RNA–Protein interactions for RNA: ENST00000542040.1

TRPT1-212, Transcript of tRNA phosphotransferase 1, humanhuman

TSL 2

Gene TRPT1, Length 914 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPT1-212ENST00000542040 WAPLQ7Z5K2 1190 aa25.47■■□□□ 1.67
TRPT1-212ENST00000542040 YTHDC2Q9H6S0 1430 aaKnown RBP25.46■■□□□ 1.67
TRPT1-212ENST00000542040 SHPRHQ149N8 1683 aa25.46■■□□□ 1.67
TRPT1-212ENST00000542040 POTEAQ6S8J7 498 aa25.46■■□□□ 1.67
TRPT1-212ENST00000542040 ORAI2Q96SN7 254 aa25.46■■□□□ 1.67
TRPT1-212ENST00000542040 NPHP3Q7Z494 1330 aa25.45■■□□□ 1.66
TRPT1-212ENST00000542040 CFAP70Q5T0N1 1121 aa25.45■■□□□ 1.66
TRPT1-212ENST00000542040 IFT172Q9UG01 1749 aa25.45■■□□□ 1.66
TRPT1-212ENST00000542040 DCAF11Q8TEB1 546 aa25.43■■□□□ 1.66
TRPT1-212ENST00000542040 POGKQ9P215 609 aa25.43■■□□□ 1.66
TRPT1-212ENST00000542040 SOS2Q07890 1332 aaPredicted RBP25.42■■□□□ 1.66
TRPT1-212ENST00000542040 NHSL1Q5SYE7 1610 aa25.42■■□□□ 1.66
TRPT1-212ENST00000542040 KDM2AQ9Y2K7 1162 aa25.42■■□□□ 1.66
TRPT1-212ENST00000542040 NRXN1Q9ULB1 1477 aa25.41■■□□□ 1.66
TRPT1-212ENST00000542040 DDX17Q92841 729 aaKnown RBP25.41■■□□□ 1.66
TRPT1-212ENST00000542040 LAMC1P11047 1609 aa25.41■■□□□ 1.66
TRPT1-212ENST00000542040 CDC42BPGQ6DT37 1551 aa25.4■■□□□ 1.66
TRPT1-212ENST00000542040 PNPLA6Q8IY17 1366 aa25.38■■□□□ 1.65
TRPT1-212ENST00000542040 LRP6O75581 1613 aa25.37■■□□□ 1.65
TRPT1-212ENST00000542040 RXRBP28702 533 aa25.36■■□□□ 1.65
TRPT1-212ENST00000542040 PRAM1Q96QH2 718 aa25.36■■□□□ 1.65
TRPT1-212ENST00000542040 KNDC1Q76NI1 1749 aa25.36■■□□□ 1.65
TRPT1-212ENST00000542040 NUTM2FA1L443 756 aa25.35■■□□□ 1.65
TRPT1-212ENST00000542040 FOXO3O43524 673 aa25.35■■□□□ 1.65
TRPT1-212ENST00000542040 NGLY1Q96IV0 654 aa25.34■■□□□ 1.65
TRPT1-212ENST00000542040 C8orf37Q96NL8 207 aa25.34■■□□□ 1.65
TRPT1-212ENST00000542040 PLEKHH1Q9ULM0 1364 aa25.33■■□□□ 1.65
TRPT1-212ENST00000542040 PSME1Q06323 249 aa25.33■■□□□ 1.65
TRPT1-212ENST00000542040 AFF2P51816 1311 aa25.33■■□□□ 1.64
TRPT1-212ENST00000542040 ADAMTS2O95450 1211 aa25.3■■□□□ 1.64
TRPT1-212ENST00000542040 SAFB2Q14151 953 aaKnown RBP eCLIP25.3■■□□□ 1.64
TRPT1-212ENST00000542040 TRAK1Q9UPV9 953 aa25.3■■□□□ 1.64
TRPT1-212ENST00000542040 EIF3AQ14152 1382 aaKnown RBP25.3■■□□□ 1.64
TRPT1-212ENST00000542040 DLC1Q96QB1 1528 aa25.28■■□□□ 1.64
TRPT1-212ENST00000542040 PHF8Q9UPP1 1060 aa25.28■■□□□ 1.64
TRPT1-212ENST00000542040 QTRT2Q9H974 415 aaKnown RBP25.27■■□□□ 1.64
TRPT1-212ENST00000542040 KRT28Q7Z3Y7 464 aa25.25■■□□□ 1.63
TRPT1-212ENST00000542040 RBM6P78332 1123 aaKnown RBP25.24■■□□□ 1.63
TRPT1-212ENST00000542040 XPCQ01831 940 aaPredicted RBP25.23■■□□□ 1.63
TRPT1-212ENST00000542040 HAP1P54257 671 aaPredicted RBP25.22■■□□□ 1.63
TRPT1-212ENST00000542040 USP21Q9UK80 565 aa25.22■■□□□ 1.63
TRPT1-212ENST00000542040 ANKARQ7Z5J8 1434 aa25.21■■□□□ 1.63
TRPT1-212ENST00000542040 KIF1AQ12756 1690 aa25.21■■□□□ 1.63
TRPT1-212ENST00000542040 FMN2Q9NZ56 1722 aa25.2■■□□□ 1.63
TRPT1-212ENST00000542040 TRPC5Q9UL62 973 aaPredicted RBP25.2■■□□□ 1.62
TRPT1-212ENST00000542040 PXDNQ92626 1479 aa25.2■■□□□ 1.62
TRPT1-212ENST00000542040 SPATA31A3Q5VYP0 1347 aa25.19■■□□□ 1.62
TRPT1-212ENST00000542040 CDK12Q9NYV4 1490 aaPredicted RBP25.19■■□□□ 1.62
TRPT1-212ENST00000542040 ADGRB1O14514 1584 aa25.18■■□□□ 1.62
TRPT1-212ENST00000542040 MINK1Q8N4C8 1332 aaPredicted RBP25.18■■□□□ 1.62
TRPT1-212ENST00000542040 FNBP4Q8N3X1 1017 aaPredicted RBP25.18■■□□□ 1.62
TRPT1-212ENST00000542040 WASLO00401 505 aaPredicted RBP25.17■■□□□ 1.62
TRPT1-212ENST00000542040 HIRIP3Q9BW71 556 aaPredicted RBP25.17■■□□□ 1.62
TRPT1-212ENST00000542040 GPRASP1Q5JY77 1395 aa25.16■■□□□ 1.62
TRPT1-212ENST00000542040 LMOD2Q6P5Q4 547 aa25.15■■□□□ 1.62
TRPT1-212ENST00000542040 COL22A1Q8NFW1 1626 aaPredicted RBP25.15■■□□□ 1.62
TRPT1-212ENST00000542040 SBNO1A3KN83 1393 aa25.14■■□□□ 1.61
TRPT1-212ENST00000542040 ARHGEF10O15013 1369 aa25.14■■□□□ 1.61
TRPT1-212ENST00000542040 PMFBP1Q8TBY8 1022 aa25.13■■□□□ 1.61
TRPT1-212ENST00000542040 NGDNQ8NEJ9 315 aaKnown RBP25.12■■□□□ 1.61
TRPT1-212ENST00000542040 ADGRB2O60241 1585 aa25.11■■□□□ 1.61
TRPT1-212ENST00000542040 TNS3Q68CZ2 1445 aa25.11■■□□□ 1.61
TRPT1-212ENST00000542040 TULP4Q9NRJ4 1543 aa25.06■■□□□ 1.6
TRPT1-212ENST00000542040 UNC5CLQ8IV45 518 aa25.05■■□□□ 1.6
TRPT1-212ENST00000542040 UPF1Q92900 1129 aaKnown RBP eCLIP25.05■■□□□ 1.6
TRPT1-212ENST00000542040 NUDT16Q96DE0 195 aaKnown RBP25.05■■□□□ 1.6
TRPT1-212ENST00000542040 KIAA1210Q9ULL0 1709 aa25.04■■□□□ 1.6
TRPT1-212ENST00000542040 CDK19Q9BWU1 502 aa25.04■■□□□ 1.6
TRPT1-212ENST00000542040 NEUROD1Q13562 356 aa25.03■■□□□ 1.6
TRPT1-212ENST00000542040 L3MBTL2Q969R5 705 aa25.03■■□□□ 1.6
TRPT1-212ENST00000542040 PAK3O75914 559 aaPredicted RBP25.02■■□□□ 1.6
TRPT1-212ENST00000542040 CCDC61Q9Y6R9 512 aa25.02■■□□□ 1.6
TRPT1-212ENST00000542040 ATRNO75882 1429 aa25.02■■□□□ 1.6
TRPT1-212ENST00000542040 GJD4Q96KN9 370 aaPredicted RBP25.01■■□□□ 1.59
TRPT1-212ENST00000542040 PLEKHG5O94827 1062 aa25■■□□□ 1.59
TRPT1-212ENST00000542040 NBPF1Q3BBV0 1214 aa25■■□□□ 1.59
TRPT1-212ENST00000542040 CENPJQ9HC77 1338 aaPredicted RBP25■■□□□ 1.59
TRPT1-212ENST00000542040 RGPD8O14715 1765 aaPredicted RBP24.99■■□□□ 1.59
TRPT1-212ENST00000542040 PRR36Q9H6K5 1346 aa24.99■■□□□ 1.59
TRPT1-212ENST00000542040 RGS12O14924 1447 aa24.98■■□□□ 1.59
TRPT1-212ENST00000542040 ATAD2Q6PL18 1390 aa24.98■■□□□ 1.59
TRPT1-212ENST00000542040 CABLES1Q8TDN4 633 aa24.98■■□□□ 1.59
TRPT1-212ENST00000542040 BCL9LQ86UU0 1499 aa24.97■■□□□ 1.59
TRPT1-212ENST00000542040 SRPK2P78362 688 aaKnown RBP24.97■■□□□ 1.59
TRPT1-212ENST00000542040 SIN3AQ96ST3 1273 aa24.97■■□□□ 1.59
TRPT1-212ENST00000542040 ARHGEF28Q8N1W1 1705 aaKnown RBP24.95■■□□□ 1.59
TRPT1-212ENST00000542040 USP32Q8NFA0 1604 aa24.95■■□□□ 1.58
TRPT1-212ENST00000542040 CCDC9Q9Y3X0 531 aaKnown RBP24.95■■□□□ 1.58
TRPT1-212ENST00000542040 TRIM26Q12899 539 aaPredicted RBP24.94■■□□□ 1.58
TRPT1-212ENST00000542040 MARF1Q9Y4F3 1742 aaKnown RBP24.94■■□□□ 1.58
TRPT1-212ENST00000542040 SLIT2O94813 1529 aa24.92■■□□□ 1.58
TRPT1-212ENST00000542040 PLEKHG3A1L390 1219 aa24.92■■□□□ 1.58
TRPT1-212ENST00000542040 VPS72Q15906 364 aa24.92■■□□□ 1.58
TRPT1-212ENST00000542040 CCDC125Q86Z20 511 aa24.91■■□□□ 1.58
TRPT1-212ENST00000542040 ITSN1Q15811 1721 aa24.91■■□□□ 1.58
TRPT1-212ENST00000542040 ROCK2O75116 1388 aaKnown RBP24.91■■□□□ 1.58
TRPT1-212ENST00000542040 ATP7BP35670 1465 aa24.9■■□□□ 1.58
TRPT1-212ENST00000542040 NBPF8Q3BBV2 869 aa24.9■■□□□ 1.58
TRPT1-212ENST00000542040 ACEP12821 1306 aa24.89■■□□□ 1.58
TRPT1-212ENST00000542040 EVC2Q86UK5 1308 aa24.89■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms