RNA–Protein interactions for RNA: ENST00000542095.6

NECAP1-206, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 2

Gene NECAP1, Length 2,385 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-206ENST00000542095 CDCA7LQ96GN5 454 aa14.36□□□□□ -0.11
NECAP1-206ENST00000542095 RRP1P56182 461 aaKnown RBP14.35□□□□□ -0.11
NECAP1-206ENST00000542095 POLR3AO14802 1390 aaPredicted RBP14.35□□□□□ -0.11
NECAP1-206ENST00000542095 CGNL1Q0VF96 1302 aa14.35□□□□□ -0.11
NECAP1-206ENST00000542095 MORC1Q86VD1 984 aa14.34□□□□□ -0.11
NECAP1-206ENST00000542095 ESF1Q9H501 851 aaKnown RBP14.34□□□□□ -0.11
NECAP1-206ENST00000542095 SETD1AO15047 1707 aaKnown RBP14.34□□□□□ -0.11
NECAP1-206ENST00000542095 RIMS2Q9UQ26 1411 aa14.33□□□□□ -0.11
NECAP1-206ENST00000542095 NSD2O96028 1365 aa14.33□□□□□ -0.12
NECAP1-206ENST00000542095 SAFB2Q14151 953 aaKnown RBP eCLIP14.33□□□□□ -0.12
NECAP1-206ENST00000542095 CABP2Q9NPB3 220 aa14.33□□□□□ -0.12
NECAP1-206ENST00000542095 SENP3Q9H4L4 574 aaPredicted RBP14.32□□□□□ -0.12
NECAP1-206ENST00000542095 POGKQ9P215 609 aa14.32□□□□□ -0.12
NECAP1-206ENST00000542095 SHPRHQ149N8 1683 aa14.32□□□□□ -0.12
NECAP1-206ENST00000542095 ZMYM3Q14202 1370 aa14.32□□□□□ -0.12
NECAP1-206ENST00000542095 ATAD2Q6PL18 1390 aa14.32□□□□□ -0.12
NECAP1-206ENST00000542095 PLEKHH1Q9ULM0 1364 aa14.32□□□□□ -0.12
NECAP1-206ENST00000542095 DLC1Q96QB1 1528 aa14.31□□□□□ -0.12
NECAP1-206ENST00000542095 PRAM1Q96QH2 718 aa14.31□□□□□ -0.12
NECAP1-206ENST00000542095 SRPK2P78362 688 aaKnown RBP14.31□□□□□ -0.12
NECAP1-206ENST00000542095 ANKRD26Q9UPS8 1709 aa14.3□□□□□ -0.12
NECAP1-206ENST00000542095 ZNF521Q96K83 1311 aa14.3□□□□□ -0.12
NECAP1-206ENST00000542095 CCDC136Q96JN2 1154 aa14.3□□□□□ -0.12
NECAP1-206ENST00000542095 MINK1Q8N4C8 1332 aaPredicted RBP14.29□□□□□ -0.12
NECAP1-206ENST00000542095 GOLGA2Q08379 1002 aa14.29□□□□□ -0.12
NECAP1-206ENST00000542095 NGEFQ8N5V2 710 aa14.29□□□□□ -0.12
NECAP1-206ENST00000542095 CCDC146Q8IYE0 955 aa14.29□□□□□ -0.12
NECAP1-206ENST00000542095 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.29□□□□□ -0.12
NECAP1-206ENST00000542095 NRXN3Q9Y4C0 1643 aa14.28□□□□□ -0.12
NECAP1-206ENST00000542095 RBM19Q9Y4C8 960 aaKnown RBP14.28□□□□□ -0.12
NECAP1-206ENST00000542095 A0A1W2PP64 1363 aa14.28□□□□□ -0.12
NECAP1-206ENST00000542095 ABCC11Q96J66 1382 aa14.27□□□□□ -0.12
NECAP1-206ENST00000542095 TNNT2P45379 298 aaPredicted RBP14.26□□□□□ -0.13
NECAP1-206ENST00000542095 CFAP53Q96M91 514 aa14.26□□□□□ -0.13
NECAP1-206ENST00000542095 TERF2IPQ9NYB0 399 aa14.26□□□□□ -0.13
NECAP1-206ENST00000542095 TNRQ92752 1358 aa14.26□□□□□ -0.13
NECAP1-206ENST00000542095 UBR1Q8IWV7 1749 aa14.26□□□□□ -0.13
NECAP1-206ENST00000542095 APAF1O14727 1248 aa14.26□□□□□ -0.13
NECAP1-206ENST00000542095 DUSP27Q5VZP5 1158 aa14.26□□□□□ -0.13
NECAP1-206ENST00000542095 KNDC1Q76NI1 1749 aa14.26□□□□□ -0.13
NECAP1-206ENST00000542095 KIF20BQ96Q89 1820 aa14.26□□□□□ -0.13
NECAP1-206ENST00000542095 HDGFP51858 240 aaKnown RBP14.25□□□□□ -0.13
NECAP1-206ENST00000542095 SLFN5Q08AF3 891 aa14.24□□□□□ -0.13
NECAP1-206ENST00000542095 MED14O60244 1454 aa14.24□□□□□ -0.13
NECAP1-206ENST00000542095 MTHFSP49914 203 aa14.24□□□□□ -0.13
NECAP1-206ENST00000542095 CDK19Q9BWU1 502 aa14.24□□□□□ -0.13
NECAP1-206ENST00000542095 CD163L1Q9NR16 1453 aa14.24□□□□□ -0.13
NECAP1-206ENST00000542095 EXOC6Q8TAG9 804 aa14.23□□□□□ -0.13
NECAP1-206ENST00000542095 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
NECAP1-206ENST00000542095 TRMT2AQ8IZ69 625 aaKnown RBP14.22□□□□□ -0.13
NECAP1-206ENST00000542095 E9PSI1 815 aa14.21□□□□□ -0.13
NECAP1-206ENST00000542095 RUNDC1Q96C34 613 aa14.21□□□□□ -0.13
NECAP1-206ENST00000542095 NKTRP30414 1462 aaKnown RBP14.2□□□□□ -0.14
NECAP1-206ENST00000542095 ATP7BP35670 1465 aa14.2□□□□□ -0.14
NECAP1-206ENST00000542095 IQSEC2Q5JU85 1478 aa14.2□□□□□ -0.14
NECAP1-206ENST00000542095 WAPLQ7Z5K2 1190 aa14.2□□□□□ -0.14
NECAP1-206ENST00000542095 METP08581 1390 aa14.19□□□□□ -0.14
NECAP1-206ENST00000542095 TMEM2Q9UHN6 1383 aa14.19□□□□□ -0.14
NECAP1-206ENST00000542095 NLRP1Q9C000 1473 aa14.19□□□□□ -0.14
NECAP1-206ENST00000542095 PLIN1O60240 522 aa14.19□□□□□ -0.14
NECAP1-206ENST00000542095 CPS1P31327 1500 aa14.19□□□□□ -0.14
NECAP1-206ENST00000542095 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.18□□□□□ -0.14
NECAP1-206ENST00000542095 GGNBP2Q9H3C7 697 aa14.18□□□□□ -0.14
NECAP1-206ENST00000542095 TECPR2O15040 1411 aa14.18□□□□□ -0.14
NECAP1-206ENST00000542095 FAM135BQ49AJ0 1406 aa14.18□□□□□ -0.14
NECAP1-206ENST00000542095 FYB1O15117 783 aa14.18□□□□□ -0.14
NECAP1-206ENST00000542095 CABP1Q9NZU7 370 aa14.18□□□□□ -0.14
NECAP1-206ENST00000542095 SIRT1Q96EB6 747 aa14.17□□□□□ -0.14
NECAP1-206ENST00000542095 C3P01024 1663 aa14.17□□□□□ -0.14
NECAP1-206ENST00000542095 FER1L4A9Z1Z3 1794 aa14.17□□□□□ -0.14
NECAP1-206ENST00000542095 WWC1Q8IX03 1113 aa14.17□□□□□ -0.14
NECAP1-206ENST00000542095 CRBNQ96SW2 442 aa14.16□□□□□ -0.14
NECAP1-206ENST00000542095 SPINK5Q9NQ38 1064 aaPredicted RBP14.16□□□□□ -0.14
NECAP1-206ENST00000542095 ADGRB2O60241 1585 aa14.15□□□□□ -0.14
NECAP1-206ENST00000542095 WASLO00401 505 aaPredicted RBP14.15□□□□□ -0.14
NECAP1-206ENST00000542095 NCBP3Q53F19 620 aaKnown RBP14.15□□□□□ -0.14
NECAP1-206ENST00000542095 TCP11L2Q8N4U5 519 aa14.15□□□□□ -0.14
NECAP1-206ENST00000542095 COL3A1P02461 1466 aaPredicted RBP14.15□□□□□ -0.14
NECAP1-206ENST00000542095 ITSN1Q15811 1721 aa14.14□□□□□ -0.15
NECAP1-206ENST00000542095 U2AF1L5P0DN76 240 aaPredicted RBP14.14□□□□□ -0.15
NECAP1-206ENST00000542095 U2AF1Q01081 240 aaKnown RBP eCLIP14.14□□□□□ -0.15
NECAP1-206ENST00000542095 TXNDC2Q86VQ3 553 aa14.14□□□□□ -0.15
NECAP1-206ENST00000542095 MON2Q7Z3U7 1717 aa14.14□□□□□ -0.15
NECAP1-206ENST00000542095 CCDC27Q2M243 656 aa14.14□□□□□ -0.15
NECAP1-206ENST00000542095 AKAP12Q02952 1782 aa14.13□□□□□ -0.15
NECAP1-206ENST00000542095 MAP2P11137 1827 aaKnown RBP14.13□□□□□ -0.15
NECAP1-206ENST00000542095 PPIP5K1Q6PFW1 1433 aa14.13□□□□□ -0.15
NECAP1-206ENST00000542095 DMRT2Q9Y5R5 561 aa14.13□□□□□ -0.15
NECAP1-206ENST00000542095 PLEKHG1Q9ULL1 1385 aa14.13□□□□□ -0.15
NECAP1-206ENST00000542095 NEUROD2Q15784 382 aa14.12□□□□□ -0.15
NECAP1-206ENST00000542095 WDR63Q8IWG1 891 aa14.12□□□□□ -0.15
NECAP1-206ENST00000542095 PHF23Q9BUL5 403 aaPredicted RBP14.12□□□□□ -0.15
NECAP1-206ENST00000542095 ADAMTS13Q76LX8 1427 aa14.12□□□□□ -0.15
NECAP1-206ENST00000542095 CDC42BPGQ6DT37 1551 aa14.12□□□□□ -0.15
NECAP1-206ENST00000542095 C20orf194Q5TEA3 1177 aa14.12□□□□□ -0.15
NECAP1-206ENST00000542095 RRP7AQ9Y3A4 280 aaKnown RBP14.12□□□□□ -0.15
NECAP1-206ENST00000542095 FANCIQ9NVI1 1328 aa14.12□□□□□ -0.15
NECAP1-206ENST00000542095 CPSF1Q10570 1443 aaKnown RBP14.12□□□□□ -0.15
NECAP1-206ENST00000542095 EDC4Q6P2E9 1401 aaKnown RBP14.12□□□□□ -0.15
NECAP1-206ENST00000542095 PNPLA6Q8IY17 1366 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms