RNA–Protein interactions for RNA: ENST00000543728.1

HPS5-208, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, human

TSL 5

Gene HPS5, Length 320 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HPS5-208	ENST00000543728	CABLES1	Q8TDN4	633 aa		4.11	□□□□□ -1.75
HPS5-208	ENST00000543728	GJD4	Q96KN9	370 aa	Predicted RBP	4.11	□□□□□ -1.75
HPS5-208	ENST00000543728	KCNH8	Q96L42	1107 aa		4.11	□□□□□ -1.75
HPS5-208	ENST00000543728	KIAA1468	Q9P260	1216 aa		4.11	□□□□□ -1.75
HPS5-208	ENST00000543728	SOWAHB	A6NEL2	793 aa		4.1	□□□□□ -1.75
HPS5-208	ENST00000543728	DDX11L8	A8MPP1	907 aa		4.1	□□□□□ -1.75
HPS5-208	ENST00000543728	PPP1R3G	B7ZBB8	358 aa		4.1	□□□□□ -1.75
HPS5-208	ENST00000543728	SOCS7	O14512	581 aa		4.1	□□□□□ -1.75
HPS5-208	ENST00000543728	USP17L8	P0C7I0	530 aa		4.1	□□□□□ -1.75
HPS5-208	ENST00000543728	DIXDC1	Q155Q3	683 aa		4.1	□□□□□ -1.75
HPS5-208	ENST00000543728	GLMN	Q92990	594 aa		4.1	□□□□□ -1.75
HPS5-208	ENST00000543728	RABGEF1	Q9UJ41	708 aa		4.1	□□□□□ -1.75
HPS5-208	ENST00000543728	AP1G2	O75843	785 aa		4.09	□□□□□ -1.75
HPS5-208	ENST00000543728	NUDT18	Q6ZVK8	323 aa		4.09	□□□□□ -1.75
HPS5-208	ENST00000543728	RGS22	Q8NE09	1264 aa		4.09	□□□□□ -1.75
HPS5-208	ENST00000543728	ZFR	Q96KR1	1074 aa	Known RBP	4.09	□□□□□ -1.75
HPS5-208	ENST00000543728	CALR3	Q96L12	384 aa	Known RBP	4.09	□□□□□ -1.75
HPS5-208	ENST00000543728	NBPF3	Q9H094	633 aa		4.09	□□□□□ -1.75
HPS5-208	ENST00000543728	TMEM134	Q9H6X4	195 aa		4.09	□□□□□ -1.75
HPS5-208	ENST00000543728	HMX1	Q9NP08	348 aa	Predicted RBP	4.09	□□□□□ -1.75
HPS5-208	ENST00000543728	GJA5	P36382	358 aa		4.08	□□□□□ -1.76
HPS5-208	ENST00000543728	SRPK2	P78362	688 aa	Known RBP	4.08	□□□□□ -1.76
HPS5-208	ENST00000543728	GUCA2A	Q02747	115 aa		4.08	□□□□□ -1.76
HPS5-208	ENST00000543728	NUTM1	Q86Y26	1132 aa		4.08	□□□□□ -1.76
HPS5-208	ENST00000543728	ANKK1	Q8NFD2	765 aa		4.08	□□□□□ -1.76
HPS5-208	ENST00000543728	HLA-C	Q95604	372 aa		4.08	□□□□□ -1.76
HPS5-208	ENST00000543728	TRIM34	Q9BYJ4	488 aa		4.08	□□□□□ -1.76
HPS5-208	ENST00000543728	PCDHGC3	Q9UN70	934 aa		4.08	□□□□□ -1.76
HPS5-208	ENST00000543728	CARNS1	A5YM72	827 aa		4.07	□□□□□ -1.76
HPS5-208	ENST00000543728	SMAP	O00193	183 aa		4.07	□□□□□ -1.76
HPS5-208	ENST00000543728	PPP1R15A	O75807	674 aa	Predicted RBP	4.07	□□□□□ -1.76
HPS5-208	ENST00000543728	DNAJB2	P25686	324 aa		4.07	□□□□□ -1.76
HPS5-208	ENST00000543728	CFAP70	Q5T0N1	1121 aa		4.07	□□□□□ -1.76
HPS5-208	ENST00000543728	TATDN2	Q93075	761 aa		4.07	□□□□□ -1.76
HPS5-208	ENST00000543728	GZF1	Q9H116	711 aa	Predicted RBP	4.07	□□□□□ -1.76
HPS5-208	ENST00000543728	PNMA3	Q9UL41	463 aa		4.07	□□□□□ -1.76
HPS5-208	ENST00000543728	TRBV21OR9-2	A0A075B6F4	123 aa	Predicted RBP	4.06	□□□□□ -1.76
HPS5-208	ENST00000543728	TRIM6-TRIM34	B2RNG4	842 aa		4.06	□□□□□ -1.76
HPS5-208	ENST00000543728	HOXA2	O43364	376 aa		4.06	□□□□□ -1.76
HPS5-208	ENST00000543728	CTDSPL2	Q05D32	466 aa		4.06	□□□□□ -1.76
HPS5-208	ENST00000543728	HDGFL1	Q5TGJ6	251 aa		4.06	□□□□□ -1.76
HPS5-208	ENST00000543728	SULF1	Q8IWU6	871 aa		4.06	□□□□□ -1.76
HPS5-208	ENST00000543728	EPS8L1	Q8TE68	723 aa		4.06	□□□□□ -1.76
HPS5-208	ENST00000543728	MTMR7	Q9Y216	660 aa		4.06	□□□□□ -1.76
HPS5-208	ENST00000543728	NUTM2B	A6NNL0	878 aa	Predicted RBP	4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	NUTM2E	B1AL46	878 aa	Predicted RBP	4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	NBPF26	B4DH59	902 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	KDM4A	O75164	1064 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	SLC10A3	P09131	477 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	MFAP1	P55081	439 aa	Known RBP	4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	KCNC4	Q03721	635 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	TJAP1	Q5JTD0	557 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	NUTM2D	Q5VT03	806 aa	Predicted RBP	4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	PRPF38B	Q5VTL8	546 aa	Known RBP	4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	NUTM2A	Q8IVF1	878 aa	Predicted RBP	4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	LRRN4	Q8WUT4	740 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	ZNF428	Q96B54	188 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	UCN2	Q96RP3	112 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	HPS5	Q9UPZ3	1129 aa		4.05	□□□□□ -1.76
HPS5-208	ENST00000543728	CFAP99	D6REC4	459 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	GFRA3	O60609	400 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	FDX1	P10109	184 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	RFX1	P22670	979 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	GCGR	P47871	477 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	VAC14	Q08AM6	782 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	TMCO4	Q5TGY1	634 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	FOXD4L5	Q5VV16	416 aa	Predicted RBP	4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	LAPTM4B	Q86VI4	370 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	RDH13	Q8NBN7	331 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	ZNF516	Q92618	1163 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	PBXIP1	Q96AQ6	731 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	ZBTB3	Q9H5J0	574 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	NDUFB9	Q9Y6M9	179 aa		4.04	□□□□□ -1.76
HPS5-208	ENST00000543728	TRAF7	Q6Q0C0	670 aa		4.03	□□□□□ -1.76
HPS5-208	ENST00000543728	WWC1	Q8IX03	1113 aa		4.03	□□□□□ -1.76
HPS5-208	ENST00000543728	NKX2-3	Q8TAU0	364 aa		4.03	□□□□□ -1.76
HPS5-208	ENST00000543728	PPP1R12C	Q9BZL4	782 aa		4.03	□□□□□ -1.76
HPS5-208	ENST00000543728	ALG2	Q9H553	416 aa		4.03	□□□□□ -1.76
HPS5-208	ENST00000543728	PALM3	A6NDB9	673 aa	Predicted RBP	4.02	□□□□□ -1.77
HPS5-208	ENST00000543728	FAM98C	Q17RN3	349 aa	Known RBP	4.02	□□□□□ -1.77
HPS5-208	ENST00000543728	SWT1	Q5T5J6	900 aa	Known RBP	4.02	□□□□□ -1.77
HPS5-208	ENST00000543728	PRR7	Q8TB68	274 aa		4.02	□□□□□ -1.77
HPS5-208	ENST00000543728	PRKD2	Q9BZL6	878 aa		4.02	□□□□□ -1.77
HPS5-208	ENST00000543728	TSR3	Q9UJK0	312 aa	Known RBP	4.02	□□□□□ -1.77
HPS5-208	ENST00000543728	TMEM88B	A6NKF7	163 aa		4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	USP46	P62068	366 aa		4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	PPP1R18	Q6NYC8	613 aa		4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	SAMD7	Q7Z3H4	446 aa		4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	PACS2	Q86VP3	889 aa		4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	SYMPK	Q92797	1274 aa	Known RBP	4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	EMID1	Q96A84	441 aa	Predicted RBP	4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	MTR	Q99707	1265 aa		4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	PRM3	Q9NNZ6	103 aa		4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	UST	Q9Y2C2	406 aa		4.01	□□□□□ -1.77
HPS5-208	ENST00000543728	ACIN1	Q9UKV3	1341 aa	Known RBP	4	□□□□□ -1.77
HPS5-208	ENST00000543728	PER1	O15534	1290 aa	Predicted RBP	4	□□□□□ -1.77
HPS5-208	ENST00000543728	BRD1	O95696	1058 aa		4	□□□□□ -1.77
HPS5-208	ENST00000543728	KCNA1	Q09470	495 aa		4	□□□□□ -1.77

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