RNA–Protein interactions for RNA: ENST00000544276.1

LMO3-230, Transcript of LIM domain only 3, humanhuman

TSL 3

Gene LMO3, Length 460 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-230ENST00000544276 SIRT1Q96EB6 747 aa15.61■□□□□ 0.09
LMO3-230ENST00000544276 CDK12Q9NYV4 1490 aaPredicted RBP15.6■□□□□ 0.09
LMO3-230ENST00000544276 AFF2P51816 1311 aa15.6■□□□□ 0.09
LMO3-230ENST00000544276 CDC42BPGQ6DT37 1551 aa15.59■□□□□ 0.09
LMO3-230ENST00000544276 C14orf93Q9H972 538 aaKnown RBP15.58■□□□□ 0.08
LMO3-230ENST00000544276 NPHP3Q7Z494 1330 aa15.58■□□□□ 0.08
LMO3-230ENST00000544276 NRXN1Q9ULB1 1477 aa15.57■□□□□ 0.08
LMO3-230ENST00000544276 ESCO1Q5FWF5 840 aa15.56■□□□□ 0.08
LMO3-230ENST00000544276 TMEM132EQ6IEE7 984 aa15.56■□□□□ 0.08
LMO3-230ENST00000544276 WAPLQ7Z5K2 1190 aa15.56■□□□□ 0.08
LMO3-230ENST00000544276 C8orf37Q96NL8 207 aa15.56■□□□□ 0.08
LMO3-230ENST00000544276 STK26Q9P289 416 aa15.56■□□□□ 0.08
LMO3-230ENST00000544276 YTHDC2Q9H6S0 1430 aaKnown RBP15.56■□□□□ 0.08
LMO3-230ENST00000544276 MYOM2P54296 1465 aa15.55■□□□□ 0.08
LMO3-230ENST00000544276 RAB3GAP2Q9H2M9 1393 aa15.55■□□□□ 0.08
LMO3-230ENST00000544276 HRCP23327 699 aa15.54■□□□□ 0.08
LMO3-230ENST00000544276 RBM6P78332 1123 aaKnown RBP15.54■□□□□ 0.08
LMO3-230ENST00000544276 QTRT2Q9H974 415 aaKnown RBP15.54■□□□□ 0.08
LMO3-230ENST00000544276 FNBP4Q8N3X1 1017 aaPredicted RBP15.53■□□□□ 0.08
LMO3-230ENST00000544276 UPF1Q92900 1129 aaKnown RBP eCLIP15.53■□□□□ 0.08
LMO3-230ENST00000544276 NGLY1Q96IV0 654 aa15.53■□□□□ 0.08
LMO3-230ENST00000544276 IFT172Q9UG01 1749 aa15.53■□□□□ 0.08
LMO3-230ENST00000544276 PXDNQ92626 1479 aa15.52■□□□□ 0.08
LMO3-230ENST00000544276 DHX57Q6P158 1386 aaKnown RBP15.52■□□□□ 0.08
LMO3-230ENST00000544276 PLEKHH1Q9ULM0 1364 aa15.52■□□□□ 0.08
LMO3-230ENST00000544276 FOXO3O43524 673 aa15.52■□□□□ 0.08
LMO3-230ENST00000544276 ADAMTS2O95450 1211 aa15.52■□□□□ 0.08
LMO3-230ENST00000544276 STAC3Q96MF2 364 aa15.51■□□□□ 0.07
LMO3-230ENST00000544276 CFAP70Q5T0N1 1121 aa15.5■□□□□ 0.07
LMO3-230ENST00000544276 KNDC1Q76NI1 1749 aa15.5■□□□□ 0.07
LMO3-230ENST00000544276 USP21Q9UK80 565 aa15.49■□□□□ 0.07
LMO3-230ENST00000544276 COL22A1Q8NFW1 1626 aaPredicted RBP15.49■□□□□ 0.07
LMO3-230ENST00000544276 TRPC5Q9UL62 973 aaPredicted RBP15.48■□□□□ 0.07
LMO3-230ENST00000544276 RGS12O14924 1447 aa15.47■□□□□ 0.07
LMO3-230ENST00000544276 SPATA31A3Q5VYP0 1347 aa15.46■□□□□ 0.07
LMO3-230ENST00000544276 NUTM2FA1L443 756 aa15.46■□□□□ 0.07
LMO3-230ENST00000544276 DLC1Q96QB1 1528 aa15.46■□□□□ 0.07
LMO3-230ENST00000544276 XPCQ01831 940 aaPredicted RBP15.45■□□□□ 0.06
LMO3-230ENST00000544276 PRAM1Q96QH2 718 aa15.45■□□□□ 0.06
LMO3-230ENST00000544276 ATRNO75882 1429 aa15.44■□□□□ 0.06
LMO3-230ENST00000544276 PHF8Q9UPP1 1060 aa15.44■□□□□ 0.06
LMO3-230ENST00000544276 PSME1Q06323 249 aa15.43■□□□□ 0.06
LMO3-230ENST00000544276 KRT28Q7Z3Y7 464 aa15.43■□□□□ 0.06
LMO3-230ENST00000544276 BCL9LQ86UU0 1499 aa15.43■□□□□ 0.06
LMO3-230ENST00000544276 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
LMO3-230ENST00000544276 ANKARQ7Z5J8 1434 aa15.43■□□□□ 0.06
LMO3-230ENST00000544276 KIF1AQ12756 1690 aa15.42■□□□□ 0.06
LMO3-230ENST00000544276 ADGRB1O14514 1584 aa15.42■□□□□ 0.06
LMO3-230ENST00000544276 SBNO1A3KN83 1393 aa15.42■□□□□ 0.06
LMO3-230ENST00000544276 POGKQ9P215 609 aa15.42■□□□□ 0.06
LMO3-230ENST00000544276 DCAF11Q8TEB1 546 aa15.41■□□□□ 0.06
LMO3-230ENST00000544276 TNS3Q68CZ2 1445 aa15.4■□□□□ 0.06
LMO3-230ENST00000544276 EIF3AQ14152 1382 aaKnown RBP15.39■□□□□ 0.05
LMO3-230ENST00000544276 ATAD2Q6PL18 1390 aa15.39■□□□□ 0.05
LMO3-230ENST00000544276 SAFB2Q14151 953 aaKnown RBP eCLIP15.39■□□□□ 0.05
LMO3-230ENST00000544276 GJD4Q96KN9 370 aaPredicted RBP15.39■□□□□ 0.05
LMO3-230ENST00000544276 SLIT2O94813 1529 aa15.38■□□□□ 0.05
LMO3-230ENST00000544276 ARHGEF10O15013 1369 aa15.38■□□□□ 0.05
LMO3-230ENST00000544276 ADGRB2O60241 1585 aa15.38■□□□□ 0.05
LMO3-230ENST00000544276 UNC5CLQ8IV45 518 aa15.38■□□□□ 0.05
LMO3-230ENST00000544276 TRAK1Q9UPV9 953 aa15.38■□□□□ 0.05
LMO3-230ENST00000544276 KDM2AQ9Y2K7 1162 aa15.37■□□□□ 0.05
LMO3-230ENST00000544276 WASLO00401 505 aaPredicted RBP15.35■□□□□ 0.05
LMO3-230ENST00000544276 CCDC125Q86Z20 511 aa15.34■□□□□ 0.05
LMO3-230ENST00000544276 PMFBP1Q8TBY8 1022 aa15.33■□□□□ 0.04
LMO3-230ENST00000544276 HIRIP3Q9BW71 556 aaPredicted RBP15.33■□□□□ 0.04
LMO3-230ENST00000544276 TULP4Q9NRJ4 1543 aa15.33■□□□□ 0.04
LMO3-230ENST00000544276 USP32Q8NFA0 1604 aa15.32■□□□□ 0.04
LMO3-230ENST00000544276 HAP1P54257 671 aaPredicted RBP15.32■□□□□ 0.04
LMO3-230ENST00000544276 VPS72Q15906 364 aa15.32■□□□□ 0.04
LMO3-230ENST00000544276 MINK1Q8N4C8 1332 aaPredicted RBP15.32■□□□□ 0.04
LMO3-230ENST00000544276 PRR36Q9H6K5 1346 aa15.32■□□□□ 0.04
LMO3-230ENST00000544276 GPRASP1Q5JY77 1395 aa15.32■□□□□ 0.04
LMO3-230ENST00000544276 CABLES1Q8TDN4 633 aa15.31■□□□□ 0.04
LMO3-230ENST00000544276 RALGAPBQ86X10 1494 aa15.31■□□□□ 0.04
LMO3-230ENST00000544276 ONECUT3O60422 494 aaPredicted RBP15.3■□□□□ 0.04
LMO3-230ENST00000544276 LMOD2Q6P5Q4 547 aa15.3■□□□□ 0.04
LMO3-230ENST00000544276 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.3■□□□□ 0.04
LMO3-230ENST00000544276 MARF1Q9Y4F3 1742 aaKnown RBP15.3■□□□□ 0.04
LMO3-230ENST00000544276 FAM83GA6ND36 823 aa15.28■□□□□ 0.04
LMO3-230ENST00000544276 NGDNQ8NEJ9 315 aaKnown RBP15.27■□□□□ 0.04
LMO3-230ENST00000544276 NUDT16Q96DE0 195 aaKnown RBP15.27■□□□□ 0.04
LMO3-230ENST00000544276 GLI3P10071 1580 aa15.27■□□□□ 0.03
LMO3-230ENST00000544276 EP400Q96L91 3159 aa15.26■□□□□ 0.03
LMO3-230ENST00000544276 ATP7BP35670 1465 aa15.26■□□□□ 0.03
LMO3-230ENST00000544276 SEPT12Q8IYM1 358 aa15.25■□□□□ 0.03
LMO3-230ENST00000544276 RGPD8O14715 1765 aaPredicted RBP15.25■□□□□ 0.03
LMO3-230ENST00000544276 TRPM3Q9HCF6 1732 aaPredicted RBP15.24■□□□□ 0.03
LMO3-230ENST00000544276 CDK19Q9BWU1 502 aa15.24■□□□□ 0.03
LMO3-230ENST00000544276 CCDC61Q9Y6R9 512 aa15.24■□□□□ 0.03
LMO3-230ENST00000544276 BLMP54132 1417 aaPredicted RBP15.24■□□□□ 0.03
LMO3-230ENST00000544276 POLR3AO14802 1390 aaPredicted RBP15.24■□□□□ 0.03
LMO3-230ENST00000544276 PLEKHG3A1L390 1219 aa15.23■□□□□ 0.03
LMO3-230ENST00000544276 NWD2Q9ULI1 1742 aa15.23■□□□□ 0.03
LMO3-230ENST00000544276 BTG4Q9NY30 223 aa15.22■□□□□ 0.03
LMO3-230ENST00000544276 ALS2Q96Q42 1657 aa15.22■□□□□ 0.03
LMO3-230ENST00000544276 SRCAPQ6ZRS2 3230 aa15.21■□□□□ 0.03
LMO3-230ENST00000544276 ARHGEF28Q8N1W1 1705 aaKnown RBP15.21■□□□□ 0.03
LMO3-230ENST00000544276 KIAA1210Q9ULL0 1709 aa15.21■□□□□ 0.03
LMO3-230ENST00000544276 PAK3O75914 559 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms