RNA–Protein interactions for RNA: ENST00000543114.1

CACNA1C-230, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

TSL 4

Gene CACNA1C, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-230ENST00000543114 LRPPRCP42704 1394 aaKnown RBP29.23■■■□□ 2.27
CACNA1C-230ENST00000543114 STK26Q9P289 416 aa29.2■■■□□ 2.26
CACNA1C-230ENST00000543114 COL22A1Q8NFW1 1626 aaPredicted RBP29.2■■■□□ 2.26
CACNA1C-230ENST00000543114 PLEKHH1Q9ULM0 1364 aa29.19■■■□□ 2.26
CACNA1C-230ENST00000543114 C8orf37Q96NL8 207 aa29.19■■■□□ 2.26
CACNA1C-230ENST00000543114 CDK12Q9NYV4 1490 aaPredicted RBP29.18■■■□□ 2.26
CACNA1C-230ENST00000543114 ABCC11Q96J66 1382 aa29.18■■■□□ 2.26
CACNA1C-230ENST00000543114 TMEM132EQ6IEE7 984 aa29.18■■■□□ 2.26
CACNA1C-230ENST00000543114 NRXN1Q9ULB1 1477 aa29.17■■■□□ 2.26
CACNA1C-230ENST00000543114 RAB3GAP2Q9H2M9 1393 aa29.17■■■□□ 2.26
CACNA1C-230ENST00000543114 RXRBP28702 533 aa29.17■■■□□ 2.26
CACNA1C-230ENST00000543114 WAPLQ7Z5K2 1190 aa29.17■■■□□ 2.26
CACNA1C-230ENST00000543114 FMN2Q9NZ56 1722 aa29.17■■■□□ 2.26
CACNA1C-230ENST00000543114 MYOM2P54296 1465 aa29.17■■■□□ 2.26
CACNA1C-230ENST00000543114 PXDNQ92626 1479 aa29.17■■■□□ 2.26
CACNA1C-230ENST00000543114 YTHDC2Q9H6S0 1430 aaKnown RBP29.16■■■□□ 2.26
CACNA1C-230ENST00000543114 ACIN1Q9UKV3 1341 aaKnown RBP29.16■■■□□ 2.26
CACNA1C-230ENST00000543114 ADAMTS2O95450 1211 aa29.13■■■□□ 2.25
CACNA1C-230ENST00000543114 ESCO1Q5FWF5 840 aa29.13■■■□□ 2.25
CACNA1C-230ENST00000543114 NPHP3Q7Z494 1330 aa29.12■■■□□ 2.25
CACNA1C-230ENST00000543114 RGS12O14924 1447 aa29.11■■■□□ 2.25
CACNA1C-230ENST00000543114 NUTM2FA1L443 756 aa29.09■■■□□ 2.25
CACNA1C-230ENST00000543114 KIF1AQ12756 1690 aa29.09■■■□□ 2.25
CACNA1C-230ENST00000543114 UPF1Q92900 1129 aaKnown RBP eCLIP29.07■■■□□ 2.24
CACNA1C-230ENST00000543114 C14orf93Q9H972 538 aaKnown RBP29.07■■■□□ 2.24
CACNA1C-230ENST00000543114 MARF1Q9Y4F3 1742 aaKnown RBP29.07■■■□□ 2.24
CACNA1C-230ENST00000543114 XPCQ01831 940 aaPredicted RBP29.06■■■□□ 2.24
CACNA1C-230ENST00000543114 NGLY1Q96IV0 654 aa29.06■■■□□ 2.24
CACNA1C-230ENST00000543114 FOXO3O43524 673 aa29.05■■■□□ 2.24
CACNA1C-230ENST00000543114 QTRT2Q9H974 415 aaKnown RBP29.05■■■□□ 2.24
CACNA1C-230ENST00000543114 RGPD8O14715 1765 aaPredicted RBP29.05■■■□□ 2.24
CACNA1C-230ENST00000543114 CFAP70Q5T0N1 1121 aa29.04■■■□□ 2.24
CACNA1C-230ENST00000543114 RBM6P78332 1123 aaKnown RBP29.03■■■□□ 2.24
CACNA1C-230ENST00000543114 DHX57Q6P158 1386 aaKnown RBP29.01■■■□□ 2.23
CACNA1C-230ENST00000543114 SIRT1Q96EB6 747 aa29■■■□□ 2.23
CACNA1C-230ENST00000543114 ADGRB1O14514 1584 aa29■■■□□ 2.23
CACNA1C-230ENST00000543114 DLC1Q96QB1 1528 aa28.99■■■□□ 2.23
CACNA1C-230ENST00000543114 USP21Q9UK80 565 aa28.98■■■□□ 2.23
CACNA1C-230ENST00000543114 FNBP4Q8N3X1 1017 aaPredicted RBP28.97■■■□□ 2.23
CACNA1C-230ENST00000543114 ATRNO75882 1429 aa28.95■■■□□ 2.23
CACNA1C-230ENST00000543114 ADGRB2O60241 1585 aa28.95■■■□□ 2.22
CACNA1C-230ENST00000543114 PRAM1Q96QH2 718 aa28.94■■■□□ 2.22
CACNA1C-230ENST00000543114 USP32Q8NFA0 1604 aa28.94■■■□□ 2.22
CACNA1C-230ENST00000543114 SAFB2Q14151 953 aaKnown RBP eCLIP28.93■■■□□ 2.22
CACNA1C-230ENST00000543114 TRPC5Q9UL62 973 aaPredicted RBP28.93■■■□□ 2.22
CACNA1C-230ENST00000543114 SPATA31A3Q5VYP0 1347 aa28.93■■■□□ 2.22
CACNA1C-230ENST00000543114 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.91■■■□□ 2.22
CACNA1C-230ENST00000543114 BCL9LQ86UU0 1499 aa28.91■■■□□ 2.22
CACNA1C-230ENST00000543114 ABCA3Q99758 1704 aa28.89■■■□□ 2.21
CACNA1C-230ENST00000543114 TNS3Q68CZ2 1445 aa28.88■■■□□ 2.21
CACNA1C-230ENST00000543114 PHF8Q9UPP1 1060 aa28.88■■■□□ 2.21
CACNA1C-230ENST00000543114 KRT28Q7Z3Y7 464 aa28.87■■■□□ 2.21
CACNA1C-230ENST00000543114 ANKARQ7Z5J8 1434 aa28.86■■■□□ 2.21
CACNA1C-230ENST00000543114 POGKQ9P215 609 aa28.85■■■□□ 2.21
CACNA1C-230ENST00000543114 EP400Q96L91 3159 aa28.85■■■□□ 2.21
CACNA1C-230ENST00000543114 DCAF11Q8TEB1 546 aa28.84■■■□□ 2.21
CACNA1C-230ENST00000543114 KDM2AQ9Y2K7 1162 aa28.84■■■□□ 2.21
CACNA1C-230ENST00000543114 SLIT2O94813 1529 aa28.84■■■□□ 2.21
CACNA1C-230ENST00000543114 TRAK1Q9UPV9 953 aa28.83■■■□□ 2.21
CACNA1C-230ENST00000543114 ARHGEF28Q8N1W1 1705 aaKnown RBP28.83■■■□□ 2.21
CACNA1C-230ENST00000543114 HRCP23327 699 aa28.82■■■□□ 2.2
CACNA1C-230ENST00000543114 ATAD2Q6PL18 1390 aa28.82■■■□□ 2.2
CACNA1C-230ENST00000543114 TRPM3Q9HCF6 1732 aaPredicted RBP28.81■■■□□ 2.2
CACNA1C-230ENST00000543114 PLCH1Q4KWH8 1693 aa28.8■■■□□ 2.2
CACNA1C-230ENST00000543114 GLI3P10071 1580 aa28.8■■■□□ 2.2
CACNA1C-230ENST00000543114 SBNO1A3KN83 1393 aa28.8■■■□□ 2.2
CACNA1C-230ENST00000543114 TULP4Q9NRJ4 1543 aa28.79■■■□□ 2.2
CACNA1C-230ENST00000543114 HIRIP3Q9BW71 556 aaPredicted RBP28.79■■■□□ 2.2
CACNA1C-230ENST00000543114 MINK1Q8N4C8 1332 aaPredicted RBP28.77■■■□□ 2.2
CACNA1C-230ENST00000543114 PSME1Q06323 249 aa28.77■■■□□ 2.2
CACNA1C-230ENST00000543114 PMFBP1Q8TBY8 1022 aa28.77■■■□□ 2.2
CACNA1C-230ENST00000543114 RALGAPBQ86X10 1494 aa28.76■■■□□ 2.19
CACNA1C-230ENST00000543114 NWD2Q9ULI1 1742 aa28.75■■■□□ 2.19
CACNA1C-230ENST00000543114 ALS2Q96Q42 1657 aa28.75■■■□□ 2.19
CACNA1C-230ENST00000543114 CABLES1Q8TDN4 633 aa28.75■■■□□ 2.19
CACNA1C-230ENST00000543114 GJD4Q96KN9 370 aaPredicted RBP28.75■■■□□ 2.19
CACNA1C-230ENST00000543114 ARHGEF10O15013 1369 aa28.75■■■□□ 2.19
CACNA1C-230ENST00000543114 PRR36Q9H6K5 1346 aa28.74■■■□□ 2.19
CACNA1C-230ENST00000543114 UNC5CLQ8IV45 518 aa28.74■■■□□ 2.19
CACNA1C-230ENST00000543114 EIF3AQ14152 1382 aaKnown RBP28.74■■■□□ 2.19
CACNA1C-230ENST00000543114 PLEKHG5O94827 1062 aa28.73■■■□□ 2.19
CACNA1C-230ENST00000543114 STAC3Q96MF2 364 aa28.73■■■□□ 2.19
CACNA1C-230ENST00000543114 HAP1P54257 671 aaPredicted RBP28.72■■■□□ 2.19
CACNA1C-230ENST00000543114 LMOD2Q6P5Q4 547 aa28.71■■■□□ 2.19
CACNA1C-230ENST00000543114 ITSN1Q15811 1721 aa28.71■■■□□ 2.19
CACNA1C-230ENST00000543114 BRWD3Q6RI45 1802 aa28.69■■■□□ 2.18
CACNA1C-230ENST00000543114 KIAA1210Q9ULL0 1709 aa28.69■■■□□ 2.18
CACNA1C-230ENST00000543114 CRYBG1Q9Y4K1 1723 aa28.69■■■□□ 2.18
CACNA1C-230ENST00000543114 ATP7BP35670 1465 aa28.68■■■□□ 2.18
CACNA1C-230ENST00000543114 WASLO00401 505 aaPredicted RBP28.68■■■□□ 2.18
CACNA1C-230ENST00000543114 NRAPQ86VF7 1730 aa28.66■■■□□ 2.18
CACNA1C-230ENST00000543114 GPRASP1Q5JY77 1395 aa28.65■■■□□ 2.18
CACNA1C-230ENST00000543114 TOPAZ1Q8N9V7 1692 aa28.63■■■□□ 2.17
CACNA1C-230ENST00000543114 VPS72Q15906 364 aa28.61■■■□□ 2.17
CACNA1C-230ENST00000543114 COL14A1Q05707 1796 aaKnown RBP28.6■■■□□ 2.17
CACNA1C-230ENST00000543114 FAM83GA6ND36 823 aa28.58■■■□□ 2.17
CACNA1C-230ENST00000543114 NGDNQ8NEJ9 315 aaKnown RBP28.57■■■□□ 2.16
CACNA1C-230ENST00000543114 SRCAPQ6ZRS2 3230 aa28.57■■■□□ 2.16
CACNA1C-230ENST00000543114 PHRF1Q9P1Y6 1649 aaKnown RBP28.55■■■□□ 2.16
CACNA1C-230ENST00000543114 SEPT12Q8IYM1 358 aa28.54■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms