RNA–Protein interactions for RNA: ENST00000541897.5

MSRB3-211, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 489 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-211ENST00000541897 NCOA3Q9Y6Q9 1424 aa29.78■■■□□ 2.36
MSRB3-211ENST00000541897 ROBO2Q9HCK4 1378 aa29.77■■■□□ 2.36
MSRB3-211ENST00000541897 MSH6P52701 1360 aa29.76■■■□□ 2.35
MSRB3-211ENST00000541897 TRAK1Q9UPV9 953 aa29.75■■■□□ 2.35
MSRB3-211ENST00000541897 ARHGEF28Q8N1W1 1705 aaKnown RBP29.74■■■□□ 2.35
MSRB3-211ENST00000541897 EIF3AQ14152 1382 aaKnown RBP29.73■■■□□ 2.35
MSRB3-211ENST00000541897 SLAIN2Q9P270 581 aa29.7■■■□□ 2.35
MSRB3-211ENST00000541897 RGS17Q9UGC6 210 aaPredicted RBP29.7■■■□□ 2.35
MSRB3-211ENST00000541897 PRAM1Q96QH2 718 aa29.68■■■□□ 2.34
MSRB3-211ENST00000541897 USP47Q96K76 1375 aa29.65■■■□□ 2.34
MSRB3-211ENST00000541897 PHLPP1O60346 1717 aa29.65■■■□□ 2.34
MSRB3-211ENST00000541897 WAPLQ7Z5K2 1190 aa29.65■■■□□ 2.34
MSRB3-211ENST00000541897 POGKQ9P215 609 aa29.65■■■□□ 2.34
MSRB3-211ENST00000541897 CENPJQ9HC77 1338 aaPredicted RBP29.65■■■□□ 2.34
MSRB3-211ENST00000541897 PLEKHH1Q9ULM0 1364 aa29.64■■■□□ 2.34
MSRB3-211ENST00000541897 C14orf37Q86TY3 774 aa29.64■■■□□ 2.34
MSRB3-211ENST00000541897 SBNO2Q9Y2G9 1366 aa29.63■■■□□ 2.33
MSRB3-211ENST00000541897 ADGRL3Q9HAR2 1447 aa29.62■■■□□ 2.33
MSRB3-211ENST00000541897 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.62■■■□□ 2.33
MSRB3-211ENST00000541897 EIF4G2P78344 907 aaKnown RBP eCLIP29.6■■■□□ 2.33
MSRB3-211ENST00000541897 SLC24A1O60721 1099 aa29.59■■■□□ 2.33
MSRB3-211ENST00000541897 ADGRB2O60241 1585 aa29.58■■■□□ 2.33
MSRB3-211ENST00000541897 DCCP43146 1447 aa29.58■■■□□ 2.33
MSRB3-211ENST00000541897 C19orf44Q9H6X5 657 aa29.58■■■□□ 2.33
MSRB3-211ENST00000541897 NALCNQ8IZF0 1738 aa29.57■■■□□ 2.32
MSRB3-211ENST00000541897 QRICH2Q9H0J4 1663 aa29.56■■■□□ 2.32
MSRB3-211ENST00000541897 ST20-MTHFSA0A0A6YYL1 179 aa29.55■■■□□ 2.32
MSRB3-211ENST00000541897 SAFB2Q14151 953 aaKnown RBP eCLIP29.54■■■□□ 2.32
MSRB3-211ENST00000541897 CDC42BPGQ6DT37 1551 aa29.54■■■□□ 2.32
MSRB3-211ENST00000541897 ATF3P18847 181 aa29.53■■■□□ 2.32
MSRB3-211ENST00000541897 COL16A1Q07092 1604 aaPredicted RBP29.53■■■□□ 2.32
MSRB3-211ENST00000541897 POTEAQ6S8J7 498 aa29.52■■■□□ 2.32
MSRB3-211ENST00000541897 CADPS2Q86UW7 1296 aa29.52■■■□□ 2.32
MSRB3-211ENST00000541897 TESK2Q96S53 571 aa29.51■■■□□ 2.31
MSRB3-211ENST00000541897 JCADQ9P266 1359 aa29.51■■■□□ 2.31
MSRB3-211ENST00000541897 HSPA5P11021 654 aaKnown RBP29.5■■■□□ 2.31
MSRB3-211ENST00000541897 MINK1Q8N4C8 1332 aaPredicted RBP29.49■■■□□ 2.31
MSRB3-211ENST00000541897 WASLO00401 505 aaPredicted RBP29.46■■■□□ 2.31
MSRB3-211ENST00000541897 EVC2Q86UK5 1308 aa29.45■■■□□ 2.3
MSRB3-211ENST00000541897 HIRIP3Q9BW71 556 aaPredicted RBP29.44■■■□□ 2.3
MSRB3-211ENST00000541897 TULP4Q9NRJ4 1543 aa29.43■■■□□ 2.3
MSRB3-211ENST00000541897 AHDC1Q5TGY3 1603 aaPredicted RBP29.42■■■□□ 2.3
MSRB3-211ENST00000541897 PUS7Q96PZ0 661 aaKnown RBP29.42■■■□□ 2.3
MSRB3-211ENST00000541897 FMN2Q9NZ56 1722 aa29.42■■■□□ 2.3
MSRB3-211ENST00000541897 ANKARQ7Z5J8 1434 aa29.4■■■□□ 2.3
MSRB3-211ENST00000541897 TMF1P82094 1093 aa29.4■■■□□ 2.3
MSRB3-211ENST00000541897 BRINP3Q76B58 766 aa29.4■■■□□ 2.3
MSRB3-211ENST00000541897 MST1RQ04912 1400 aa29.39■■■□□ 2.3
MSRB3-211ENST00000541897 CDK19Q9BWU1 502 aa29.39■■■□□ 2.3
MSRB3-211ENST00000541897 LRP6O75581 1613 aa29.38■■■□□ 2.29
MSRB3-211ENST00000541897 CDCA8Q53HL2 280 aa29.36■■■□□ 2.29
MSRB3-211ENST00000541897 SHPRHQ149N8 1683 aa29.36■■■□□ 2.29
MSRB3-211ENST00000541897 SPATA31A6Q5VVP1 1343 aa29.34■■■□□ 2.29
MSRB3-211ENST00000541897 C1orf167Q5SNV9 1468 aa29.34■■■□□ 2.29
MSRB3-211ENST00000541897 SRPK2P78362 688 aaKnown RBP29.33■■■□□ 2.29
MSRB3-211ENST00000541897 ATP7BP35670 1465 aa29.33■■■□□ 2.29
MSRB3-211ENST00000541897 USP32Q8NFA0 1604 aa29.32■■■□□ 2.28
MSRB3-211ENST00000541897 ATAD2Q6PL18 1390 aa29.32■■■□□ 2.28
MSRB3-211ENST00000541897 MEX3CQ5U5Q3 659 aaKnown RBP29.31■■■□□ 2.28
MSRB3-211ENST00000541897 PRR36Q9H6K5 1346 aa29.3■■■□□ 2.28
MSRB3-211ENST00000541897 NUDT16Q96DE0 195 aaKnown RBP29.3■■■□□ 2.28
MSRB3-211ENST00000541897 CABP2Q9NPB3 220 aa29.3■■■□□ 2.28
MSRB3-211ENST00000541897 CCDC61Q9Y6R9 512 aa29.29■■■□□ 2.28
MSRB3-211ENST00000541897 NHSL1Q5SYE7 1610 aa29.29■■■□□ 2.28
MSRB3-211ENST00000541897 ITSN1Q15811 1721 aa29.26■■■□□ 2.27
MSRB3-211ENST00000541897 TOPAZ1Q8N9V7 1692 aa29.26■■■□□ 2.27
MSRB3-211ENST00000541897 NUTM2BA6NNL0 878 aaPredicted RBP29.26■■■□□ 2.27
MSRB3-211ENST00000541897 NUTM2EB1AL46 878 aaPredicted RBP29.26■■■□□ 2.27
MSRB3-211ENST00000541897 NUTM2AQ8IVF1 878 aaPredicted RBP29.26■■■□□ 2.27
MSRB3-211ENST00000541897 DDX17Q92841 729 aaKnown RBP29.26■■■□□ 2.27
MSRB3-211ENST00000541897 NINLQ9Y2I6 1382 aa29.25■■■□□ 2.27
MSRB3-211ENST00000541897 NUTM2FA1L443 756 aa29.24■■■□□ 2.27
MSRB3-211ENST00000541897 KIF1AQ12756 1690 aa29.21■■■□□ 2.27
MSRB3-211ENST00000541897 PLEKHG3A1L390 1219 aa29.21■■■□□ 2.27
MSRB3-211ENST00000541897 C11orf95C9JLR9 678 aaPredicted RBP29.21■■■□□ 2.27
MSRB3-211ENST00000541897 ESCO1Q5FWF5 840 aa29.21■■■□□ 2.27
MSRB3-211ENST00000541897 PPIP5K1Q6PFW1 1433 aa29.2■■■□□ 2.27
MSRB3-211ENST00000541897 ZNF772Q68DY9 489 aaPredicted RBP29.2■■■□□ 2.26
MSRB3-211ENST00000541897 ORAI2Q96SN7 254 aa29.2■■■□□ 2.26
MSRB3-211ENST00000541897 RGPD8O14715 1765 aaPredicted RBP29.2■■■□□ 2.26
MSRB3-211ENST00000541897 PHF8Q9UPP1 1060 aa29.19■■■□□ 2.26
MSRB3-211ENST00000541897 LRRC59Q96AG4 307 aaKnown RBP29.18■■■□□ 2.26
MSRB3-211ENST00000541897 KIF7Q2M1P5 1343 aa29.18■■■□□ 2.26
MSRB3-211ENST00000541897 POLR3AO14802 1390 aaPredicted RBP29.16■■■□□ 2.26
MSRB3-211ENST00000541897 CCDC7Q96M83 1385 aa29.15■■■□□ 2.26
MSRB3-211ENST00000541897 CABP1Q9NZU7 370 aa29.15■■■□□ 2.26
MSRB3-211ENST00000541897 WASHC2AQ641Q2 1341 aa29.14■■■□□ 2.25
MSRB3-211ENST00000541897 PNPLA6Q8IY17 1366 aa29.12■■■□□ 2.25
MSRB3-211ENST00000541897 NPHP3Q7Z494 1330 aa29.11■■■□□ 2.25
MSRB3-211ENST00000541897 MYOM1P52179 1685 aa29.11■■■□□ 2.25
MSRB3-211ENST00000541897 CPSF1Q10570 1443 aaKnown RBP29.11■■■□□ 2.25
MSRB3-211ENST00000541897 PMFBP1Q8TBY8 1022 aa29.1■■■□□ 2.25
MSRB3-211ENST00000541897 ACEP12821 1306 aa29.1■■■□□ 2.25
MSRB3-211ENST00000541897 AFF2P51816 1311 aa29.1■■■□□ 2.25
MSRB3-211ENST00000541897 TMC1Q8TDI8 760 aa29.09■■■□□ 2.25
MSRB3-211ENST00000541897 ZNF692Q9BU19 519 aaPredicted RBP29.09■■■□□ 2.25
MSRB3-211ENST00000541897 SLC12A5Q9H2X9 1139 aa29.09■■■□□ 2.25
MSRB3-211ENST00000541897 NGDNQ8NEJ9 315 aaKnown RBP29.08■■■□□ 2.25
MSRB3-211ENST00000541897 TERF2IPQ9NYB0 399 aa29.08■■■□□ 2.25
MSRB3-211ENST00000541897 BRD4O60885 1362 aaPredicted RBP29.08■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms