RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 SBNO2Q9Y2G9 1366 aa16.62■□□□□ 0.25
DDB1-223ENST00000543658 TMF1P82094 1093 aa16.61■□□□□ 0.25
DDB1-223ENST00000543658 WAPLQ7Z5K2 1190 aa16.61■□□□□ 0.25
DDB1-223ENST00000543658 MINK1Q8N4C8 1332 aaPredicted RBP16.61■□□□□ 0.25
DDB1-223ENST00000543658 PLEKHH1Q9ULM0 1364 aa16.61■□□□□ 0.25
DDB1-223ENST00000543658 XIRP1Q702N8 1843 aaKnown RBP16.61■□□□□ 0.25
DDB1-223ENST00000543658 ZNF316A6NFI3 1004 aaPredicted RBP16.58■□□□□ 0.24
DDB1-223ENST00000543658 CDCA8Q53HL2 280 aa16.58■□□□□ 0.24
DDB1-223ENST00000543658 EVC2Q86UK5 1308 aa16.58■□□□□ 0.24
DDB1-223ENST00000543658 ITSN1Q15811 1721 aa16.58■□□□□ 0.24
DDB1-223ENST00000543658 CDC42BPGQ6DT37 1551 aa16.57■□□□□ 0.24
DDB1-223ENST00000543658 ADGRL3Q9HAR2 1447 aa16.57■□□□□ 0.24
DDB1-223ENST00000543658 FMN2Q9NZ56 1722 aa16.56■□□□□ 0.24
DDB1-223ENST00000543658 TULP4Q9NRJ4 1543 aa16.56■□□□□ 0.24
DDB1-223ENST00000543658 NCOA3Q9Y6Q9 1424 aa16.56■□□□□ 0.24
DDB1-223ENST00000543658 LRRC7Q96NW7 1537 aa16.55■□□□□ 0.24
DDB1-223ENST00000543658 TMEM94Q12767 1356 aa16.55■□□□□ 0.24
DDB1-223ENST00000543658 TESK2Q96S53 571 aa16.55■□□□□ 0.24
DDB1-223ENST00000543658 POLR3GLQ9BT43 218 aa16.55■□□□□ 0.24
DDB1-223ENST00000543658 MSH6P52701 1360 aa16.54■□□□□ 0.24
DDB1-223ENST00000543658 DISP3Q9P2K9 1392 aa16.53■□□□□ 0.24
DDB1-223ENST00000543658 LTBP4Q8N2S1 1624 aa16.53■□□□□ 0.24
DDB1-223ENST00000543658 SRPK2P78362 688 aaKnown RBP16.53■□□□□ 0.24
DDB1-223ENST00000543658 RBM33Q96EV2 1170 aaKnown RBP16.53■□□□□ 0.24
DDB1-223ENST00000543658 RGPD8O14715 1765 aaPredicted RBP16.53■□□□□ 0.24
DDB1-223ENST00000543658 WASLO00401 505 aaPredicted RBP16.51■□□□□ 0.23
DDB1-223ENST00000543658 DCCP43146 1447 aa16.51■□□□□ 0.23
DDB1-223ENST00000543658 MYOM1P52179 1685 aa16.5■□□□□ 0.23
DDB1-223ENST00000543658 CDK19Q9BWU1 502 aa16.5■□□□□ 0.23
DDB1-223ENST00000543658 ATAD2Q6PL18 1390 aa16.5■□□□□ 0.23
DDB1-223ENST00000543658 CCDC7Q96M83 1385 aa16.5■□□□□ 0.23
DDB1-223ENST00000543658 TOPAZ1Q8N9V7 1692 aa16.5■□□□□ 0.23
DDB1-223ENST00000543658 ATF3P18847 181 aa16.49■□□□□ 0.23
DDB1-223ENST00000543658 C19orf44Q9H6X5 657 aa16.49■□□□□ 0.23
DDB1-223ENST00000543658 KIF7Q2M1P5 1343 aa16.48■□□□□ 0.23
DDB1-223ENST00000543658 ANKARQ7Z5J8 1434 aa16.47■□□□□ 0.23
DDB1-223ENST00000543658 PUS7Q96PZ0 661 aaKnown RBP16.47■□□□□ 0.23
DDB1-223ENST00000543658 CABP2Q9NPB3 220 aa16.47■□□□□ 0.23
DDB1-223ENST00000543658 USP32Q8NFA0 1604 aa16.47■□□□□ 0.23
DDB1-223ENST00000543658 ILDR1Q86SU0 546 aaPredicted RBP16.46■□□□□ 0.23
DDB1-223ENST00000543658 CADPS2Q86UW7 1296 aa16.46■□□□□ 0.23
DDB1-223ENST00000543658 ATP7BP35670 1465 aa16.46■□□□□ 0.23
DDB1-223ENST00000543658 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
DDB1-223ENST00000543658 NUTM2FA1L443 756 aa16.45■□□□□ 0.22
DDB1-223ENST00000543658 TMC1Q8TDI8 760 aa16.45■□□□□ 0.22
DDB1-223ENST00000543658 NINLQ9Y2I6 1382 aa16.45■□□□□ 0.22
DDB1-223ENST00000543658 KIF1AQ12756 1690 aa16.45■□□□□ 0.22
DDB1-223ENST00000543658 C11orf95C9JLR9 678 aaPredicted RBP16.44■□□□□ 0.22
DDB1-223ENST00000543658 AKAP12Q02952 1782 aa16.43■□□□□ 0.22
DDB1-223ENST00000543658 IQSEC2Q5JU85 1478 aa16.43■□□□□ 0.22
DDB1-223ENST00000543658 NUDT16Q96DE0 195 aaKnown RBP16.43■□□□□ 0.22
DDB1-223ENST00000543658 PPIP5K1Q6PFW1 1433 aa16.43■□□□□ 0.22
DDB1-223ENST00000543658 MST1RQ04912 1400 aa16.4■□□□□ 0.22
DDB1-223ENST00000543658 CCDC61Q9Y6R9 512 aa16.4■□□□□ 0.22
DDB1-223ENST00000543658 C1orf167Q5SNV9 1468 aa16.4■□□□□ 0.22
DDB1-223ENST00000543658 MON2Q7Z3U7 1717 aa16.39■□□□□ 0.21
DDB1-223ENST00000543658 PRR36Q9H6K5 1346 aa16.39■□□□□ 0.21
DDB1-223ENST00000543658 ESCO1Q5FWF5 840 aa16.38■□□□□ 0.21
DDB1-223ENST00000543658 HDGFL2Q7Z4V5 671 aaPredicted RBP16.38■□□□□ 0.21
DDB1-223ENST00000543658 TERF2IPQ9NYB0 399 aa16.38■□□□□ 0.21
DDB1-223ENST00000543658 DDX10Q13206 875 aaKnown RBP16.37■□□□□ 0.21
DDB1-223ENST00000543658 CABP1Q9NZU7 370 aa16.37■□□□□ 0.21
DDB1-223ENST00000543658 KIF20BQ96Q89 1820 aa16.36■□□□□ 0.21
DDB1-223ENST00000543658 CERKQ8TCT0 537 aa16.36■□□□□ 0.21
DDB1-223ENST00000543658 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
DDB1-223ENST00000543658 ANKRD36BQ8N2N9 1353 aa16.36■□□□□ 0.21
DDB1-223ENST00000543658 ROBO1Q9Y6N7 1651 aa16.35■□□□□ 0.21
DDB1-223ENST00000543658 TOM1O60784 492 aa16.35■□□□□ 0.21
DDB1-223ENST00000543658 NGDNQ8NEJ9 315 aaKnown RBP16.35■□□□□ 0.21
DDB1-223ENST00000543658 PHF8Q9UPP1 1060 aa16.35■□□□□ 0.21
DDB1-223ENST00000543658 PMFBP1Q8TBY8 1022 aa16.34■□□□□ 0.21
DDB1-223ENST00000543658 SLAIN2Q9P270 581 aa16.34■□□□□ 0.21
DDB1-223ENST00000543658 A0A1W2PP64 1363 aa16.33■□□□□ 0.2
DDB1-223ENST00000543658 KTN1Q86UP2 1357 aaKnown RBP16.33■□□□□ 0.2
DDB1-223ENST00000543658 PLEKHG3A1L390 1219 aa16.32■□□□□ 0.2
DDB1-223ENST00000543658 ACEP12821 1306 aa16.32■□□□□ 0.2
DDB1-223ENST00000543658 NRKQ7Z2Y5 1582 aa16.32■□□□□ 0.2
DDB1-223ENST00000543658 PANK3Q9H999 370 aa16.32■□□□□ 0.2
DDB1-223ENST00000543658 NHSL1Q5SYE7 1610 aa16.31■□□□□ 0.2
DDB1-223ENST00000543658 NSD3Q9BZ95 1437 aa16.31■□□□□ 0.2
DDB1-223ENST00000543658 SCAF1Q9H7N4 1312 aaKnown RBP16.31■□□□□ 0.2
DDB1-223ENST00000543658 UBAP1LF5GYI3 381 aa16.31■□□□□ 0.2
DDB1-223ENST00000543658 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
DDB1-223ENST00000543658 ZNF692Q9BU19 519 aaPredicted RBP16.31■□□□□ 0.2
DDB1-223ENST00000543658 ANKRD26Q9UPS8 1709 aa16.31■□□□□ 0.2
DDB1-223ENST00000543658 CD163L1Q9NR16 1453 aa16.3■□□□□ 0.2
DDB1-223ENST00000543658 POLR3AO14802 1390 aaPredicted RBP16.3■□□□□ 0.2
DDB1-223ENST00000543658 KNSTRNQ9Y448 316 aa16.3■□□□□ 0.2
DDB1-223ENST00000543658 USP6P35125 1406 aa16.29■□□□□ 0.2
DDB1-223ENST00000543658 CPSF1Q10570 1443 aaKnown RBP16.29■□□□□ 0.2
DDB1-223ENST00000543658 EDC4Q6P2E9 1401 aaKnown RBP16.29■□□□□ 0.2
DDB1-223ENST00000543658 PSME1Q06323 249 aa16.29■□□□□ 0.2
DDB1-223ENST00000543658 NPHP3Q7Z494 1330 aa16.28■□□□□ 0.2
DDB1-223ENST00000543658 BRINP3Q76B58 766 aa16.28■□□□□ 0.2
DDB1-223ENST00000543658 PHLPP1O60346 1717 aa16.28■□□□□ 0.2
DDB1-223ENST00000543658 TRPM3Q9HCF6 1732 aaPredicted RBP16.27■□□□□ 0.19
DDB1-223ENST00000543658 BRD4O60885 1362 aaPredicted RBP16.26■□□□□ 0.19
DDB1-223ENST00000543658 FOXO3O43524 673 aa16.26■□□□□ 0.19
DDB1-223ENST00000543658 PIP4K2BP78356 416 aa16.26■□□□□ 0.19
DDB1-223ENST00000543658 CGNL1Q0VF96 1302 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms