RNA–Protein interactions for RNA: ENST00000543637.1

NUP43-206, Transcript of nucleoporin 43, humanhuman

TSL 5

Gene NUP43, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43-206ENST00000543637 C14orf93Q9H972 538 aaKnown RBP10.46□□□□□ -0.73
NUP43-206ENST00000543637 KDM2AQ9Y2K7 1162 aa10.46□□□□□ -0.73
NUP43-206ENST00000543637 C1orf167Q5SNV9 1468 aa10.45□□□□□ -0.74
NUP43-206ENST00000543637 LRPPRCP42704 1394 aaKnown RBP10.45□□□□□ -0.74
NUP43-206ENST00000543637 WAPLQ7Z5K2 1190 aa10.45□□□□□ -0.74
NUP43-206ENST00000543637 DDX17Q92841 729 aaKnown RBP10.45□□□□□ -0.74
NUP43-206ENST00000543637 SIRT1Q96EB6 747 aa10.45□□□□□ -0.74
NUP43-206ENST00000543637 LAMC1P11047 1609 aa10.44□□□□□ -0.74
NUP43-206ENST00000543637 ABCC11Q96J66 1382 aa10.44□□□□□ -0.74
NUP43-206ENST00000543637 CFAP70Q5T0N1 1121 aa10.44□□□□□ -0.74
NUP43-206ENST00000543637 DCAF11Q8TEB1 546 aa10.44□□□□□ -0.74
NUP43-206ENST00000543637 POGKQ9P215 609 aa10.44□□□□□ -0.74
NUP43-206ENST00000543637 KNDC1Q76NI1 1749 aa10.44□□□□□ -0.74
NUP43-206ENST00000543637 PIK3C2GO75747 1445 aa10.43□□□□□ -0.74
NUP43-206ENST00000543637 NPHP3Q7Z494 1330 aa10.43□□□□□ -0.74
NUP43-206ENST00000543637 NUTM2FA1L443 756 aa10.43□□□□□ -0.74
NUP43-206ENST00000543637 PRAG1Q86YV5 1406 aa10.42□□□□□ -0.74
NUP43-206ENST00000543637 YTHDC2Q9H6S0 1430 aaKnown RBP10.42□□□□□ -0.74
NUP43-206ENST00000543637 RXRBP28702 533 aa10.42□□□□□ -0.74
NUP43-206ENST00000543637 NGLY1Q96IV0 654 aa10.42□□□□□ -0.74
NUP43-206ENST00000543637 C8orf37Q96NL8 207 aa10.42□□□□□ -0.74
NUP43-206ENST00000543637 SOS2Q07890 1332 aaPredicted RBP10.41□□□□□ -0.74
NUP43-206ENST00000543637 FOXO3O43524 673 aa10.41□□□□□ -0.74
NUP43-206ENST00000543637 RGPD8O14715 1765 aaPredicted RBP10.41□□□□□ -0.74
NUP43-206ENST00000543637 MYOM2P54296 1465 aa10.41□□□□□ -0.74
NUP43-206ENST00000543637 CDC42BPGQ6DT37 1551 aa10.4□□□□□ -0.74
NUP43-206ENST00000543637 AFF2P51816 1311 aa10.4□□□□□ -0.74
NUP43-206ENST00000543637 ADAMTS2O95450 1211 aa10.4□□□□□ -0.74
NUP43-206ENST00000543637 PSME1Q06323 249 aa10.4□□□□□ -0.74
NUP43-206ENST00000543637 SAFB2Q14151 953 aaKnown RBP eCLIP10.4□□□□□ -0.74
NUP43-206ENST00000543637 QTRT2Q9H974 415 aaKnown RBP10.4□□□□□ -0.74
NUP43-206ENST00000543637 TECPR2O15040 1411 aa10.4□□□□□ -0.75
NUP43-206ENST00000543637 LRP6O75581 1613 aa10.4□□□□□ -0.75
NUP43-206ENST00000543637 PNPLA6Q8IY17 1366 aa10.39□□□□□ -0.75
NUP43-206ENST00000543637 FMN2Q9NZ56 1722 aa10.39□□□□□ -0.75
NUP43-206ENST00000543637 HAP1P54257 671 aaPredicted RBP10.39□□□□□ -0.75
NUP43-206ENST00000543637 PRAM1Q96QH2 718 aa10.39□□□□□ -0.75
NUP43-206ENST00000543637 TRAK1Q9UPV9 953 aa10.39□□□□□ -0.75
NUP43-206ENST00000543637 KRT28Q7Z3Y7 464 aa10.38□□□□□ -0.75
NUP43-206ENST00000543637 PLEKHH1Q9ULM0 1364 aa10.38□□□□□ -0.75
NUP43-206ENST00000543637 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
NUP43-206ENST00000543637 NRXN1Q9ULB1 1477 aa10.37□□□□□ -0.75
NUP43-206ENST00000543637 XPCQ01831 940 aaPredicted RBP10.37□□□□□ -0.75
NUP43-206ENST00000543637 PHF8Q9UPP1 1060 aa10.37□□□□□ -0.75
NUP43-206ENST00000543637 MARF1Q9Y4F3 1742 aaKnown RBP10.36□□□□□ -0.75
NUP43-206ENST00000543637 RBM6P78332 1123 aaKnown RBP10.36□□□□□ -0.75
NUP43-206ENST00000543637 LMOD2Q6P5Q4 547 aa10.36□□□□□ -0.75
NUP43-206ENST00000543637 USP21Q9UK80 565 aa10.36□□□□□ -0.75
NUP43-206ENST00000543637 DLC1Q96QB1 1528 aa10.35□□□□□ -0.75
NUP43-206ENST00000543637 COL22A1Q8NFW1 1626 aaPredicted RBP10.34□□□□□ -0.75
NUP43-206ENST00000543637 TRPC5Q9UL62 973 aaPredicted RBP10.34□□□□□ -0.75
NUP43-206ENST00000543637 EIF3AQ14152 1382 aaKnown RBP10.34□□□□□ -0.75
NUP43-206ENST00000543637 MINK1Q8N4C8 1332 aaPredicted RBP10.33□□□□□ -0.76
NUP43-206ENST00000543637 PMFBP1Q8TBY8 1022 aa10.33□□□□□ -0.76
NUP43-206ENST00000543637 HIRIP3Q9BW71 556 aaPredicted RBP10.33□□□□□ -0.76
NUP43-206ENST00000543637 SPATA31A3Q5VYP0 1347 aa10.33□□□□□ -0.76
NUP43-206ENST00000543637 PXDNQ92626 1479 aa10.32□□□□□ -0.76
NUP43-206ENST00000543637 WASLO00401 505 aaPredicted RBP10.32□□□□□ -0.76
NUP43-206ENST00000543637 NGDNQ8NEJ9 315 aaKnown RBP10.32□□□□□ -0.76
NUP43-206ENST00000543637 CDK12Q9NYV4 1490 aaPredicted RBP10.31□□□□□ -0.76
NUP43-206ENST00000543637 GPRASP1Q5JY77 1395 aa10.31□□□□□ -0.76
NUP43-206ENST00000543637 KIAA1210Q9ULL0 1709 aa10.31□□□□□ -0.76
NUP43-206ENST00000543637 PLEKHG5O94827 1062 aa10.31□□□□□ -0.76
NUP43-206ENST00000543637 FNBP4Q8N3X1 1017 aaPredicted RBP10.31□□□□□ -0.76
NUP43-206ENST00000543637 ANKARQ7Z5J8 1434 aa10.31□□□□□ -0.76
NUP43-206ENST00000543637 UPF1Q92900 1129 aaKnown RBP eCLIP10.3□□□□□ -0.76
NUP43-206ENST00000543637 ADGRB1O14514 1584 aa10.3□□□□□ -0.76
NUP43-206ENST00000543637 ITSN1Q15811 1721 aa10.3□□□□□ -0.76
NUP43-206ENST00000543637 PAK3O75914 559 aaPredicted RBP10.29□□□□□ -0.76
NUP43-206ENST00000543637 NEUROD1Q13562 356 aa10.29□□□□□ -0.76
NUP43-206ENST00000543637 ARHGEF28Q8N1W1 1705 aaKnown RBP10.29□□□□□ -0.76
NUP43-206ENST00000543637 SBNO1A3KN83 1393 aa10.28□□□□□ -0.76
NUP43-206ENST00000543637 ARHGEF10O15013 1369 aa10.28□□□□□ -0.76
NUP43-206ENST00000543637 ADGRB2O60241 1585 aa10.28□□□□□ -0.76
NUP43-206ENST00000543637 CDK19Q9BWU1 502 aa10.28□□□□□ -0.76
NUP43-206ENST00000543637 CCDC9Q9Y3X0 531 aaKnown RBP10.28□□□□□ -0.76
NUP43-206ENST00000543637 TNS3Q68CZ2 1445 aa10.27□□□□□ -0.77
NUP43-206ENST00000543637 USP32Q8NFA0 1604 aa10.27□□□□□ -0.77
NUP43-206ENST00000543637 UNC5CLQ8IV45 518 aa10.27□□□□□ -0.77
NUP43-206ENST00000543637 CABLES1Q8TDN4 633 aa10.27□□□□□ -0.77
NUP43-206ENST00000543637 NUDT16Q96DE0 195 aaKnown RBP10.27□□□□□ -0.77
NUP43-206ENST00000543637 GJD4Q96KN9 370 aaPredicted RBP10.27□□□□□ -0.77
NUP43-206ENST00000543637 TULP4Q9NRJ4 1543 aa10.27□□□□□ -0.77
NUP43-206ENST00000543637 SIN3AQ96ST3 1273 aa10.26□□□□□ -0.77
NUP43-206ENST00000543637 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.25□□□□□ -0.77
NUP43-206ENST00000543637 SRPK2P78362 688 aaKnown RBP10.25□□□□□ -0.77
NUP43-206ENST00000543637 NBPF1Q3BBV0 1214 aa10.25□□□□□ -0.77
NUP43-206ENST00000543637 L3MBTL2Q969R5 705 aa10.25□□□□□ -0.77
NUP43-206ENST00000543637 CCDC61Q9Y6R9 512 aa10.25□□□□□ -0.77
NUP43-206ENST00000543637 ATRNO75882 1429 aa10.24□□□□□ -0.77
NUP43-206ENST00000543637 CCDC125Q86Z20 511 aa10.24□□□□□ -0.77
NUP43-206ENST00000543637 PRR36Q9H6K5 1346 aa10.24□□□□□ -0.77
NUP43-206ENST00000543637 CENPJQ9HC77 1338 aaPredicted RBP10.24□□□□□ -0.77
NUP43-206ENST00000543637 ATAD2Q6PL18 1390 aa10.24□□□□□ -0.77
NUP43-206ENST00000543637 RGS12O14924 1447 aa10.24□□□□□ -0.77
NUP43-206ENST00000543637 BCL9LQ86UU0 1499 aa10.23□□□□□ -0.77
NUP43-206ENST00000543637 NWD2Q9ULI1 1742 aa10.23□□□□□ -0.77
NUP43-206ENST00000543637 TRPM3Q9HCF6 1732 aaPredicted RBP10.22□□□□□ -0.77
NUP43-206ENST00000543637 A0A0G2JS52 829 aa10.22□□□□□ -0.77
NUP43-206ENST00000543637 FAM83GA6ND36 823 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms