RNA–Protein interactions for RNA: ENST00000542293.5

PAAF1-211, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-211ENST00000542293 HRCP23327 699 aa24.46■■□□□ 1.51
PAAF1-211ENST00000542293 SF3B2Q13435 895 aaKnown RBP24.46■■□□□ 1.51
PAAF1-211ENST00000542293 PXDNQ92626 1479 aa24.45■■□□□ 1.5
PAAF1-211ENST00000542293 ZNF326Q5BKZ1 582 aaKnown RBP24.43■■□□□ 1.5
PAAF1-211ENST00000542293 UNC5CLQ8IV45 518 aa24.43■■□□□ 1.5
PAAF1-211ENST00000542293 SLIT2O94813 1529 aa24.43■■□□□ 1.5
PAAF1-211ENST00000542293 ROBO2Q9HCK4 1378 aa24.42■■□□□ 1.5
PAAF1-211ENST00000542293 NEXMIFQ5QGS0 1516 aa24.4■■□□□ 1.5
PAAF1-211ENST00000542293 NPHP3Q7Z494 1330 aa24.4■■□□□ 1.5
PAAF1-211ENST00000542293 FAM50AQ14320 339 aaKnown RBP24.4■■□□□ 1.5
PAAF1-211ENST00000542293 SEPT12Q8IYM1 358 aa24.39■■□□□ 1.49
PAAF1-211ENST00000542293 XPCQ01831 940 aaPredicted RBP24.38■■□□□ 1.49
PAAF1-211ENST00000542293 APLP2Q06481 763 aa24.36■■□□□ 1.49
PAAF1-211ENST00000542293 NUP155O75694 1391 aa24.35■■□□□ 1.49
PAAF1-211ENST00000542293 LOC105371045A0A1W2PR82 267 aa24.35■■□□□ 1.49
PAAF1-211ENST00000542293 ESCO1Q5FWF5 840 aa24.35■■□□□ 1.49
PAAF1-211ENST00000542293 FOXO3O43524 673 aa24.33■■□□□ 1.49
PAAF1-211ENST00000542293 PRAG1Q86YV5 1406 aa24.33■■□□□ 1.49
PAAF1-211ENST00000542293 BAG6P46379 1132 aa24.31■■□□□ 1.48
PAAF1-211ENST00000542293 KRT27Q7Z3Y8 459 aa24.31■■□□□ 1.48
PAAF1-211ENST00000542293 USP32Q8NFA0 1604 aa24.31■■□□□ 1.48
PAAF1-211ENST00000542293 CDC42BPGQ6DT37 1551 aa24.3■■□□□ 1.48
PAAF1-211ENST00000542293 ONECUT3O60422 494 aaPredicted RBP24.3■■□□□ 1.48
PAAF1-211ENST00000542293 HFM1A2PYH4 1435 aa24.29■■□□□ 1.48
PAAF1-211ENST00000542293 CLTCL1P53675 1640 aa24.29■■□□□ 1.48
PAAF1-211ENST00000542293 VPS72Q15906 364 aa24.28■■□□□ 1.48
PAAF1-211ENST00000542293 YY1P25490 414 aa24.26■■□□□ 1.47
PAAF1-211ENST00000542293 R3HDM1Q15032 1099 aaKnown RBP24.26■■□□□ 1.47
PAAF1-211ENST00000542293 PLCH1Q4KWH8 1693 aa24.26■■□□□ 1.47
PAAF1-211ENST00000542293 EN1Q05925 392 aaPredicted RBP24.25■■□□□ 1.47
PAAF1-211ENST00000542293 ROCK1Q13464 1354 aa24.25■■□□□ 1.47
PAAF1-211ENST00000542293 SPATA31A3Q5VYP0 1347 aa24.24■■□□□ 1.47
PAAF1-211ENST00000542293 LRPPRCP42704 1394 aaKnown RBP24.24■■□□□ 1.47
PAAF1-211ENST00000542293 NWD2Q9ULI1 1742 aa24.24■■□□□ 1.47
PAAF1-211ENST00000542293 KIF1BO60333 1816 aa24.23■■□□□ 1.47
PAAF1-211ENST00000542293 CCDC9Q9Y3X0 531 aaKnown RBP24.22■■□□□ 1.47
PAAF1-211ENST00000542293 RGPD1P0DJD0 1748 aa24.21■■□□□ 1.47
PAAF1-211ENST00000542293 NUTM2FA1L443 756 aa24.2■■□□□ 1.46
PAAF1-211ENST00000542293 NAIPQ13075 1403 aa24.18■■□□□ 1.46
PAAF1-211ENST00000542293 VGFO15240 615 aaPredicted RBP24.17■■□□□ 1.46
PAAF1-211ENST00000542293 CABLES1Q8TDN4 633 aa24.16■■□□□ 1.46
PAAF1-211ENST00000542293 TNS1Q9HBL0 1735 aaKnown RBP24.15■■□□□ 1.46
PAAF1-211ENST00000542293 A0A0G2JS52 829 aa24.15■■□□□ 1.46
PAAF1-211ENST00000542293 MYT1Q01538 1121 aa24.15■■□□□ 1.46
PAAF1-211ENST00000542293 ABCA3Q99758 1704 aa24.15■■□□□ 1.46
PAAF1-211ENST00000542293 CCDC144AA2RUR9 1427 aa24.14■■□□□ 1.45
PAAF1-211ENST00000542293 KIF1AQ12756 1690 aa24.14■■□□□ 1.45
PAAF1-211ENST00000542293 DISP2A7MBM2 1401 aa24.13■■□□□ 1.45
PAAF1-211ENST00000542293 HAP1P54257 671 aaPredicted RBP24.13■■□□□ 1.45
PAAF1-211ENST00000542293 FAM98CQ17RN3 349 aaKnown RBP24.13■■□□□ 1.45
PAAF1-211ENST00000542293 FAM182BQ5T319 152 aa24.13■■□□□ 1.45
PAAF1-211ENST00000542293 KRT28Q7Z3Y7 464 aa24.13■■□□□ 1.45
PAAF1-211ENST00000542293 NRAPQ86VF7 1730 aa24.13■■□□□ 1.45
PAAF1-211ENST00000542293 FMN2Q9NZ56 1722 aa24.12■■□□□ 1.45
PAAF1-211ENST00000542293 TNS3Q68CZ2 1445 aa24.11■■□□□ 1.45
PAAF1-211ENST00000542293 PLEKHG5O94827 1062 aa24.11■■□□□ 1.45
PAAF1-211ENST00000542293 EZH2Q15910 746 aaKnown RBP24.11■■□□□ 1.45
PAAF1-211ENST00000542293 WAPLQ7Z5K2 1190 aa24.1■■□□□ 1.45
PAAF1-211ENST00000542293 PPLO60437 1756 aa24.1■■□□□ 1.45
PAAF1-211ENST00000542293 FAM83GA6ND36 823 aa24.09■■□□□ 1.45
PAAF1-211ENST00000542293 RGPD8O14715 1765 aaPredicted RBP24.06■■□□□ 1.44
PAAF1-211ENST00000542293 PLEKHH1Q9ULM0 1364 aa24.05■■□□□ 1.44
PAAF1-211ENST00000542293 CAMKK2Q96RR4 588 aa24.05■■□□□ 1.44
PAAF1-211ENST00000542293 RPGRIP1LQ68CZ1 1315 aa24.05■■□□□ 1.44
PAAF1-211ENST00000542293 TECPR2O15040 1411 aa24.04■■□□□ 1.44
PAAF1-211ENST00000542293 STK26Q9P289 416 aa24.03■■□□□ 1.44
PAAF1-211ENST00000542293 THSD7AQ9UPZ6 1657 aa24.02■■□□□ 1.44
PAAF1-211ENST00000542293 ITGAEP38570 1179 aa24.01■■□□□ 1.43
PAAF1-211ENST00000542293 ADGRB2O60241 1585 aa24■■□□□ 1.43
PAAF1-211ENST00000542293 PSME1Q06323 249 aa24■■□□□ 1.43
PAAF1-211ENST00000542293 BTG4Q9NY30 223 aa24■■□□□ 1.43
PAAF1-211ENST00000542293 SBNO1A3KN83 1393 aa24■■□□□ 1.43
PAAF1-211ENST00000542293 KNDC1Q76NI1 1749 aa23.99■■□□□ 1.43
PAAF1-211ENST00000542293 LMOD2Q6P5Q4 547 aa23.99■■□□□ 1.43
PAAF1-211ENST00000542293 PHF8Q9UPP1 1060 aa23.99■■□□□ 1.43
PAAF1-211ENST00000542293 RREB1Q92766 1687 aa23.99■■□□□ 1.43
PAAF1-211ENST00000542293 IFT172Q9UG01 1749 aa23.98■■□□□ 1.43
PAAF1-211ENST00000542293 ARHGEF10O15013 1369 aa23.97■■□□□ 1.43
PAAF1-211ENST00000542293 TRIM37O94972 964 aa23.97■■□□□ 1.43
PAAF1-211ENST00000542293 NUP188Q5SRE5 1749 aa23.97■■□□□ 1.43
PAAF1-211ENST00000542293 SPATA31A5Q5VU36 1347 aa23.97■■□□□ 1.43
PAAF1-211ENST00000542293 SPATA31A7Q8IWB4 1347 aa23.97■■□□□ 1.43
PAAF1-211ENST00000542293 COL14A1Q05707 1796 aaKnown RBP23.96■■□□□ 1.43
PAAF1-211ENST00000542293 NRXN1Q9ULB1 1477 aa23.95■■□□□ 1.42
PAAF1-211ENST00000542293 ABCC11Q96J66 1382 aa23.95■■□□□ 1.42
PAAF1-211ENST00000542293 ADGRF5Q8IZF2 1346 aa23.95■■□□□ 1.42
PAAF1-211ENST00000542293 CAMTA1Q9Y6Y1 1673 aa23.95■■□□□ 1.42
PAAF1-211ENST00000542293 PARD3Q8TEW0 1356 aa23.94■■□□□ 1.42
PAAF1-211ENST00000542293 APBA3O96018 575 aa23.92■■□□□ 1.42
PAAF1-211ENST00000542293 TMEM132EQ6IEE7 984 aa23.92■■□□□ 1.42
PAAF1-211ENST00000542293 PPP1R1BQ9UD71 204 aaPredicted RBP23.91■■□□□ 1.42
PAAF1-211ENST00000542293 NINLQ9Y2I6 1382 aa23.91■■□□□ 1.42
PAAF1-211ENST00000542293 DCAF8L1A6NGE4 600 aa23.9■■□□□ 1.42
PAAF1-211ENST00000542293 FAM196AQ6ZSG2 479 aa23.9■■□□□ 1.42
PAAF1-211ENST00000542293 TRPM3Q9HCF6 1732 aaPredicted RBP23.9■■□□□ 1.42
PAAF1-211ENST00000542293 SPON1Q9HCB6 807 aa23.89■■□□□ 1.41
PAAF1-211ENST00000542293 RRBP1Q9P2E9 1410 aaKnown RBP23.88■■□□□ 1.41
PAAF1-211ENST00000542293 IFFO2Q5TF58 517 aa23.88■■□□□ 1.41
PAAF1-211ENST00000542293 ALS2Q96Q42 1657 aa23.87■■□□□ 1.41
PAAF1-211ENST00000542293 KCNQ2O43526 872 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms