RNA–Protein interactions for RNA: ENST00000543178.5

CELF1-221, Transcript of CUGBP Elav-like family member 1, humanhuman

TSL 4

Gene CELF1, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CELF1-221ENST00000543178 MST1RQ04912 1400 aa13.62□□□□□ -0.23
CELF1-221ENST00000543178 PLEKHH1Q9ULM0 1364 aa13.61□□□□□ -0.23
CELF1-221ENST00000543178 NBPF1Q3BBV0 1214 aa13.61□□□□□ -0.23
CELF1-221ENST00000543178 ADGRB2O60241 1585 aa13.61□□□□□ -0.23
CELF1-221ENST00000543178 GPRASP1Q5JY77 1395 aa13.6□□□□□ -0.23
CELF1-221ENST00000543178 PRAM1Q96QH2 718 aa13.6□□□□□ -0.23
CELF1-221ENST00000543178 TRAK1Q9UPV9 953 aa13.6□□□□□ -0.23
CELF1-221ENST00000543178 FMN2Q9NZ56 1722 aa13.59□□□□□ -0.23
CELF1-221ENST00000543178 NBPF8Q3BBV2 869 aa13.59□□□□□ -0.23
CELF1-221ENST00000543178 SCAF1Q9H7N4 1312 aaKnown RBP13.59□□□□□ -0.23
CELF1-221ENST00000543178 CCER1Q8TC90 406 aaPredicted RBP13.58□□□□□ -0.24
CELF1-221ENST00000543178 POGKQ9P215 609 aa13.58□□□□□ -0.24
CELF1-221ENST00000543178 C1orf167Q5SNV9 1468 aa13.58□□□□□ -0.24
CELF1-221ENST00000543178 RALGAPBQ86X10 1494 aa13.58□□□□□ -0.24
CELF1-221ENST00000543178 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
CELF1-221ENST00000543178 HSPA1LP34931 641 aa13.57□□□□□ -0.24
CELF1-221ENST00000543178 BRINP3Q76B58 766 aa13.56□□□□□ -0.24
CELF1-221ENST00000543178 NHSL1Q5SYE7 1610 aa13.56□□□□□ -0.24
CELF1-221ENST00000543178 ROCK2O75116 1388 aaKnown RBP13.56□□□□□ -0.24
CELF1-221ENST00000543178 PHLPP1O60346 1717 aa13.54□□□□□ -0.24
CELF1-221ENST00000543178 EIF3AQ14152 1382 aaKnown RBP13.54□□□□□ -0.24
CELF1-221ENST00000543178 ANKARQ7Z5J8 1434 aa13.54□□□□□ -0.24
CELF1-221ENST00000543178 RGPD8O14715 1765 aaPredicted RBP13.53□□□□□ -0.24
CELF1-221ENST00000543178 COL16A1Q07092 1604 aaPredicted RBP13.53□□□□□ -0.24
CELF1-221ENST00000543178 WASLO00401 505 aaPredicted RBP13.52□□□□□ -0.25
CELF1-221ENST00000543178 SAFB2Q14151 953 aaKnown RBP eCLIP13.52□□□□□ -0.25
CELF1-221ENST00000543178 CENPJQ9HC77 1338 aaPredicted RBP13.52□□□□□ -0.25
CELF1-221ENST00000543178 KIF1AQ12756 1690 aa13.52□□□□□ -0.25
CELF1-221ENST00000543178 QRICH2Q9H0J4 1663 aa13.52□□□□□ -0.25
CELF1-221ENST00000543178 USP32Q8NFA0 1604 aa13.51□□□□□ -0.25
CELF1-221ENST00000543178 TULP4Q9NRJ4 1543 aa13.5□□□□□ -0.25
CELF1-221ENST00000543178 MINK1Q8N4C8 1332 aaPredicted RBP13.5□□□□□ -0.25
CELF1-221ENST00000543178 ORAI2Q96SN7 254 aa13.5□□□□□ -0.25
CELF1-221ENST00000543178 CARD11Q9BXL7 1154 aa13.5□□□□□ -0.25
CELF1-221ENST00000543178 SBNO2Q9Y2G9 1366 aa13.49□□□□□ -0.25
CELF1-221ENST00000543178 ESCO1Q5FWF5 840 aa13.49□□□□□ -0.25
CELF1-221ENST00000543178 ITSN1Q15811 1721 aa13.49□□□□□ -0.25
CELF1-221ENST00000543178 SOS2Q07890 1332 aaPredicted RBP13.48□□□□□ -0.25
CELF1-221ENST00000543178 SHPRHQ149N8 1683 aa13.47□□□□□ -0.25
CELF1-221ENST00000543178 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
CELF1-221ENST00000543178 HIRIP3Q9BW71 556 aaPredicted RBP13.47□□□□□ -0.25
CELF1-221ENST00000543178 JCADQ9P266 1359 aa13.46□□□□□ -0.25
CELF1-221ENST00000543178 CDK19Q9BWU1 502 aa13.46□□□□□ -0.25
CELF1-221ENST00000543178 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
CELF1-221ENST00000543178 ATP7BP35670 1465 aa13.46□□□□□ -0.25
CELF1-221ENST00000543178 TOPAZ1Q8N9V7 1692 aa13.46□□□□□ -0.26
CELF1-221ENST00000543178 PRR36Q9H6K5 1346 aa13.45□□□□□ -0.26
CELF1-221ENST00000543178 PXDNQ92626 1479 aa13.45□□□□□ -0.26
CELF1-221ENST00000543178 NUTM2FA1L443 756 aa13.45□□□□□ -0.26
CELF1-221ENST00000543178 SLC24A1O60721 1099 aa13.45□□□□□ -0.26
CELF1-221ENST00000543178 LRRC59Q96AG4 307 aaKnown RBP13.45□□□□□ -0.26
CELF1-221ENST00000543178 NUDT16Q96DE0 195 aaKnown RBP13.44□□□□□ -0.26
CELF1-221ENST00000543178 EVC2Q86UK5 1308 aa13.43□□□□□ -0.26
CELF1-221ENST00000543178 FOXO3O43524 673 aa13.43□□□□□ -0.26
CELF1-221ENST00000543178 CCDC61Q9Y6R9 512 aa13.43□□□□□ -0.26
CELF1-221ENST00000543178 SPATA31A6Q5VVP1 1343 aa13.42□□□□□ -0.26
CELF1-221ENST00000543178 DDX17Q92841 729 aaKnown RBP13.42□□□□□ -0.26
CELF1-221ENST00000543178 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
CELF1-221ENST00000543178 PLEKHG3A1L390 1219 aa13.41□□□□□ -0.26
CELF1-221ENST00000543178 COL22A1Q8NFW1 1626 aaPredicted RBP13.41□□□□□ -0.26
CELF1-221ENST00000543178 POLR3AO14802 1390 aaPredicted RBP13.41□□□□□ -0.26
CELF1-221ENST00000543178 MED1Q15648 1581 aaPredicted RBP13.41□□□□□ -0.26
CELF1-221ENST00000543178 PSME1Q06323 249 aa13.4□□□□□ -0.26
CELF1-221ENST00000543178 TESK2Q96S53 571 aa13.4□□□□□ -0.26
CELF1-221ENST00000543178 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
CELF1-221ENST00000543178 USP47Q96K76 1375 aa13.4□□□□□ -0.26
CELF1-221ENST00000543178 TRPM3Q9HCF6 1732 aaPredicted RBP13.39□□□□□ -0.27
CELF1-221ENST00000543178 ST20-MTHFSA0A0A6YYL1 179 aa13.39□□□□□ -0.27
CELF1-221ENST00000543178 SRPK2P78362 688 aaKnown RBP13.39□□□□□ -0.27
CELF1-221ENST00000543178 KRT28Q7Z3Y7 464 aa13.39□□□□□ -0.27
CELF1-221ENST00000543178 PNPLA6Q8IY17 1366 aa13.39□□□□□ -0.27
CELF1-221ENST00000543178 ATAD2Q6PL18 1390 aa13.38□□□□□ -0.27
CELF1-221ENST00000543178 PMFBP1Q8TBY8 1022 aa13.38□□□□□ -0.27
CELF1-221ENST00000543178 CABP2Q9NPB3 220 aa13.38□□□□□ -0.27
CELF1-221ENST00000543178 SPATA31A3Q5VYP0 1347 aa13.38□□□□□ -0.27
CELF1-221ENST00000543178 BRD4O60885 1362 aaPredicted RBP13.37□□□□□ -0.27
CELF1-221ENST00000543178 NGDNQ8NEJ9 315 aaKnown RBP13.37□□□□□ -0.27
CELF1-221ENST00000543178 PPIP5K1Q6PFW1 1433 aa13.37□□□□□ -0.27
CELF1-221ENST00000543178 ALS2Q96Q42 1657 aa13.37□□□□□ -0.27
CELF1-221ENST00000543178 TNS3Q68CZ2 1445 aa13.36□□□□□ -0.27
CELF1-221ENST00000543178 ACEP12821 1306 aa13.36□□□□□ -0.27
CELF1-221ENST00000543178 AKAP12Q02952 1782 aa13.35□□□□□ -0.27
CELF1-221ENST00000543178 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
CELF1-221ENST00000543178 XPCQ01831 940 aaPredicted RBP13.34□□□□□ -0.27
CELF1-221ENST00000543178 CABP1Q9NZU7 370 aa13.34□□□□□ -0.27
CELF1-221ENST00000543178 LRP6O75581 1613 aa13.34□□□□□ -0.27
CELF1-221ENST00000543178 TMF1P82094 1093 aa13.33□□□□□ -0.28
CELF1-221ENST00000543178 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
CELF1-221ENST00000543178 MARF1Q9Y4F3 1742 aaKnown RBP13.33□□□□□ -0.28
CELF1-221ENST00000543178 NINLQ9Y2I6 1382 aa13.32□□□□□ -0.28
CELF1-221ENST00000543178 CPSF1Q10570 1443 aaKnown RBP13.32□□□□□ -0.28
CELF1-221ENST00000543178 EIF4G2P78344 907 aaKnown RBP eCLIP13.32□□□□□ -0.28
CELF1-221ENST00000543178 SSH2Q76I76 1423 aa13.31□□□□□ -0.28
CELF1-221ENST00000543178 CDCA8Q53HL2 280 aa13.31□□□□□ -0.28
CELF1-221ENST00000543178 USP6P35125 1406 aa13.3□□□□□ -0.28
CELF1-221ENST00000543178 MON2Q7Z3U7 1717 aa13.3□□□□□ -0.28
CELF1-221ENST00000543178 ABCA3Q99758 1704 aa13.3□□□□□ -0.28
CELF1-221ENST00000543178 DISP3Q9P2K9 1392 aa13.3□□□□□ -0.28
CELF1-221ENST00000543178 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
CELF1-221ENST00000543178 CD163L1Q9NR16 1453 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms