RNA–Protein interactions for RNA: ENST00000543262.5

ME3-212, Transcript of malic enzyme 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ME3, Length 2,311 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-212ENST00000543262 ESF1Q9H501 851 aaKnown RBP27.3■■□□□ 1.96
ME3-212ENST00000543262 RCAN3Q9UKA8 241 aa27.3■■□□□ 1.96
ME3-212ENST00000543262 USP32Q8NFA0 1604 aa27.29■■□□□ 1.96
ME3-212ENST00000543262 ZMYM3Q14202 1370 aa27.29■■□□□ 1.96
ME3-212ENST00000543262 MORC1Q86VD1 984 aa27.29■■□□□ 1.96
ME3-212ENST00000543262 PRAM1Q96QH2 718 aa27.29■■□□□ 1.96
ME3-212ENST00000543262 RIMS2Q9UQ26 1411 aa27.28■■□□□ 1.96
ME3-212ENST00000543262 ANKRD36BQ8N2N9 1353 aa27.27■■□□□ 1.96
ME3-212ENST00000543262 POGKQ9P215 609 aa27.27■■□□□ 1.96
ME3-212ENST00000543262 CGNL1Q0VF96 1302 aa27.26■■□□□ 1.95
ME3-212ENST00000543262 PLEKHH1Q9ULM0 1364 aa27.25■■□□□ 1.95
ME3-212ENST00000543262 MINK1Q8N4C8 1332 aaPredicted RBP27.24■■□□□ 1.95
ME3-212ENST00000543262 SRPK2P78362 688 aaKnown RBP27.24■■□□□ 1.95
ME3-212ENST00000543262 RRP1P56182 461 aaKnown RBP27.24■■□□□ 1.95
ME3-212ENST00000543262 POLR3AO14802 1390 aaPredicted RBP27.23■■□□□ 1.95
ME3-212ENST00000543262 TNNT2P45379 298 aaPredicted RBP27.23■■□□□ 1.95
ME3-212ENST00000543262 CCDC146Q8IYE0 955 aa27.22■■□□□ 1.95
ME3-212ENST00000543262 NINLQ9Y2I6 1382 aa27.19■■□□□ 1.94
ME3-212ENST00000543262 SETD1AO15047 1707 aaKnown RBP27.19■■□□□ 1.94
ME3-212ENST00000543262 ZNF521Q96K83 1311 aa27.19■■□□□ 1.94
ME3-212ENST00000543262 ATAD2Q6PL18 1390 aa27.17■■□□□ 1.94
ME3-212ENST00000543262 A0A1W2PP64 1363 aa27.16■■□□□ 1.94
ME3-212ENST00000543262 NSD2O96028 1365 aa27.16■■□□□ 1.94
ME3-212ENST00000543262 APAF1O14727 1248 aa27.16■■□□□ 1.94
ME3-212ENST00000543262 SHPRHQ149N8 1683 aa27.15■■□□□ 1.94
ME3-212ENST00000543262 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.15■■□□□ 1.94
ME3-212ENST00000543262 CDK19Q9BWU1 502 aa27.14■■□□□ 1.94
ME3-212ENST00000543262 TNRQ92752 1358 aa27.14■■□□□ 1.94
ME3-212ENST00000543262 DLC1Q96QB1 1528 aa27.14■■□□□ 1.93
ME3-212ENST00000543262 NRXN3Q9Y4C0 1643 aa27.14■■□□□ 1.93
ME3-212ENST00000543262 GOLGA2Q08379 1002 aa27.13■■□□□ 1.93
ME3-212ENST00000543262 CCDC136Q96JN2 1154 aa27.13■■□□□ 1.93
ME3-212ENST00000543262 MTHFSP49914 203 aa27.12■■□□□ 1.93
ME3-212ENST00000543262 WAPLQ7Z5K2 1190 aa27.12■■□□□ 1.93
ME3-212ENST00000543262 ABCC11Q96J66 1382 aa27.11■■□□□ 1.93
ME3-212ENST00000543262 DUSP27Q5VZP5 1158 aa27.11■■□□□ 1.93
ME3-212ENST00000543262 TERF2IPQ9NYB0 399 aa27.11■■□□□ 1.93
ME3-212ENST00000543262 RBM19Q9Y4C8 960 aaKnown RBP27.1■■□□□ 1.93
ME3-212ENST00000543262 CD163L1Q9NR16 1453 aa27.1■■□□□ 1.93
ME3-212ENST00000543262 EXOC6Q8TAG9 804 aa27.08■■□□□ 1.93
ME3-212ENST00000543262 SLFN5Q08AF3 891 aa27.07■■□□□ 1.92
ME3-212ENST00000543262 HDGFP51858 240 aaKnown RBP27.07■■□□□ 1.92
ME3-212ENST00000543262 METP08581 1390 aa27.07■■□□□ 1.92
ME3-212ENST00000543262 UBR1Q8IWV7 1749 aa27.06■■□□□ 1.92
ME3-212ENST00000543262 CFAP53Q96M91 514 aa27.06■■□□□ 1.92
ME3-212ENST00000543262 PLIN1O60240 522 aa27.05■■□□□ 1.92
ME3-212ENST00000543262 NGEFQ8N5V2 710 aa27.05■■□□□ 1.92
ME3-212ENST00000543262 CABP1Q9NZU7 370 aa27.05■■□□□ 1.92
ME3-212ENST00000543262 GGNBP2Q9H3C7 697 aa27.04■■□□□ 1.92
ME3-212ENST00000543262 TRMT2AQ8IZ69 625 aaKnown RBP27.04■■□□□ 1.92
ME3-212ENST00000543262 HDGFL2Q7Z4V5 671 aaPredicted RBP27.03■■□□□ 1.92
ME3-212ENST00000543262 TMEM2Q9UHN6 1383 aa27.02■■□□□ 1.92
ME3-212ENST00000543262 FYB1O15117 783 aa27.02■■□□□ 1.92
ME3-212ENST00000543262 ANKRD26Q9UPS8 1709 aa27.02■■□□□ 1.92
ME3-212ENST00000543262 SPINK5Q9NQ38 1064 aaPredicted RBP27.01■■□□□ 1.91
ME3-212ENST00000543262 TXNDC2Q86VQ3 553 aa27■■□□□ 1.91
ME3-212ENST00000543262 RUNDC1Q96C34 613 aa27■■□□□ 1.91
ME3-212ENST00000543262 NLRP1Q9C000 1473 aa26.99■■□□□ 1.91
ME3-212ENST00000543262 CEBPAP49715 358 aaPredicted RBP26.98■■□□□ 1.91
ME3-212ENST00000543262 MED14O60244 1454 aa26.98■■□□□ 1.91
ME3-212ENST00000543262 DMRT2Q9Y5R5 561 aa26.97■■□□□ 1.91
ME3-212ENST00000543262 KNDC1Q76NI1 1749 aa26.97■■□□□ 1.91
ME3-212ENST00000543262 E9PSI1 815 aa26.96■■□□□ 1.91
ME3-212ENST00000543262 WWC1Q8IX03 1113 aa26.96■■□□□ 1.91
ME3-212ENST00000543262 KIF20BQ96Q89 1820 aa26.95■■□□□ 1.9
ME3-212ENST00000543262 WASLO00401 505 aaPredicted RBP26.95■■□□□ 1.9
ME3-212ENST00000543262 TCP11L2Q8N4U5 519 aa26.94■■□□□ 1.9
ME3-212ENST00000543262 SIRT1Q96EB6 747 aa26.94■■□□□ 1.9
ME3-212ENST00000543262 NKTRP30414 1462 aaKnown RBP26.93■■□□□ 1.9
ME3-212ENST00000543262 IQSEC2Q5JU85 1478 aa26.93■■□□□ 1.9
ME3-212ENST00000543262 TECPR2O15040 1411 aa26.93■■□□□ 1.9
ME3-212ENST00000543262 FAM135BQ49AJ0 1406 aa26.93■■□□□ 1.9
ME3-212ENST00000543262 ATP7BP35670 1465 aa26.93■■□□□ 1.9
ME3-212ENST00000543262 NEUROD2Q15784 382 aa26.93■■□□□ 1.9
ME3-212ENST00000543262 CRBNQ96SW2 442 aa26.92■■□□□ 1.9
ME3-212ENST00000543262 RRP7AQ9Y3A4 280 aaKnown RBP26.92■■□□□ 1.9
ME3-212ENST00000543262 C3P01024 1663 aa26.92■■□□□ 1.9
ME3-212ENST00000543262 U2AF1L5P0DN76 240 aaPredicted RBP26.91■■□□□ 1.9
ME3-212ENST00000543262 U2AF1Q01081 240 aaKnown RBP eCLIP26.91■■□□□ 1.9
ME3-212ENST00000543262 CPS1P31327 1500 aa26.9■■□□□ 1.9
ME3-212ENST00000543262 LTKP29376 864 aa26.9■■□□□ 1.9
ME3-212ENST00000543262 C20orf194Q5TEA3 1177 aa26.9■■□□□ 1.9
ME3-212ENST00000543262 ADAMTS13Q76LX8 1427 aa26.9■■□□□ 1.9
ME3-212ENST00000543262 SUGP2Q8IX01 1082 aaKnown RBP eCLIP26.89■■□□□ 1.89
ME3-212ENST00000543262 TRHP20396 242 aaPredicted RBP26.88■■□□□ 1.89
ME3-212ENST00000543262 COL3A1P02461 1466 aaPredicted RBP26.88■■□□□ 1.89
ME3-212ENST00000543262 PHF23Q9BUL5 403 aaPredicted RBP26.88■■□□□ 1.89
ME3-212ENST00000543262 PPIP5K1Q6PFW1 1433 aa26.87■■□□□ 1.89
ME3-212ENST00000543262 PLEKHG1Q9ULL1 1385 aa26.87■■□□□ 1.89
ME3-212ENST00000543262 FER1L4A9Z1Z3 1794 aa26.87■■□□□ 1.89
ME3-212ENST00000543262 PLPPR3Q6T4P5 718 aa26.86■■□□□ 1.89
ME3-212ENST00000543262 NUDT16Q96DE0 195 aaKnown RBP26.85■■□□□ 1.89
ME3-212ENST00000543262 CPSF1Q10570 1443 aaKnown RBP26.85■■□□□ 1.89
ME3-212ENST00000543262 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.85■■□□□ 1.89
ME3-212ENST00000543262 ROBO2Q9HCK4 1378 aa26.84■■□□□ 1.89
ME3-212ENST00000543262 U2SURPO15042 1029 aaKnown RBP26.83■■□□□ 1.89
ME3-212ENST00000543262 CCDC27Q2M243 656 aa26.83■■□□□ 1.89
ME3-212ENST00000543262 WDR63Q8IWG1 891 aa26.82■■□□□ 1.88
ME3-212ENST00000543262 NCKAP5LQ9HCH0 1330 aa26.82■■□□□ 1.88
ME3-212ENST00000543262 CCDC61Q9Y6R9 512 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 326.4 ms