RNA–Protein interactions for RNA: ENST00000543525.3

PPME1-208, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 1 (best)

Gene PPME1, Length 1,928 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-208ENST00000543525 NKTRP30414 1462 aaKnown RBP17.61■□□□□ 0.41
PPME1-208ENST00000543525 ABCC3O15438 1527 aa17.6■□□□□ 0.41
PPME1-208ENST00000543525 RAPGEF3O95398 923 aa17.6■□□□□ 0.41
PPME1-208ENST00000543525 TRAK1Q9UPV9 953 aa17.6■□□□□ 0.41
PPME1-208ENST00000543525 QRICH2Q9H0J4 1663 aa17.6■□□□□ 0.41
PPME1-208ENST00000543525 ILDR2Q71H61 639 aa17.59■□□□□ 0.41
PPME1-208ENST00000543525 KDM2BQ8NHM5 1336 aa17.59■□□□□ 0.41
PPME1-208ENST00000543525 ADGRB1O14514 1584 aa17.59■□□□□ 0.41
PPME1-208ENST00000543525 NPM2Q86SE8 214 aaKnown RBP17.59■□□□□ 0.41
PPME1-208ENST00000543525 MORC1Q86VD1 984 aa17.59■□□□□ 0.41
PPME1-208ENST00000543525 NSD3Q9BZ95 1437 aa17.58■□□□□ 0.41
PPME1-208ENST00000543525 NEO1Q92859 1461 aa17.57■□□□□ 0.4
PPME1-208ENST00000543525 CAMSAP1Q5T5Y3 1602 aa17.57■□□□□ 0.4
PPME1-208ENST00000543525 PUS7Q96PZ0 661 aaKnown RBP17.57■□□□□ 0.4
PPME1-208ENST00000543525 HSPA2P54652 639 aa17.56■□□□□ 0.4
PPME1-208ENST00000543525 USP32Q8NFA0 1604 aa17.55■□□□□ 0.4
PPME1-208ENST00000543525 VGFO15240 615 aaPredicted RBP17.54■□□□□ 0.4
PPME1-208ENST00000543525 SPINK5Q9NQ38 1064 aaPredicted RBP17.54■□□□□ 0.4
PPME1-208ENST00000543525 CFAP65Q6ZU64 1925 aaKnown RBP17.53■□□□□ 0.4
PPME1-208ENST00000543525 NBR1Q14596 966 aa17.53■□□□□ 0.4
PPME1-208ENST00000543525 TMEM132EQ6IEE7 984 aa17.53■□□□□ 0.4
PPME1-208ENST00000543525 SLC12A5Q9H2X9 1139 aa17.53■□□□□ 0.4
PPME1-208ENST00000543525 PIK3C2BO00750 1634 aa17.52■□□□□ 0.4
PPME1-208ENST00000543525 CGNL1Q0VF96 1302 aa17.52■□□□□ 0.4
PPME1-208ENST00000543525 EVC2Q86UK5 1308 aa17.52■□□□□ 0.4
PPME1-208ENST00000543525 DDRGK1Q96HY6 314 aa17.52■□□□□ 0.4
PPME1-208ENST00000543525 NINLQ9Y2I6 1382 aa17.52■□□□□ 0.39
PPME1-208ENST00000543525 RUNDC1Q96C34 613 aa17.51■□□□□ 0.39
PPME1-208ENST00000543525 WWC1Q8IX03 1113 aa17.51■□□□□ 0.39
PPME1-208ENST00000543525 CFAP53Q96M91 514 aa17.51■□□□□ 0.39
PPME1-208ENST00000543525 SHPRHQ149N8 1683 aa17.5■□□□□ 0.39
PPME1-208ENST00000543525 ARHGAP31Q2M1Z3 1444 aa17.5■□□□□ 0.39
PPME1-208ENST00000543525 RIMS1Q86UR5 1692 aaKnown RBP17.5■□□□□ 0.39
PPME1-208ENST00000543525 RTL5Q5HYW3 569 aaPredicted RBP17.5■□□□□ 0.39
PPME1-208ENST00000543525 DIP2CQ9Y2E4 1556 aa17.5■□□□□ 0.39
PPME1-208ENST00000543525 NEXMIFQ5QGS0 1516 aa17.49■□□□□ 0.39
PPME1-208ENST00000543525 SIGLEC1Q9BZZ2 1709 aa17.49■□□□□ 0.39
PPME1-208ENST00000543525 NSD2O96028 1365 aa17.49■□□□□ 0.39
PPME1-208ENST00000543525 BCAR3O75815 825 aa17.49■□□□□ 0.39
PPME1-208ENST00000543525 PDE3AQ14432 1141 aa17.49■□□□□ 0.39
PPME1-208ENST00000543525 DEKP35659 375 aaKnown RBP17.48■□□□□ 0.39
PPME1-208ENST00000543525 ANKRD36BQ8N2N9 1353 aa17.47■□□□□ 0.39
PPME1-208ENST00000543525 TNNT2P45379 298 aaPredicted RBP17.47■□□□□ 0.39
PPME1-208ENST00000543525 SKAP1Q86WV1 359 aa17.47■□□□□ 0.39
PPME1-208ENST00000543525 DMRT2Q9Y5R5 561 aa17.47■□□□□ 0.39
PPME1-208ENST00000543525 ARHGEF28Q8N1W1 1705 aaKnown RBP17.47■□□□□ 0.39
PPME1-208ENST00000543525 ARHGEF40Q8TER5 1519 aa17.47■□□□□ 0.39
PPME1-208ENST00000543525 ZFYVE9O95405 1425 aa17.46■□□□□ 0.39
PPME1-208ENST00000543525 FAM161AQ3B820 660 aa17.46■□□□□ 0.39
PPME1-208ENST00000543525 BCL11AQ9H165 835 aa17.46■□□□□ 0.39
PPME1-208ENST00000543525 TULP4Q9NRJ4 1543 aa17.45■□□□□ 0.38
PPME1-208ENST00000543525 MTHFSP49914 203 aa17.45■□□□□ 0.38
PPME1-208ENST00000543525 NCBP3Q53F19 620 aaKnown RBP17.45■□□□□ 0.38
PPME1-208ENST00000543525 WDR63Q8IWG1 891 aa17.45■□□□□ 0.38
PPME1-208ENST00000543525 SLC52A1Q9NWF4 448 aa17.45■□□□□ 0.38
PPME1-208ENST00000543525 IQSEC2Q5JU85 1478 aa17.45■□□□□ 0.38
PPME1-208ENST00000543525 CANXP27824 592 aaKnown RBP17.45■□□□□ 0.38
PPME1-208ENST00000543525 TCP11L2Q8N4U5 519 aa17.44■□□□□ 0.38
PPME1-208ENST00000543525 CCDC27Q2M243 656 aa17.43■□□□□ 0.38
PPME1-208ENST00000543525 NUTM2DQ5VT03 806 aaPredicted RBP17.43■□□□□ 0.38
PPME1-208ENST00000543525 IDI1Q13907 227 aa17.43■□□□□ 0.38
PPME1-208ENST00000543525 PLPPR3Q6T4P5 718 aa17.43■□□□□ 0.38
PPME1-208ENST00000543525 RICTORQ6R327 1708 aa17.42■□□□□ 0.38
PPME1-208ENST00000543525 PPM1GO15355 546 aaPredicted RBP17.41■□□□□ 0.38
PPME1-208ENST00000543525 AAMPQ13685 434 aa17.41■□□□□ 0.38
PPME1-208ENST00000543525 NEUROD2Q15784 382 aa17.41■□□□□ 0.38
PPME1-208ENST00000543525 RRP7AQ9Y3A4 280 aaKnown RBP17.41■□□□□ 0.38
PPME1-208ENST00000543525 CABP2Q9NPB3 220 aa17.4■□□□□ 0.38
PPME1-208ENST00000543525 C8orf34Q49A92 452 aa17.39■□□□□ 0.37
PPME1-208ENST00000543525 RGS3P49796 1198 aa17.39■□□□□ 0.37
PPME1-208ENST00000543525 CLUAP1Q96AJ1 413 aa17.39■□□□□ 0.37
PPME1-208ENST00000543525 USP35Q9P2H5 1018 aa17.39■□□□□ 0.37
PPME1-208ENST00000543525 RARSP54136 660 aaKnown RBP17.38■□□□□ 0.37
PPME1-208ENST00000543525 MYH16Q9H6N6 1097 aa17.38■□□□□ 0.37
PPME1-208ENST00000543525 PANK1Q8TE04 598 aa17.37■□□□□ 0.37
PPME1-208ENST00000543525 YEATS2Q9ULM3 1422 aa17.36■□□□□ 0.37
PPME1-208ENST00000543525 PREX1Q8TCU6 1659 aa17.36■□□□□ 0.37
PPME1-208ENST00000543525 ATAD2Q6PL18 1390 aa17.36■□□□□ 0.37
PPME1-208ENST00000543525 ABCC11Q96J66 1382 aa17.36■□□□□ 0.37
PPME1-208ENST00000543525 U2AF1L5P0DN76 240 aaPredicted RBP17.36■□□□□ 0.37
PPME1-208ENST00000543525 SRPK2P78362 688 aaKnown RBP17.36■□□□□ 0.37
PPME1-208ENST00000543525 U2AF1Q01081 240 aaKnown RBP eCLIP17.36■□□□□ 0.37
PPME1-208ENST00000543525 DAXXQ9UER7 740 aaPredicted RBP17.36■□□□□ 0.37
PPME1-208ENST00000543525 COG6Q9Y2V7 657 aa17.36■□□□□ 0.37
PPME1-208ENST00000543525 LAS1LQ9Y4W2 734 aaKnown RBP17.36■□□□□ 0.37
PPME1-208ENST00000543525 SPATA31D1Q6ZQQ2 1576 aa17.36■□□□□ 0.37
PPME1-208ENST00000543525 IGHDP01880 384 aa17.35■□□□□ 0.37
PPME1-208ENST00000543525 FRAT1Q92837 279 aaPredicted RBP17.35■□□□□ 0.37
PPME1-208ENST00000543525 STK26Q9P289 416 aa17.35■□□□□ 0.37
PPME1-208ENST00000543525 TMEM131LA2VDJ0 1609 aa17.35■□□□□ 0.37
PPME1-208ENST00000543525 SAFB2Q14151 953 aaKnown RBP eCLIP17.35■□□□□ 0.37
PPME1-208ENST00000543525 TERF2IPQ9NYB0 399 aa17.35■□□□□ 0.37
PPME1-208ENST00000543525 A0A1W2PP64 1363 aa17.34■□□□□ 0.37
PPME1-208ENST00000543525 MAPK8IP3Q9UPT6 1336 aa17.34■□□□□ 0.37
PPME1-208ENST00000543525 ADGRB2O60241 1585 aa17.34■□□□□ 0.37
PPME1-208ENST00000543525 PMFBP1Q8TBY8 1022 aa17.34■□□□□ 0.37
PPME1-208ENST00000543525 NEFMP07197 916 aa17.33■□□□□ 0.36
PPME1-208ENST00000543525 POGKQ9P215 609 aa17.33■□□□□ 0.36
PPME1-208ENST00000543525 CT47B1P0C2W7 299 aaPredicted RBP17.32■□□□□ 0.36
PPME1-208ENST00000543525 MLECQ14165 292 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms