RNA–Protein interactions for RNA: ENST00000544254.1

PSMD9-210, Transcript of proteasome 26S subunit, non-ATPase 9, humanhuman

TSL 2

Gene PSMD9, Length 1,481 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD9-210ENST00000544254 FAM135BQ49AJ0 1406 aa17.39■□□□□ 0.38
PSMD9-210ENST00000544254 ANKRD36BQ8N2N9 1353 aa17.39■□□□□ 0.37
PSMD9-210ENST00000544254 EID1Q9Y6B2 187 aa17.39■□□□□ 0.37
PSMD9-210ENST00000544254 NSD2O96028 1365 aa17.38■□□□□ 0.37
PSMD9-210ENST00000544254 THEMISQ8N1K5 641 aaPredicted RBP17.37■□□□□ 0.37
PSMD9-210ENST00000544254 CPS1P31327 1500 aa17.37■□□□□ 0.37
PSMD9-210ENST00000544254 PPP2R1AP30153 589 aa17.36■□□□□ 0.37
PSMD9-210ENST00000544254 CEBPAP49715 358 aaPredicted RBP17.36■□□□□ 0.37
PSMD9-210ENST00000544254 CARD14Q9BXL6 1004 aa17.36■□□□□ 0.37
PSMD9-210ENST00000544254 NSD3Q9BZ95 1437 aa17.36■□□□□ 0.37
PSMD9-210ENST00000544254 DIP2AQ14689 1571 aa17.35■□□□□ 0.37
PSMD9-210ENST00000544254 SRPK2P78362 688 aaKnown RBP17.35■□□□□ 0.37
PSMD9-210ENST00000544254 CGNL1Q0VF96 1302 aa17.34■□□□□ 0.37
PSMD9-210ENST00000544254 SLC12A5Q9H2X9 1139 aa17.34■□□□□ 0.37
PSMD9-210ENST00000544254 ADAMTSL3P82987 1691 aa17.34■□□□□ 0.37
PSMD9-210ENST00000544254 RIMS1Q86UR5 1692 aaKnown RBP17.34■□□□□ 0.37
PSMD9-210ENST00000544254 METP08581 1390 aa17.34■□□□□ 0.37
PSMD9-210ENST00000544254 ADAMTS13Q76LX8 1427 aa17.33■□□□□ 0.37
PSMD9-210ENST00000544254 SAFB2Q14151 953 aaKnown RBP eCLIP17.33■□□□□ 0.37
PSMD9-210ENST00000544254 TXNDC2Q86VQ3 553 aa17.33■□□□□ 0.37
PSMD9-210ENST00000544254 BCANQ96GW7 911 aa17.33■□□□□ 0.37
PSMD9-210ENST00000544254 TERF2IPQ9NYB0 399 aa17.33■□□□□ 0.37
PSMD9-210ENST00000544254 MED14O60244 1454 aa17.33■□□□□ 0.36
PSMD9-210ENST00000544254 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.36
PSMD9-210ENST00000544254 CABP2Q9NPB3 220 aa17.32■□□□□ 0.36
PSMD9-210ENST00000544254 NEFLP07196 543 aa17.31■□□□□ 0.36
PSMD9-210ENST00000544254 CEP170BQ9Y4F5 1589 aaPredicted RBP17.31■□□□□ 0.36
PSMD9-210ENST00000544254 BLMP54132 1417 aaPredicted RBP17.31■□□□□ 0.36
PSMD9-210ENST00000544254 ZNF142P52746 1687 aaPredicted RBP17.3■□□□□ 0.36
PSMD9-210ENST00000544254 CDK19Q9BWU1 502 aa17.3■□□□□ 0.36
PSMD9-210ENST00000544254 SENP3Q9H4L4 574 aaPredicted RBP17.3■□□□□ 0.36
PSMD9-210ENST00000544254 LTKP29376 864 aa17.29■□□□□ 0.36
PSMD9-210ENST00000544254 HDGFL2Q7Z4V5 671 aaPredicted RBP17.29■□□□□ 0.36
PSMD9-210ENST00000544254 TBX22Q9Y458 520 aa17.29■□□□□ 0.36
PSMD9-210ENST00000544254 ATP7BP35670 1465 aa17.28■□□□□ 0.36
PSMD9-210ENST00000544254 WDR43Q15061 677 aaKnown RBP eCLIP17.28■□□□□ 0.36
PSMD9-210ENST00000544254 MORC1Q86VD1 984 aa17.28■□□□□ 0.36
PSMD9-210ENST00000544254 SMG6Q86US8 1419 aaKnown RBP17.27■□□□□ 0.36
PSMD9-210ENST00000544254 ADGRB2O60241 1585 aa17.27■□□□□ 0.36
PSMD9-210ENST00000544254 A0A1W2PP64 1363 aa17.27■□□□□ 0.35
PSMD9-210ENST00000544254 POLR3AO14802 1390 aaPredicted RBP17.27■□□□□ 0.35
PSMD9-210ENST00000544254 PLEKHH1Q9ULM0 1364 aa17.26■□□□□ 0.35
PSMD9-210ENST00000544254 WASLO00401 505 aaPredicted RBP17.25■□□□□ 0.35
PSMD9-210ENST00000544254 PDE3BQ13370 1112 aa17.25■□□□□ 0.35
PSMD9-210ENST00000544254 WAPLQ7Z5K2 1190 aa17.25■□□□□ 0.35
PSMD9-210ENST00000544254 PIK3R4Q99570 1358 aa17.25■□□□□ 0.35
PSMD9-210ENST00000544254 PTCH1Q13635 1447 aa17.24■□□□□ 0.35
PSMD9-210ENST00000544254 ANKRD26Q9UPS8 1709 aa17.23■□□□□ 0.35
PSMD9-210ENST00000544254 CD163L1Q9NR16 1453 aa17.23■□□□□ 0.35
PSMD9-210ENST00000544254 SUPT16HQ9Y5B9 1047 aaKnown RBP17.23■□□□□ 0.35
PSMD9-210ENST00000544254 PLPPR3Q6T4P5 718 aa17.22■□□□□ 0.35
PSMD9-210ENST00000544254 NUDCQ9Y266 331 aa17.22■□□□□ 0.35
PSMD9-210ENST00000544254 ROBO2Q9HCK4 1378 aa17.21■□□□□ 0.35
PSMD9-210ENST00000544254 SETD1BQ9UPS6 1966 aaKnown RBP17.2■□□□□ 0.34
PSMD9-210ENST00000544254 NGEFQ8N5V2 710 aa17.2■□□□□ 0.34
PSMD9-210ENST00000544254 CFAP53Q96M91 514 aa17.2■□□□□ 0.34
PSMD9-210ENST00000544254 ERICH6BQ5W0A0 696 aa17.19■□□□□ 0.34
PSMD9-210ENST00000544254 CABP1Q9NZU7 370 aa17.19■□□□□ 0.34
PSMD9-210ENST00000544254 ADAMTS8Q9UP79 889 aa17.19■□□□□ 0.34
PSMD9-210ENST00000544254 PPIP5K1Q6PFW1 1433 aa17.19■□□□□ 0.34
PSMD9-210ENST00000544254 ANKLE2Q86XL3 938 aa17.18■□□□□ 0.34
PSMD9-210ENST00000544254 KIF20BQ96Q89 1820 aa17.18■□□□□ 0.34
PSMD9-210ENST00000544254 XRN1Q8IZH2 1706 aaKnown RBP17.18■□□□□ 0.34
PSMD9-210ENST00000544254 CDC42BPGQ6DT37 1551 aa17.18■□□□□ 0.34
PSMD9-210ENST00000544254 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
PSMD9-210ENST00000544254 PTPRUQ92729 1446 aa17.18■□□□□ 0.34
PSMD9-210ENST00000544254 CCDC61Q9Y6R9 512 aa17.18■□□□□ 0.34
PSMD9-210ENST00000544254 EDC4Q6P2E9 1401 aaKnown RBP17.17■□□□□ 0.34
PSMD9-210ENST00000544254 FKBP8Q14318 412 aa17.17■□□□□ 0.34
PSMD9-210ENST00000544254 NUDT16Q96DE0 195 aaKnown RBP17.17■□□□□ 0.34
PSMD9-210ENST00000544254 SLC26A8Q96RN1 970 aa17.17■□□□□ 0.34
PSMD9-210ENST00000544254 AMOTL2Q9Y2J4 779 aa17.17■□□□□ 0.34
PSMD9-210ENST00000544254 ZNF692Q9BU19 519 aaPredicted RBP17.16■□□□□ 0.34
PSMD9-210ENST00000544254 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.15■□□□□ 0.34
PSMD9-210ENST00000544254 FYB1O15117 783 aa17.14■□□□□ 0.33
PSMD9-210ENST00000544254 ITSN1Q15811 1721 aa17.14■□□□□ 0.33
PSMD9-210ENST00000544254 TOPAZ1Q8N9V7 1692 aa17.13■□□□□ 0.33
PSMD9-210ENST00000544254 PELP1Q8IZL8 1130 aaKnown RBP17.13■□□□□ 0.33
PSMD9-210ENST00000544254 MON2Q7Z3U7 1717 aa17.13■□□□□ 0.33
PSMD9-210ENST00000544254 AKAP12Q02952 1782 aa17.12■□□□□ 0.33
PSMD9-210ENST00000544254 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
PSMD9-210ENST00000544254 MTHFSP49914 203 aa17.12■□□□□ 0.33
PSMD9-210ENST00000544254 PLEKHG3A1L390 1219 aa17.1■□□□□ 0.33
PSMD9-210ENST00000544254 TNNT2P45379 298 aaPredicted RBP17.1■□□□□ 0.33
PSMD9-210ENST00000544254 GGNBP2Q9H3C7 697 aa17.1■□□□□ 0.33
PSMD9-210ENST00000544254 NCBP3Q53F19 620 aaKnown RBP17.09■□□□□ 0.33
PSMD9-210ENST00000544254 ANKARQ7Z5J8 1434 aa17.08■□□□□ 0.33
PSMD9-210ENST00000544254 CHD2O14647 1828 aaKnown RBP17.07■□□□□ 0.32
PSMD9-210ENST00000544254 NPHP4O75161 1426 aaPredicted RBP17.07■□□□□ 0.32
PSMD9-210ENST00000544254 RNF123Q5XPI4 1314 aa17.07■□□□□ 0.32
PSMD9-210ENST00000544254 PRR36Q9H6K5 1346 aa17.07■□□□□ 0.32
PSMD9-210ENST00000544254 RUNDC1Q96C34 613 aa17.05■□□□□ 0.32
PSMD9-210ENST00000544254 ZNF521Q96K83 1311 aa17.05■□□□□ 0.32
PSMD9-210ENST00000544254 AATKQ6ZMQ8 1374 aa17.05■□□□□ 0.32
PSMD9-210ENST00000544254 PNPLA6Q8IY17 1366 aa17.05■□□□□ 0.32
PSMD9-210ENST00000544254 NRKQ7Z2Y5 1582 aa17.05■□□□□ 0.32
PSMD9-210ENST00000544254 COL3A1P02461 1466 aaPredicted RBP17.04■□□□□ 0.32
PSMD9-210ENST00000544254 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.04■□□□□ 0.32
PSMD9-210ENST00000544254 PNNQ9H307 717 aaKnown RBP17.04■□□□□ 0.32
PSMD9-210ENST00000544254 SALL2Q9Y467 1007 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms