RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 SOS2Q07890 1332 aaPredicted RBP29.59■■■□□ 2.33
DDX11-220ENST00000542244 NUTM2FA1L443 756 aa29.58■■■□□ 2.33
DDX11-220ENST00000542244 LRPPRCP42704 1394 aaKnown RBP29.58■■■□□ 2.33
DDX11-220ENST00000542244 RAB3GAP2Q9H2M9 1393 aa29.58■■■□□ 2.33
DDX11-220ENST00000542244 C8orf37Q96NL8 207 aa29.57■■■□□ 2.32
DDX11-220ENST00000542244 TECPR2O15040 1411 aa29.56■■■□□ 2.32
DDX11-220ENST00000542244 CDC42BPGQ6DT37 1551 aa29.55■■■□□ 2.32
DDX11-220ENST00000542244 ADAMTS2O95450 1211 aa29.54■■■□□ 2.32
DDX11-220ENST00000542244 ABCC11Q96J66 1382 aa29.53■■■□□ 2.32
DDX11-220ENST00000542244 XPCQ01831 940 aaPredicted RBP29.53■■■□□ 2.32
DDX11-220ENST00000542244 ESCO1Q5FWF5 840 aa29.53■■■□□ 2.32
DDX11-220ENST00000542244 RXRBP28702 533 aa29.52■■■□□ 2.32
DDX11-220ENST00000542244 CFAP70Q5T0N1 1121 aa29.51■■■□□ 2.31
DDX11-220ENST00000542244 YTHDC2Q9H6S0 1430 aaKnown RBP29.51■■■□□ 2.31
DDX11-220ENST00000542244 C14orf93Q9H972 538 aaKnown RBP29.49■■■□□ 2.31
DDX11-220ENST00000542244 NRXN1Q9ULB1 1477 aa29.48■■■□□ 2.31
DDX11-220ENST00000542244 KNDC1Q76NI1 1749 aa29.48■■■□□ 2.31
DDX11-220ENST00000542244 FOXO3O43524 673 aa29.48■■■□□ 2.31
DDX11-220ENST00000542244 PXDNQ92626 1479 aa29.48■■■□□ 2.31
DDX11-220ENST00000542244 UPF1Q92900 1129 aaKnown RBP eCLIP29.45■■■□□ 2.31
DDX11-220ENST00000542244 QTRT2Q9H974 415 aaKnown RBP29.45■■■□□ 2.31
DDX11-220ENST00000542244 NGLY1Q96IV0 654 aa29.44■■■□□ 2.3
DDX11-220ENST00000542244 MYOM2P54296 1465 aa29.42■■■□□ 2.3
DDX11-220ENST00000542244 RGS12O14924 1447 aa29.41■■■□□ 2.3
DDX11-220ENST00000542244 FMN2Q9NZ56 1722 aa29.41■■■□□ 2.3
DDX11-220ENST00000542244 COL22A1Q8NFW1 1626 aaPredicted RBP29.41■■■□□ 2.3
DDX11-220ENST00000542244 NPHP3Q7Z494 1330 aa29.41■■■□□ 2.3
DDX11-220ENST00000542244 SAFB2Q14151 953 aaKnown RBP eCLIP29.4■■■□□ 2.3
DDX11-220ENST00000542244 CDK12Q9NYV4 1490 aaPredicted RBP29.39■■■□□ 2.3
DDX11-220ENST00000542244 RBM6P78332 1123 aaKnown RBP29.36■■■□□ 2.29
DDX11-220ENST00000542244 SIRT1Q96EB6 747 aa29.36■■■□□ 2.29
DDX11-220ENST00000542244 PRAM1Q96QH2 718 aa29.36■■■□□ 2.29
DDX11-220ENST00000542244 DHX57Q6P158 1386 aaKnown RBP29.35■■■□□ 2.29
DDX11-220ENST00000542244 USP21Q9UK80 565 aa29.34■■■□□ 2.29
DDX11-220ENST00000542244 ACIN1Q9UKV3 1341 aaKnown RBP29.34■■■□□ 2.29
DDX11-220ENST00000542244 FNBP4Q8N3X1 1017 aaPredicted RBP29.33■■■□□ 2.29
DDX11-220ENST00000542244 KDM2AQ9Y2K7 1162 aa29.33■■■□□ 2.29
DDX11-220ENST00000542244 RGPD8O14715 1765 aaPredicted RBP29.33■■■□□ 2.29
DDX11-220ENST00000542244 ADGRB1O14514 1584 aa29.32■■■□□ 2.28
DDX11-220ENST00000542244 SPATA31A3Q5VYP0 1347 aa29.29■■■□□ 2.28
DDX11-220ENST00000542244 KRT28Q7Z3Y7 464 aa29.28■■■□□ 2.28
DDX11-220ENST00000542244 DCAF11Q8TEB1 546 aa29.28■■■□□ 2.28
DDX11-220ENST00000542244 BCL9LQ86UU0 1499 aa29.28■■■□□ 2.28
DDX11-220ENST00000542244 ATRNO75882 1429 aa29.28■■■□□ 2.28
DDX11-220ENST00000542244 TRAK1Q9UPV9 953 aa29.27■■■□□ 2.28
DDX11-220ENST00000542244 PHF8Q9UPP1 1060 aa29.26■■■□□ 2.27
DDX11-220ENST00000542244 KIF1AQ12756 1690 aa29.25■■■□□ 2.27
DDX11-220ENST00000542244 USP32Q8NFA0 1604 aa29.25■■■□□ 2.27
DDX11-220ENST00000542244 HIRIP3Q9BW71 556 aaPredicted RBP29.25■■■□□ 2.27
DDX11-220ENST00000542244 DLC1Q96QB1 1528 aa29.25■■■□□ 2.27
DDX11-220ENST00000542244 PLEKHG5O94827 1062 aa29.24■■■□□ 2.27
DDX11-220ENST00000542244 TRPC5Q9UL62 973 aaPredicted RBP29.24■■■□□ 2.27
DDX11-220ENST00000542244 CABLES1Q8TDN4 633 aa29.23■■■□□ 2.27
DDX11-220ENST00000542244 POGKQ9P215 609 aa29.23■■■□□ 2.27
DDX11-220ENST00000542244 MARF1Q9Y4F3 1742 aaKnown RBP29.22■■■□□ 2.27
DDX11-220ENST00000542244 PMFBP1Q8TBY8 1022 aa29.21■■■□□ 2.27
DDX11-220ENST00000542244 MINK1Q8N4C8 1332 aaPredicted RBP29.2■■■□□ 2.27
DDX11-220ENST00000542244 HRCP23327 699 aa29.19■■■□□ 2.26
DDX11-220ENST00000542244 PRR36Q9H6K5 1346 aa29.19■■■□□ 2.26
DDX11-220ENST00000542244 TNS3Q68CZ2 1445 aa29.17■■■□□ 2.26
DDX11-220ENST00000542244 ADGRB2O60241 1585 aa29.16■■■□□ 2.26
DDX11-220ENST00000542244 SLIT2O94813 1529 aa29.14■■■□□ 2.25
DDX11-220ENST00000542244 ANKARQ7Z5J8 1434 aa29.12■■■□□ 2.25
DDX11-220ENST00000542244 PSME1Q06323 249 aa29.12■■■□□ 2.25
DDX11-220ENST00000542244 GJD4Q96KN9 370 aaPredicted RBP29.12■■■□□ 2.25
DDX11-220ENST00000542244 LMOD2Q6P5Q4 547 aa29.11■■■□□ 2.25
DDX11-220ENST00000542244 SBNO1A3KN83 1393 aa29.11■■■□□ 2.25
DDX11-220ENST00000542244 UNC5CLQ8IV45 518 aa29.1■■■□□ 2.25
DDX11-220ENST00000542244 GLI3P10071 1580 aa29.09■■■□□ 2.25
DDX11-220ENST00000542244 WASLO00401 505 aaPredicted RBP29.08■■■□□ 2.25
DDX11-220ENST00000542244 ABCA3Q99758 1704 aa29.08■■■□□ 2.25
DDX11-220ENST00000542244 RALGAPBQ86X10 1494 aa29.07■■■□□ 2.24
DDX11-220ENST00000542244 TRPM3Q9HCF6 1732 aaPredicted RBP29.06■■■□□ 2.24
DDX11-220ENST00000542244 ATAD2Q6PL18 1390 aa29.06■■■□□ 2.24
DDX11-220ENST00000542244 ARHGEF28Q8N1W1 1705 aaKnown RBP29.06■■■□□ 2.24
DDX11-220ENST00000542244 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.06■■■□□ 2.24
DDX11-220ENST00000542244 TULP4Q9NRJ4 1543 aa29.05■■■□□ 2.24
DDX11-220ENST00000542244 FAM83GA6ND36 823 aa29.03■■■□□ 2.24
DDX11-220ENST00000542244 HAP1P54257 671 aaPredicted RBP29.03■■■□□ 2.24
DDX11-220ENST00000542244 NBPF1Q3BBV0 1214 aa29.02■■■□□ 2.24
DDX11-220ENST00000542244 STAC3Q96MF2 364 aa29.01■■■□□ 2.23
DDX11-220ENST00000542244 PLCH1Q4KWH8 1693 aa29.01■■■□□ 2.23
DDX11-220ENST00000542244 ARHGEF10O15013 1369 aa29.01■■■□□ 2.23
DDX11-220ENST00000542244 ALS2Q96Q42 1657 aa28.99■■■□□ 2.23
DDX11-220ENST00000542244 ATP7BP35670 1465 aa28.97■■■□□ 2.23
DDX11-220ENST00000542244 VPS72Q15906 364 aa28.96■■■□□ 2.23
DDX11-220ENST00000542244 NUDT16Q96DE0 195 aaKnown RBP28.96■■■□□ 2.23
DDX11-220ENST00000542244 EP400Q96L91 3159 aa28.95■■■□□ 2.23
DDX11-220ENST00000542244 GPRASP1Q5JY77 1395 aa28.95■■■□□ 2.22
DDX11-220ENST00000542244 NGDNQ8NEJ9 315 aaKnown RBP28.94■■■□□ 2.22
DDX11-220ENST00000542244 CDK19Q9BWU1 502 aa28.94■■■□□ 2.22
DDX11-220ENST00000542244 BRWD3Q6RI45 1802 aa28.94■■■□□ 2.22
DDX11-220ENST00000542244 EIF3AQ14152 1382 aaKnown RBP28.93■■■□□ 2.22
DDX11-220ENST00000542244 SEPT12Q8IYM1 358 aa28.92■■■□□ 2.22
DDX11-220ENST00000542244 PAK3O75914 559 aaPredicted RBP28.91■■■□□ 2.22
DDX11-220ENST00000542244 CCDC9Q9Y3X0 531 aaKnown RBP28.91■■■□□ 2.22
DDX11-220ENST00000542244 NWD2Q9ULI1 1742 aa28.91■■■□□ 2.22
DDX11-220ENST00000542244 CRYBG1Q9Y4K1 1723 aa28.91■■■□□ 2.22
DDX11-220ENST00000542244 NRAPQ86VF7 1730 aa28.89■■■□□ 2.22
DDX11-220ENST00000542244 BTG4Q9NY30 223 aa28.89■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms