RNA–Protein interactions for RNA: ENST00000543079.1

PAAF1-212, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 390 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-212ENST00000543079 PUS10Q3MIT2 529 aaKnown RBP11.98□□□□□ -0.49
PAAF1-212ENST00000543079 TLL1O43897 1013 aa11.97□□□□□ -0.49
PAAF1-212ENST00000543079 ABCC8Q09428 1581 aa11.96□□□□□ -0.49
PAAF1-212ENST00000543079 ADH1BP00325 375 aa11.95□□□□□ -0.5
PAAF1-212ENST00000543079 ATP6V1AP38606 617 aa11.95□□□□□ -0.5
PAAF1-212ENST00000543079 FUT2Q10981 343 aa11.95□□□□□ -0.5
PAAF1-212ENST00000543079 CCDC102AQ96A19 550 aa11.95□□□□□ -0.5
PAAF1-212ENST00000543079 TARBP1Q13395 1621 aaKnown RBP11.95□□□□□ -0.5
PAAF1-212ENST00000543079 RNF223E7ERA6 249 aa11.94□□□□□ -0.5
PAAF1-212ENST00000543079 MORN1Q5T089 497 aa11.94□□□□□ -0.5
PAAF1-212ENST00000543079 SNAPC4Q5SXM2 1469 aa11.94□□□□□ -0.5
PAAF1-212ENST00000543079 RAD54L2Q9Y4B4 1467 aa11.92□□□□□ -0.5
PAAF1-212ENST00000543079 CD46P15529 392 aa11.92□□□□□ -0.5
PAAF1-212ENST00000543079 SYNJ1O43426 1573 aa11.92□□□□□ -0.5
PAAF1-212ENST00000543079 S1PR4O95977 384 aa11.91□□□□□ -0.5
PAAF1-212ENST00000543079 MDM2Q00987 491 aaPredicted RBP11.91□□□□□ -0.5
PAAF1-212ENST00000543079 SOGA1O94964 1423 aa11.9□□□□□ -0.5
PAAF1-212ENST00000543079 LAPTM4AQ15012 233 aa11.9□□□□□ -0.5
PAAF1-212ENST00000543079 DNMBPQ6XZF7 1577 aa11.9□□□□□ -0.5
PAAF1-212ENST00000543079 ANKLE1Q8NAG6 615 aa11.9□□□□□ -0.5
PAAF1-212ENST00000543079 SPSB2Q99619 263 aa11.9□□□□□ -0.5
PAAF1-212ENST00000543079 SLC6A16Q9GZN6 736 aa11.9□□□□□ -0.5
PAAF1-212ENST00000543079 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
PAAF1-212ENST00000543079 ZMYND10O75800 440 aa11.89□□□□□ -0.51
PAAF1-212ENST00000543079 BARGINQ6ZT62 677 aa11.89□□□□□ -0.51
PAAF1-212ENST00000543079 SLC27A5Q9Y2P5 690 aa11.89□□□□□ -0.51
PAAF1-212ENST00000543079 GRIPAP1Q4V328 841 aa11.88□□□□□ -0.51
PAAF1-212ENST00000543079 ZC3H15Q8WU90 426 aaKnown RBP11.88□□□□□ -0.51
PAAF1-212ENST00000543079 THAP11Q96EK4 314 aa11.88□□□□□ -0.51
PAAF1-212ENST00000543079 SALL2Q9Y467 1007 aaPredicted RBP11.88□□□□□ -0.51
PAAF1-212ENST00000543079 PPEF1O14829 653 aaPredicted RBP11.87□□□□□ -0.51
PAAF1-212ENST00000543079 CLCN1P35523 988 aa11.87□□□□□ -0.51
PAAF1-212ENST00000543079 FAM69CQ0P6D2 419 aa11.87□□□□□ -0.51
PAAF1-212ENST00000543079 KRI1Q8N9T8 703 aaKnown RBP11.87□□□□□ -0.51
PAAF1-212ENST00000543079 GPCPD1Q9NPB8 672 aa11.87□□□□□ -0.51
PAAF1-212ENST00000543079 GFRA3O60609 400 aa11.86□□□□□ -0.51
PAAF1-212ENST00000543079 FMNL1O95466 1100 aaPredicted RBP11.86□□□□□ -0.51
PAAF1-212ENST00000543079 SLC19A1P41440 591 aa11.86□□□□□ -0.51
PAAF1-212ENST00000543079 EMID1Q96A84 441 aaPredicted RBP11.85□□□□□ -0.51
PAAF1-212ENST00000543079 SYNJ2O15056 1496 aa11.84□□□□□ -0.51
PAAF1-212ENST00000543079 KDM4AO75164 1064 aa11.84□□□□□ -0.51
PAAF1-212ENST00000543079 MAGI1Q96QZ7 1491 aaPredicted RBP11.83□□□□□ -0.52
PAAF1-212ENST00000543079 BRICD5Q6PL45 260 aa11.83□□□□□ -0.52
PAAF1-212ENST00000543079 FAM217BQ9NTX9 383 aaPredicted RBP11.83□□□□□ -0.52
PAAF1-212ENST00000543079 ERCC6L2Q5T890 1561 aa11.83□□□□□ -0.52
PAAF1-212ENST00000543079 Q6ZNB5 142 aa11.82□□□□□ -0.52
PAAF1-212ENST00000543079 FBXO41Q8TF61 875 aa11.82□□□□□ -0.52
PAAF1-212ENST00000543079 PRDM2Q13029 1718 aa11.82□□□□□ -0.52
PAAF1-212ENST00000543079 NRG2O14511 850 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-212ENST00000543079 USP46P62068 366 aa11.81□□□□□ -0.52
PAAF1-212ENST00000543079 FAM160A2Q8N612 972 aaPredicted RBP11.81□□□□□ -0.52
PAAF1-212ENST00000543079 GRIN2BQ13224 1484 aa11.81□□□□□ -0.52
PAAF1-212ENST00000543079 SPRYD7Q5W111 196 aa11.8□□□□□ -0.52
PAAF1-212ENST00000543079 LIAT1Q6ZQX7 453 aa11.8□□□□□ -0.52
PAAF1-212ENST00000543079 Q3C1V9 767 aa11.79□□□□□ -0.52
PAAF1-212ENST00000543079 RNF19BQ6ZMZ0 732 aa11.78□□□□□ -0.52
PAAF1-212ENST00000543079 ZNF598Q86UK7 904 aaKnown RBP11.78□□□□□ -0.52
PAAF1-212ENST00000543079 REPIN1Q9BWE0 567 aaKnown RBP11.78□□□□□ -0.52
PAAF1-212ENST00000543079 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
PAAF1-212ENST00000543079 KIF13AQ9H1H9 1805 aa11.77□□□□□ -0.52
PAAF1-212ENST00000543079 PLA2G2CQ5R387 149 aa11.77□□□□□ -0.53
PAAF1-212ENST00000543079 AMHR2Q16671 573 aa11.76□□□□□ -0.53
PAAF1-212ENST00000543079 MSS51Q4VC12 460 aa11.76□□□□□ -0.53
PAAF1-212ENST00000543079 SSTR3P32745 418 aaPredicted RBP11.75□□□□□ -0.53
PAAF1-212ENST00000543079 HOXA2O43364 376 aa11.74□□□□□ -0.53
PAAF1-212ENST00000543079 TRIM67Q6ZTA4 783 aa11.74□□□□□ -0.53
PAAF1-212ENST00000543079 ABCC10Q5T3U5 1492 aa11.74□□□□□ -0.53
PAAF1-212ENST00000543079 FGD5Q6ZNL6 1462 aa11.73□□□□□ -0.53
PAAF1-212ENST00000543079 NUTM1Q86Y26 1132 aa11.73□□□□□ -0.53
PAAF1-212ENST00000543079 PRDM9Q9NQV7 894 aa11.73□□□□□ -0.53
PAAF1-212ENST00000543079 FCF1Q9Y324 198 aaKnown RBP11.73□□□□□ -0.53
PAAF1-212ENST00000543079 ZNF697Q5TEC3 545 aa11.72□□□□□ -0.53
PAAF1-212ENST00000543079 HLA-CQ95604 372 aa11.72□□□□□ -0.53
PAAF1-212ENST00000543079 RPIAP49247 311 aa11.71□□□□□ -0.53
PAAF1-212ENST00000543079 TTLL12Q14166 644 aaPredicted RBP11.71□□□□□ -0.53
PAAF1-212ENST00000543079 TRAF7Q6Q0C0 670 aa11.71□□□□□ -0.53
PAAF1-212ENST00000543079 USB1Q9BQ65 265 aaKnown RBP11.71□□□□□ -0.53
PAAF1-212ENST00000543079 WDR97A6NE52 1622 aa11.71□□□□□ -0.54
PAAF1-212ENST00000543079 HECW2Q9P2P5 1572 aa11.71□□□□□ -0.54
PAAF1-212ENST00000543079 PRR20EP86478 221 aa11.7□□□□□ -0.54
PAAF1-212ENST00000543079 PRR20CP86479 221 aa11.7□□□□□ -0.54
PAAF1-212ENST00000543079 PRR20DP86480 221 aa11.7□□□□□ -0.54
PAAF1-212ENST00000543079 PRR20BP86481 221 aa11.7□□□□□ -0.54
PAAF1-212ENST00000543079 PRR20AP86496 221 aa11.7□□□□□ -0.54
PAAF1-212ENST00000543079 AK7Q96M32 723 aa11.7□□□□□ -0.54
PAAF1-212ENST00000543079 KDM6BO15054 1643 aa11.7□□□□□ -0.54
PAAF1-212ENST00000543079 CEP170Q5SW79 1584 aa11.7□□□□□ -0.54
PAAF1-212ENST00000543079 MMP16P51512 607 aa11.69□□□□□ -0.54
PAAF1-212ENST00000543079 ADGRL1O94910 1474 aa11.69□□□□□ -0.54
PAAF1-212ENST00000543079 LCE2BO14633 110 aa11.68□□□□□ -0.54
PAAF1-212ENST00000543079 TRIM66O15016 1216 aa11.68□□□□□ -0.54
PAAF1-212ENST00000543079 GIGYF2Q6Y7W6 1299 aaKnown RBP11.68□□□□□ -0.54
PAAF1-212ENST00000543079 GDF9O60383 454 aa11.67□□□□□ -0.54
PAAF1-212ENST00000543079 GUCA2AQ02747 115 aa11.67□□□□□ -0.54
PAAF1-212ENST00000543079 LMTK3Q96Q04 1460 aa11.66□□□□□ -0.54
PAAF1-212ENST00000543079 CD2BP2O95400 341 aaKnown RBP11.66□□□□□ -0.54
PAAF1-212ENST00000543079 SPIRE2Q8WWL2 714 aa11.66□□□□□ -0.54
PAAF1-212ENST00000543079 DXOO77932 396 aaKnown RBP11.65□□□□□ -0.54
PAAF1-212ENST00000543079 NUP160Q12769 1436 aa11.64□□□□□ -0.55
PAAF1-212ENST00000543079 FDX1P10109 184 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms