RNA–Protein interactions for RNA: ENST00000542114.1

COL6A4P2-206, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-206ENST00000542114 USB1Q9BQ65 265 aaKnown RBP8.64□□□□□ -1.03
COL6A4P2-206ENST00000542114 ATP1B4Q9UN42 357 aaPredicted RBP8.64□□□□□ -1.03
COL6A4P2-206ENST00000542114 MYSM1Q5VVJ2 828 aa8.63□□□□□ -1.03
COL6A4P2-206ENST00000542114 RSBN1LQ6PCB5 846 aaPredicted RBP8.63□□□□□ -1.03
COL6A4P2-206ENST00000542114 SYMPKQ92797 1274 aaKnown RBP8.63□□□□□ -1.03
COL6A4P2-206ENST00000542114 PCDHGC3Q9UN70 934 aa8.63□□□□□ -1.03
COL6A4P2-206ENST00000542114 SPTLC1O15269 473 aa8.62□□□□□ -1.03
COL6A4P2-206ENST00000542114 GJA5P36382 358 aa8.62□□□□□ -1.03
COL6A4P2-206ENST00000542114 FAM160A2Q8N612 972 aaPredicted RBP8.62□□□□□ -1.03
COL6A4P2-206ENST00000542114 IL27Q8NEV9 243 aa8.62□□□□□ -1.03
COL6A4P2-206ENST00000542114 RNF223E7ERA6 249 aa8.61□□□□□ -1.03
COL6A4P2-206ENST00000542114 PPEF1O14829 653 aaPredicted RBP8.61□□□□□ -1.03
COL6A4P2-206ENST00000542114 CSPP1Q1MSJ5 1256 aa8.61□□□□□ -1.03
COL6A4P2-206ENST00000542114 MSS51Q4VC12 460 aa8.61□□□□□ -1.03
COL6A4P2-206ENST00000542114 POLR3EQ9NVU0 708 aa8.61□□□□□ -1.03
COL6A4P2-206ENST00000542114 RGS20O76081 388 aa8.6□□□□□ -1.03
COL6A4P2-206ENST00000542114 MTMR2Q13614 643 aa8.6□□□□□ -1.03
COL6A4P2-206ENST00000542114 RETREG3Q86VR2 466 aa8.6□□□□□ -1.03
COL6A4P2-206ENST00000542114 PCDHB15Q9Y5E8 787 aa8.6□□□□□ -1.03
COL6A4P2-206ENST00000542114 PLEKHG3A1L390 1219 aa8.59□□□□□ -1.03
COL6A4P2-206ENST00000542114 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
COL6A4P2-206ENST00000542114 CLK2P49760 499 aaKnown RBP8.59□□□□□ -1.03
COL6A4P2-206ENST00000542114 ANKLE1Q8NAG6 615 aa8.59□□□□□ -1.03
COL6A4P2-206ENST00000542114 PRDM9Q9NQV7 894 aa8.59□□□□□ -1.03
COL6A4P2-206ENST00000542114 LIMD1Q9UGP4 676 aa8.59□□□□□ -1.03
COL6A4P2-206ENST00000542114 NUTM2BA6NNL0 878 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P2-206ENST00000542114 NUTM2EB1AL46 878 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P2-206ENST00000542114 SKIV2LQ15477 1246 aaKnown RBP8.58□□□□□ -1.04
COL6A4P2-206ENST00000542114 NUTM2DQ5VT03 806 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P2-206ENST00000542114 NUTM2AQ8IVF1 878 aaPredicted RBP8.58□□□□□ -1.04
COL6A4P2-206ENST00000542114 ZBTB3Q9H5J0 574 aa8.58□□□□□ -1.04
COL6A4P2-206ENST00000542114 SH3D19Q5HYK7 790 aa8.57□□□□□ -1.04
COL6A4P2-206ENST00000542114 PRPF38BQ5VTL8 546 aaKnown RBP8.57□□□□□ -1.04
COL6A4P2-206ENST00000542114 HRCP23327 699 aa8.56□□□□□ -1.04
COL6A4P2-206ENST00000542114 PRR7Q8TB68 274 aa8.56□□□□□ -1.04
COL6A4P2-206ENST00000542114 PRKD2Q9BZL6 878 aa8.56□□□□□ -1.04
COL6A4P2-206ENST00000542114 FCF1Q9Y324 198 aaKnown RBP8.56□□□□□ -1.04
COL6A4P2-206ENST00000542114 MMP16P51512 607 aa8.55□□□□□ -1.04
COL6A4P2-206ENST00000542114 TUSC1Q2TAM9 212 aa8.55□□□□□ -1.04
COL6A4P2-206ENST00000542114 CABLES1Q8TDN4 633 aa8.55□□□□□ -1.04
COL6A4P2-206ENST00000542114 DXOO77932 396 aaKnown RBP8.54□□□□□ -1.04
COL6A4P2-206ENST00000542114 JUNDP17535 347 aa8.54□□□□□ -1.04
COL6A4P2-206ENST00000542114 QPCTQ16769 361 aa8.54□□□□□ -1.04
COL6A4P2-206ENST00000542114 CCDC24Q8N4L8 307 aa8.53□□□□□ -1.04
COL6A4P2-206ENST00000542114 PROCA1Q8NCQ7 364 aaPredicted RBP8.53□□□□□ -1.04
COL6A4P2-206ENST00000542114 TSC1Q92574 1164 aa8.53□□□□□ -1.04
COL6A4P2-206ENST00000542114 PCMTD1Q96MG8 357 aaPredicted RBP8.53□□□□□ -1.04
COL6A4P2-206ENST00000542114 ZBTB24O43167 697 aaPredicted RBP8.52□□□□□ -1.05
COL6A4P2-206ENST00000542114 LILRB3O75022 631 aa8.52□□□□□ -1.05
COL6A4P2-206ENST00000542114 SLC19A1P41440 591 aa8.52□□□□□ -1.05
COL6A4P2-206ENST00000542114 GOPCQ9HD26 462 aa8.52□□□□□ -1.05
COL6A4P2-206ENST00000542114 V9GY48 417 aaPredicted RBP8.52□□□□□ -1.05
COL6A4P2-206ENST00000542114 CFAP99D6REC4 459 aa8.5□□□□□ -1.05
COL6A4P2-206ENST00000542114 RTL5Q5HYW3 569 aaPredicted RBP8.5□□□□□ -1.05
COL6A4P2-206ENST00000542114 PLA2G2CQ5R387 149 aa8.5□□□□□ -1.05
COL6A4P2-206ENST00000542114 DESI1Q6ICB0 168 aa8.5□□□□□ -1.05
COL6A4P2-206ENST00000542114 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
COL6A4P2-206ENST00000542114 LIAT1Q6ZQX7 453 aa8.49□□□□□ -1.05
COL6A4P2-206ENST00000542114 HELBQ8NG08 1087 aaPredicted RBP8.49□□□□□ -1.05
COL6A4P2-206ENST00000542114 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.49□□□□□ -1.05
COL6A4P2-206ENST00000542114 CD2BP2O95400 341 aaKnown RBP8.48□□□□□ -1.05
COL6A4P2-206ENST00000542114 PTPRNQ16849 979 aa8.48□□□□□ -1.05
COL6A4P2-206ENST00000542114 CCNYL3P0C7X3 344 aa8.47□□□□□ -1.05
COL6A4P2-206ENST00000542114 RPIAP49247 311 aa8.47□□□□□ -1.05
COL6A4P2-206ENST00000542114 SPRYD7Q5W111 196 aa8.47□□□□□ -1.05
COL6A4P2-206ENST00000542114 LYPD8Q6UX82 237 aa8.46□□□□□ -1.06
COL6A4P2-206ENST00000542114 EMID1Q96A84 441 aaPredicted RBP8.46□□□□□ -1.06
COL6A4P2-206ENST00000542114 CTHP32929 405 aa8.45□□□□□ -1.06
COL6A4P2-206ENST00000542114 PPP2R2DQ66LE6 453 aa8.45□□□□□ -1.06
COL6A4P2-206ENST00000542114 ZNF598Q86UK7 904 aaKnown RBP8.45□□□□□ -1.06
COL6A4P2-206ENST00000542114 EVA1BQ9NVM1 165 aa8.45□□□□□ -1.06
COL6A4P2-206ENST00000542114 ZNF697Q5TEC3 545 aa8.44□□□□□ -1.06
COL6A4P2-206ENST00000542114 AP1G2O75843 785 aa8.43□□□□□ -1.06
COL6A4P2-206ENST00000542114 CTDSPL2Q05D32 466 aa8.43□□□□□ -1.06
COL6A4P2-206ENST00000542114 KCNH2Q12809 1159 aa8.43□□□□□ -1.06
COL6A4P2-206ENST00000542114 PER1O15534 1290 aaPredicted RBP8.42□□□□□ -1.06
COL6A4P2-206ENST00000542114 TRIM32Q13049 653 aa8.42□□□□□ -1.06
COL6A4P2-206ENST00000542114 IRX2Q9BZI1 471 aaPredicted RBP8.42□□□□□ -1.06
COL6A4P2-206ENST00000542114 RFC5P40937 340 aa8.41□□□□□ -1.06
COL6A4P2-206ENST00000542114 FBXO31Q5XUX0 539 aaPredicted RBP8.41□□□□□ -1.06
COL6A4P2-206ENST00000542114 PTCRAQ6ISU1 281 aaPredicted RBP8.41□□□□□ -1.06
COL6A4P2-206ENST00000542114 TMEM259Q4ZIN3 620 aa8.4□□□□□ -1.06
COL6A4P2-206ENST00000542114 UNC93B1Q9H1C4 597 aa8.4□□□□□ -1.06
COL6A4P2-206ENST00000542114 GFRA3O60609 400 aa8.39□□□□□ -1.07
COL6A4P2-206ENST00000542114 FOXC1Q12948 553 aa8.39□□□□□ -1.07
COL6A4P2-206ENST00000542114 PDZRN3Q9UPQ7 1066 aa8.39□□□□□ -1.07
COL6A4P2-206ENST00000542114 F12P00748 615 aaPredicted RBP8.38□□□□□ -1.07
COL6A4P2-206ENST00000542114 MAP10Q9P2G4 905 aa8.38□□□□□ -1.07
COL6A4P2-206ENST00000542114 LAPTM4AQ15012 233 aa8.37□□□□□ -1.07
COL6A4P2-206ENST00000542114 LRRN4Q8WUT4 740 aa8.37□□□□□ -1.07
COL6A4P2-206ENST00000542114 BAP1Q92560 729 aa8.37□□□□□ -1.07
COL6A4P2-206ENST00000542114 TNFRSF10AO00220 468 aa8.36□□□□□ -1.07
COL6A4P2-206ENST00000542114 WNT7BP56706 349 aa8.36□□□□□ -1.07
COL6A4P2-206ENST00000542114 LINC01559Q495D7 138 aa8.36□□□□□ -1.07
COL6A4P2-206ENST00000542114 USP17L8P0C7I0 530 aa8.35□□□□□ -1.07
COL6A4P2-206ENST00000542114 ARMC2Q8NEN0 867 aa8.35□□□□□ -1.07
COL6A4P2-206ENST00000542114 GDF9O60383 454 aa8.34□□□□□ -1.07
COL6A4P2-206ENST00000542114 PRR20EP86478 221 aa8.34□□□□□ -1.07
COL6A4P2-206ENST00000542114 PRR20CP86479 221 aa8.34□□□□□ -1.07
COL6A4P2-206ENST00000542114 PRR20DP86480 221 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms