP8.14□□□□□ -1.11
PDE3A-203ENST00000544307 GZF1Q9H116 711 aaPredicted RBP8.14□□□□□ -1.11
PDE3A-203ENST00000544307 SLC12A5Q9H2X9 1139 aa8.14□□□□□ -1.11
PDE3A-203ENST00000544307 ERCC6L2Q5T890 1561 aa8.14□□□□□ -1.11
PDE3A-203ENST00000544307 UGGT1Q9NYU2 1555 aa8.14□□□□□ -1.11
PDE3A-203ENST00000544307 SPAG9O60271 1321 aaKnown RBP8.14□□□□□ -1.11
PDE3A-203ENST00000544307 MORC1Q86VD1 984 aa8.14□□□□□ -1.11
PDE3A-203ENST00000544307 RWDD1Q9H446 243 aaPredicted RBP8.14□□□□□ -1.11
PDE3A-203ENST00000544307 ABCA6Q8N139 1617 aa8.14□□□□□ -1.11
PDE3A-203ENST00000544307 NSD3Q9BZ95 1437 aa8.14□□□□□ -1.11
PDE3A-203ENST00000544307 KIAA1210Q9ULL0 1709 aa8.13□□□□□ -1.11
PDE3A-203ENST00000544307 MVPQ14764 893 aaKnown RBP8.13□□□□□ -1.11
PDE3A-203ENST00000544307 UPF2Q9HAU5 1272 aaKnown RBP8.13□□□□□ -1.11
PDE3A-203ENST00000544307 KANK1Q14678 1352 aa8.13□□□□□ -1.11
PDE3A-203ENST00000544307 GOLGA6L3A6NEY3 463 aa8.13□□□□□ -1.11
PDE3A-203ENST00000544307 MTHFSP49914 203 aa8.13□□□□□ -1.11
PDE3A-203ENST00000544307 CCDC27Q2M243 656 aa8.13□□□□□ -1.11
PDE3A-203ENST00000544307 C22orf23Q9BZE7 217 aa8.13□□□□□ -1.11
PDE3A-203ENST00000544307 TRAK2O60296 914 aa8.12□□□□□ -1.11
PDE3A-203ENST00000544307 MAP3K4Q9Y6R4 1608 aa8.12□□□□□ -1.11
PDE3A-203ENST00000544307 MYOM2P54296 1465 aa8.12□□□□□ -1.11
PDE3A-203ENST00000544307 SBNO2Q9Y2G9 1366 aa8.12□□□□□ -1.11
PDE3A-203ENST00000544307 VWDEQ8N2E2 1590 aa8.12□□□□□ -1.11
PDE3A-203ENST00000544307 DDIT3P35638 169 aa8.12□□□□□ -1.11
PDE3A-203ENST00000544307 MFAP1P55081 439 aaKnown RBP8.12□□□□□ -1.11
PDE3A-203ENST00000544307 CHMP5Q9NZZ3 219 aa8.12□□□□□ -1.11
PDE3A-203ENST00000544307 ZFYVE16Q7Z3T8 1539 aa8.12□□□□□ -1.11
PDE3A-203ENST00000544307 DEPDC5O75140 1603 aa8.11□□□□□ -1.11
PDE3A-203ENST00000544307 ZNF518AQ6AHZ1 1483 aa8.11□□□□□ -1.11
PDE3A-203ENST00000544307 NRXN1Q9ULB1 1477 aa8.11□□□□□ -1.11
PDE3A-203ENST00000544307 TSR2Q969E8 191 aaKnown RBP8.11□□□□□ -1.11
PDE3A-203ENST00000544307 TET3O43151 1660 aa8.11□□□□□ -1.11
PDE3A-203ENST00000544307 CLCN1P35523 988 aa8.1□□□□□ -1.11
PDE3A-203ENST00000544307 ZKSCAN2Q63HK3 967 aa8.1□□□□□ -1.11
PDE3A-203ENST00000544307 DZIP1LQ8IYY4 767 aaKnown RBP8.1□□□□□ -1.11
PDE3A-203ENST00000544307 NEURL4Q96JN8 1562 aa8.1□□□□□ -1.11
PDE3A-203ENST00000544307 KIF3BO15066 747 aa8.1□□□□□ -1.11
PDE3A-203ENST00000544307 TRAK1Q9UPV9 953 aa8.1□□□□□ -1.11
PDE3A-203ENST00000544307 SHROOM2Q13796 1616 aa8.1□□□□□ -1.11
PDE3A-203ENST00000544307 TRIM27P14373 513 aa8.1□□□□□ -1.11
PDE3A-203ENST00000544307 HDAC1Q13547 482 aaPredicted RBP8.1□□□□□ -1.11
PDE3A-203ENST00000544307 MYO3AQ8NEV4 1616 aa8.09□□□□□ -1.11
PDE3A-203ENST00000544307 NCOA3Q9Y6Q9 1424 aa8.09□□□□□ -1.11
PDE3A-203ENST00000544307 EXOSC9Q06265 439 aaKnown RBP8.09□□□□□ -1.11
PDE3A-203ENST00000544307 ERBB4Q15303 1308 aa8.09□□□□□ -1.11
PDE3A-203ENST00000544307 SMC5Q8IY18 1101 aa8.09□□□□□ -1.11
PDE3A-203ENST00000544307 SSH1Q8WYL5 1049 aa8.09□□□□□ -1.11
PDE3A-203ENST00000544307 MYH16Q9H6N6 1097 aa8.09□□□□□ -1.11
PDE3A-203ENST00000544307 MROH1Q8NDA8 1641 aa8.08□□□□□ -1.12
PDE3A-203ENST00000544307 PLCB2Q00722 1185 aa8.08□□□□□ -1.12
PDE3A-203ENST00000544307 GAS2L3Q86XJ1 694 aa8.08□□□□□ -1.12
PDE3A-203ENST00000544307 NOS1P29475 1434 aa8.08□□□□□ -1.12
PDE3A-203ENST00000544307 CD109Q6YHK3 1445 aa8.08□□□□□ -1.12
PDE3A-203ENST00000544307 TMEM132EQ6IEE7 984 aa8.08□□□□□ -1.12
PDE3A-203ENST00000544307 TRIM35Q9UPQ4 493 aa8.08□□□□□ -1.12
PDE3A-203ENST00000544307 U2AF1L5P0DN76 240 aaPredicted RBP8.07□□□□□ -1.12
PDE3A-203ENST00000544307 MRE11P49959 708 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 U2AF1Q01081 240 aaKnown RBP eCLIP8.07□□□□□ -1.12
PDE3A-203ENST00000544307 FTSJ3Q8IY81 847 aaKnown RBP8.07□□□□□ -1.12
PDE3A-203ENST00000544307 PLEKHF1Q96S99 279 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 GRPEL1Q9HAV7 217 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 MROH2AA6NES4 1674 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 C14orf37Q86TY3 774 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 KIF2CQ99661 725 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 PNNQ9H307 717 aaKnown RBP8.07□□□□□ -1.12
PDE3A-203ENST00000544307 C14orf93Q9H972 538 aaKnown RBP8.07□□□□□ -1.12
PDE3A-203ENST00000544307 SMC4Q9NTJ3 1288 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 IFT172Q9UG01 1749 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 ZCCHC11Q5TAX3 1644 aaKnown RBP8.07□□□□□ -1.12
PDE3A-203ENST00000544307 ADGRB2O60241 1585 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 RBM25P49756 843 aaKnown RBP8.07□□□□□ -1.12
PDE3A-203ENST00000544307 TMEM57Q8N5G2 664 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 ZBTB40Q9NUA8 1239 aa8.07□□□□□ -1.12
PDE3A-203ENST00000544307 NOB1Q9ULX3 412 aaKnown RBP8.07□□□□□ -1.12
PDE3A-203ENST00000544307 ATF7IPQ6VMQ6 1270 aa8.06□□□□□ -1.12
PDE3A-203ENST00000544307 ITPRIPQ8IWB1 547 aa8.06□□□□□ -1.12
PDE3A-203ENST00000544307 TNPO1Q92973 898 aaKnown RBP8.06□□□□□ -1.12
PDE3A-203ENST00000544307 NAP1L5Q96NT1 182 aaPredicted RBP8.06□□□□□ -1.12
PDE3A-203ENST00000544307 ADGRB1O14514 1584 aa8.06□□□□□ -1.12
PDE3A-203ENST00000544307 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
PDE3A-203ENST00000544307 SNX21Q969T3 373 aa8.06□□□□□ -1.12
PDE3A-203ENST00000544307 CFAP53Q96M91 514 aa8.06□□□□□ -1.12
PDE3A-203ENST00000544307 ATP7AQ04656 1500 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms