RNA–Protein interactions for RNA: ENST00000542260.1

SCNN1A-217, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 4

Gene SCNN1A, Length 601 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-217ENST00000542260 SOS2Q07890 1332 aaPredicted RBP22.94■■□□□ 1.26
SCNN1A-217ENST00000542260 ORAI2Q96SN7 254 aa22.94■■□□□ 1.26
SCNN1A-217ENST00000542260 C8orf37Q96NL8 207 aa22.93■■□□□ 1.26
SCNN1A-217ENST00000542260 PIK3C2GO75747 1445 aa22.92■■□□□ 1.26
SCNN1A-217ENST00000542260 LRPPRCP42704 1394 aaKnown RBP22.91■■□□□ 1.26
SCNN1A-217ENST00000542260 COL22A1Q8NFW1 1626 aaPredicted RBP22.91■■□□□ 1.26
SCNN1A-217ENST00000542260 NPHP3Q7Z494 1330 aa22.89■■□□□ 1.26
SCNN1A-217ENST00000542260 ABCC11Q96J66 1382 aa22.89■■□□□ 1.25
SCNN1A-217ENST00000542260 STK26Q9P289 416 aa22.88■■□□□ 1.25
SCNN1A-217ENST00000542260 ESCO1Q5FWF5 840 aa22.87■■□□□ 1.25
SCNN1A-217ENST00000542260 ADAMTS2O95450 1211 aa22.86■■□□□ 1.25
SCNN1A-217ENST00000542260 NGLY1Q96IV0 654 aa22.86■■□□□ 1.25
SCNN1A-217ENST00000542260 FMN2Q9NZ56 1722 aa22.85■■□□□ 1.25
SCNN1A-217ENST00000542260 YTHDC2Q9H6S0 1430 aaKnown RBP22.85■■□□□ 1.25
SCNN1A-217ENST00000542260 MYOM2P54296 1465 aa22.85■■□□□ 1.25
SCNN1A-217ENST00000542260 KIF1AQ12756 1690 aa22.84■■□□□ 1.25
SCNN1A-217ENST00000542260 RBM6P78332 1123 aaKnown RBP22.84■■□□□ 1.25
SCNN1A-217ENST00000542260 UPF1Q92900 1129 aaKnown RBP eCLIP22.84■■□□□ 1.25
SCNN1A-217ENST00000542260 QTRT2Q9H974 415 aaKnown RBP22.84■■□□□ 1.25
SCNN1A-217ENST00000542260 TMEM132EQ6IEE7 984 aa22.83■■□□□ 1.25
SCNN1A-217ENST00000542260 WAPLQ7Z5K2 1190 aa22.83■■□□□ 1.25
SCNN1A-217ENST00000542260 PXDNQ92626 1479 aa22.83■■□□□ 1.25
SCNN1A-217ENST00000542260 MARF1Q9Y4F3 1742 aaKnown RBP22.82■■□□□ 1.24
SCNN1A-217ENST00000542260 RGS12O14924 1447 aa22.82■■□□□ 1.24
SCNN1A-217ENST00000542260 NRXN1Q9ULB1 1477 aa22.81■■□□□ 1.24
SCNN1A-217ENST00000542260 RAB3GAP2Q9H2M9 1393 aa22.8■■□□□ 1.24
SCNN1A-217ENST00000542260 PLEKHH1Q9ULM0 1364 aa22.79■■□□□ 1.24
SCNN1A-217ENST00000542260 SIRT1Q96EB6 747 aa22.79■■□□□ 1.24
SCNN1A-217ENST00000542260 USP21Q9UK80 565 aa22.79■■□□□ 1.24
SCNN1A-217ENST00000542260 DHX57Q6P158 1386 aaKnown RBP22.78■■□□□ 1.24
SCNN1A-217ENST00000542260 NUTM2FA1L443 756 aa22.78■■□□□ 1.24
SCNN1A-217ENST00000542260 FOXO3O43524 673 aa22.78■■□□□ 1.24
SCNN1A-217ENST00000542260 C14orf93Q9H972 538 aaKnown RBP22.78■■□□□ 1.24
SCNN1A-217ENST00000542260 TRPC5Q9UL62 973 aaPredicted RBP22.77■■□□□ 1.24
SCNN1A-217ENST00000542260 FNBP4Q8N3X1 1017 aaPredicted RBP22.76■■□□□ 1.23
SCNN1A-217ENST00000542260 XPCQ01831 940 aaPredicted RBP22.74■■□□□ 1.23
SCNN1A-217ENST00000542260 DLC1Q96QB1 1528 aa22.73■■□□□ 1.23
SCNN1A-217ENST00000542260 CFAP70Q5T0N1 1121 aa22.73■■□□□ 1.23
SCNN1A-217ENST00000542260 RGPD8O14715 1765 aaPredicted RBP22.73■■□□□ 1.23
SCNN1A-217ENST00000542260 ATRNO75882 1429 aa22.72■■□□□ 1.23
SCNN1A-217ENST00000542260 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.71■■□□□ 1.23
SCNN1A-217ENST00000542260 ATAD2Q6PL18 1390 aa22.69■■□□□ 1.22
SCNN1A-217ENST00000542260 SPATA31A3Q5VYP0 1347 aa22.69■■□□□ 1.22
SCNN1A-217ENST00000542260 ADGRB2O60241 1585 aa22.68■■□□□ 1.22
SCNN1A-217ENST00000542260 PRAM1Q96QH2 718 aa22.68■■□□□ 1.22
SCNN1A-217ENST00000542260 PSME1Q06323 249 aa22.67■■□□□ 1.22
SCNN1A-217ENST00000542260 KRT28Q7Z3Y7 464 aa22.67■■□□□ 1.22
SCNN1A-217ENST00000542260 PHF8Q9UPP1 1060 aa22.67■■□□□ 1.22
SCNN1A-217ENST00000542260 USP32Q8NFA0 1604 aa22.67■■□□□ 1.22
SCNN1A-217ENST00000542260 BCL9LQ86UU0 1499 aa22.66■■□□□ 1.22
SCNN1A-217ENST00000542260 TNS3Q68CZ2 1445 aa22.66■■□□□ 1.22
SCNN1A-217ENST00000542260 POGKQ9P215 609 aa22.66■■□□□ 1.22
SCNN1A-217ENST00000542260 ADGRB1O14514 1584 aa22.66■■□□□ 1.22
SCNN1A-217ENST00000542260 ANKARQ7Z5J8 1434 aa22.65■■□□□ 1.22
SCNN1A-217ENST00000542260 SAFB2Q14151 953 aaKnown RBP eCLIP22.64■■□□□ 1.21
SCNN1A-217ENST00000542260 STAC3Q96MF2 364 aa22.64■■□□□ 1.21
SCNN1A-217ENST00000542260 HAP1P54257 671 aaPredicted RBP22.63■■□□□ 1.21
SCNN1A-217ENST00000542260 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
SCNN1A-217ENST00000542260 HRCP23327 699 aa22.62■■□□□ 1.21
SCNN1A-217ENST00000542260 SBNO1A3KN83 1393 aa22.62■■□□□ 1.21
SCNN1A-217ENST00000542260 ABCA3Q99758 1704 aa22.61■■□□□ 1.21
SCNN1A-217ENST00000542260 SLIT2O94813 1529 aa22.61■■□□□ 1.21
SCNN1A-217ENST00000542260 ARHGEF10O15013 1369 aa22.61■■□□□ 1.21
SCNN1A-217ENST00000542260 DCAF11Q8TEB1 546 aa22.6■■□□□ 1.21
SCNN1A-217ENST00000542260 GJD4Q96KN9 370 aaPredicted RBP22.6■■□□□ 1.21
SCNN1A-217ENST00000542260 UNC5CLQ8IV45 518 aa22.59■■□□□ 1.21
SCNN1A-217ENST00000542260 TRAK1Q9UPV9 953 aa22.59■■□□□ 1.21
SCNN1A-217ENST00000542260 EP400Q96L91 3159 aa22.58■■□□□ 1.21
SCNN1A-217ENST00000542260 NWD2Q9ULI1 1742 aa22.58■■□□□ 1.21
SCNN1A-217ENST00000542260 KDM2AQ9Y2K7 1162 aa22.58■■□□□ 1.21
SCNN1A-217ENST00000542260 PLCH1Q4KWH8 1693 aa22.58■■□□□ 1.2
SCNN1A-217ENST00000542260 TULP4Q9NRJ4 1543 aa22.57■■□□□ 1.2
SCNN1A-217ENST00000542260 LMOD2Q6P5Q4 547 aa22.56■■□□□ 1.2
SCNN1A-217ENST00000542260 GLI3P10071 1580 aa22.55■■□□□ 1.2
SCNN1A-217ENST00000542260 RALGAPBQ86X10 1494 aa22.55■■□□□ 1.2
SCNN1A-217ENST00000542260 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
SCNN1A-217ENST00000542260 ITSN1Q15811 1721 aa22.54■■□□□ 1.2
SCNN1A-217ENST00000542260 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
SCNN1A-217ENST00000542260 TRPM3Q9HCF6 1732 aaPredicted RBP22.54■■□□□ 1.2
SCNN1A-217ENST00000542260 GPRASP1Q5JY77 1395 aa22.53■■□□□ 1.2
SCNN1A-217ENST00000542260 CCDC125Q86Z20 511 aa22.53■■□□□ 1.2
SCNN1A-217ENST00000542260 HIRIP3Q9BW71 556 aaPredicted RBP22.53■■□□□ 1.2
SCNN1A-217ENST00000542260 MINK1Q8N4C8 1332 aaPredicted RBP22.53■■□□□ 1.2
SCNN1A-217ENST00000542260 ALS2Q96Q42 1657 aa22.52■■□□□ 1.2
SCNN1A-217ENST00000542260 CABLES1Q8TDN4 633 aa22.51■■□□□ 1.19
SCNN1A-217ENST00000542260 WASLO00401 505 aaPredicted RBP22.5■■□□□ 1.19
SCNN1A-217ENST00000542260 KIAA1210Q9ULL0 1709 aa22.49■■□□□ 1.19
SCNN1A-217ENST00000542260 PLEKHG5O94827 1062 aa22.49■■□□□ 1.19
SCNN1A-217ENST00000542260 VPS72Q15906 364 aa22.48■■□□□ 1.19
SCNN1A-217ENST00000542260 BRWD3Q6RI45 1802 aa22.47■■□□□ 1.19
SCNN1A-217ENST00000542260 PRR36Q9H6K5 1346 aa22.47■■□□□ 1.19
SCNN1A-217ENST00000542260 COL14A1Q05707 1796 aaKnown RBP22.46■■□□□ 1.19
SCNN1A-217ENST00000542260 CCDC9Q9Y3X0 531 aaKnown RBP22.46■■□□□ 1.19
SCNN1A-217ENST00000542260 NRAPQ86VF7 1730 aa22.45■■□□□ 1.19
SCNN1A-217ENST00000542260 NGDNQ8NEJ9 315 aaKnown RBP22.45■■□□□ 1.18
SCNN1A-217ENST00000542260 ATP7BP35670 1465 aa22.44■■□□□ 1.18
SCNN1A-217ENST00000542260 CRYBG1Q9Y4K1 1723 aa22.43■■□□□ 1.18
SCNN1A-217ENST00000542260 BLMP54132 1417 aaPredicted RBP22.43■■□□□ 1.18
SCNN1A-217ENST00000542260 ZRANB1Q9UGI0 708 aa22.42■■□□□ 1.18
SCNN1A-217ENST00000542260 SEPT12Q8IYM1 358 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms