RNA–Protein interactions for RNA: ENST00000541841.1

CIT-211, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 4

Gene CIT, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-211ENST00000541841 NDUFV2P19404 249 aa11.37□□□□□ -0.59
CIT-211ENST00000541841 Q3C1V9 767 aa11.37□□□□□ -0.59
CIT-211ENST00000541841 MSS51Q4VC12 460 aa11.37□□□□□ -0.59
CIT-211ENST00000541841 SPIRE2Q8WWL2 714 aa11.37□□□□□ -0.59
CIT-211ENST00000541841 TNFRSF10AO00220 468 aa11.36□□□□□ -0.59
CIT-211ENST00000541841 NRG2O14511 850 aaPredicted RBP11.36□□□□□ -0.59
CIT-211ENST00000541841 MS4A1P11836 297 aa11.36□□□□□ -0.59
CIT-211ENST00000541841 ZNF598Q86UK7 904 aaKnown RBP11.36□□□□□ -0.59
CIT-211ENST00000541841 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
CIT-211ENST00000541841 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
CIT-211ENST00000541841 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
CIT-211ENST00000541841 LAPTM4AQ15012 233 aa11.35□□□□□ -0.59
CIT-211ENST00000541841 MOXD2PA6NHM9 499 aa11.33□□□□□ -0.6
CIT-211ENST00000541841 FDX1P10109 184 aa11.33□□□□□ -0.6
CIT-211ENST00000541841 MMP16P51512 607 aa11.31□□□□□ -0.6
CIT-211ENST00000541841 PDE4DQ08499 809 aa11.31□□□□□ -0.6
CIT-211ENST00000541841 FOXC1Q12948 553 aa11.31□□□□□ -0.6
CIT-211ENST00000541841 BCANQ96GW7 911 aa11.3□□□□□ -0.6
CIT-211ENST00000541841 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
CIT-211ENST00000541841 GDF9O60383 454 aa11.29□□□□□ -0.6
CIT-211ENST00000541841 DXOO77932 396 aaKnown RBP11.29□□□□□ -0.6
CIT-211ENST00000541841 CCDC24Q8N4L8 307 aa11.29□□□□□ -0.6
CIT-211ENST00000541841 TBC1D2Q9BYX2 928 aa11.29□□□□□ -0.6
CIT-211ENST00000541841 TRAF7Q6Q0C0 670 aa11.28□□□□□ -0.6
CIT-211ENST00000541841 PKD2L1Q9P0L9 805 aa11.28□□□□□ -0.6
CIT-211ENST00000541841 RPIAP49247 311 aa11.27□□□□□ -0.61
CIT-211ENST00000541841 RETREG3Q86VR2 466 aa11.26□□□□□ -0.61
CIT-211ENST00000541841 ZBTB24O43167 697 aaPredicted RBP11.25□□□□□ -0.61
CIT-211ENST00000541841 JUNDP17535 347 aa11.25□□□□□ -0.61
CIT-211ENST00000541841 PRR20EP86478 221 aa11.24□□□□□ -0.61
CIT-211ENST00000541841 PRR20CP86479 221 aa11.24□□□□□ -0.61
CIT-211ENST00000541841 PRR20DP86480 221 aa11.24□□□□□ -0.61
CIT-211ENST00000541841 PRR20BP86481 221 aa11.24□□□□□ -0.61
CIT-211ENST00000541841 PRR20AP86496 221 aa11.24□□□□□ -0.61
CIT-211ENST00000541841 PCDHB15Q9Y5E8 787 aa11.24□□□□□ -0.61
CIT-211ENST00000541841 FAM187AA6NFU0 413 aa11.23□□□□□ -0.61
CIT-211ENST00000541841 CD2BP2O95400 341 aaKnown RBP11.23□□□□□ -0.61
CIT-211ENST00000541841 TRIM32Q13049 653 aa11.22□□□□□ -0.61
CIT-211ENST00000541841 CSPP1Q1MSJ5 1256 aa11.22□□□□□ -0.61
CIT-211ENST00000541841 RSBN1LQ6PCB5 846 aaPredicted RBP11.22□□□□□ -0.61
CIT-211ENST00000541841 PKDCCQ504Y2 493 aa11.21□□□□□ -0.61
CIT-211ENST00000541841 PTCRAQ6ISU1 281 aaPredicted RBP11.2□□□□□ -0.62
CIT-211ENST00000541841 PRR7Q8TB68 274 aa11.2□□□□□ -0.62
CIT-211ENST00000541841 MTMR2Q13614 643 aa11.19□□□□□ -0.62
CIT-211ENST00000541841 NUDT12Q9BQG2 462 aa11.19□□□□□ -0.62
CIT-211ENST00000541841 CABLES1Q8TDN4 633 aa11.18□□□□□ -0.62
CIT-211ENST00000541841 GPBP1L1Q9HC44 474 aaPredicted RBP11.18□□□□□ -0.62
CIT-211ENST00000541841 SPTLC1O15269 473 aa11.17□□□□□ -0.62
CIT-211ENST00000541841 MYT1Q01538 1121 aa11.17□□□□□ -0.62
CIT-211ENST00000541841 MYSM1Q5VVJ2 828 aa11.17□□□□□ -0.62
CIT-211ENST00000541841 RIC3Q7Z5B4 369 aa11.17□□□□□ -0.62
CIT-211ENST00000541841 LIMD1Q9UGP4 676 aa11.17□□□□□ -0.62
CIT-211ENST00000541841 SKOR1P84550 965 aa11.16□□□□□ -0.62
CIT-211ENST00000541841 CFAP99D6REC4 459 aa11.15□□□□□ -0.62
CIT-211ENST00000541841 HRCP23327 699 aa11.15□□□□□ -0.62
CIT-211ENST00000541841 TOR4AQ9NXH8 423 aa11.15□□□□□ -0.62
CIT-211ENST00000541841 ST8SIA5O15466 376 aa11.14□□□□□ -0.63
CIT-211ENST00000541841 DGAT1O75907 488 aa11.14□□□□□ -0.63
CIT-211ENST00000541841 QPCTQ16769 361 aa11.14□□□□□ -0.63
CIT-211ENST00000541841 CYP4X1Q8N118 509 aa11.14□□□□□ -0.63
CIT-211ENST00000541841 CCNYL3P0C7X3 344 aa11.13□□□□□ -0.63
CIT-211ENST00000541841 DIXDC1Q155Q3 683 aa11.13□□□□□ -0.63
CIT-211ENST00000541841 MRGPRX2Q96LB1 330 aa11.13□□□□□ -0.63
CIT-211ENST00000541841 TTC24A2A3L6 582 aaPredicted RBP11.11□□□□□ -0.63
CIT-211ENST00000541841 WNT7AO00755 349 aa11.11□□□□□ -0.63
CIT-211ENST00000541841 ZBTB3Q9H5J0 574 aa11.11□□□□□ -0.63
CIT-211ENST00000541841 POLR3EQ9NVU0 708 aa11.11□□□□□ -0.63
CIT-211ENST00000541841 GJA5P36382 358 aa11.1□□□□□ -0.63
CIT-211ENST00000541841 PTPRNQ16849 979 aa11.1□□□□□ -0.63
CIT-211ENST00000541841 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
CIT-211ENST00000541841 RC3H1Q5TC82 1133 aaKnown RBP11.1□□□□□ -0.63
CIT-211ENST00000541841 TSC1Q92574 1164 aa11.1□□□□□ -0.63
CIT-211ENST00000541841 J3QL48 77 aa11.09□□□□□ -0.63
CIT-211ENST00000541841 UNC93B1Q9H1C4 597 aa11.09□□□□□ -0.63
CIT-211ENST00000541841 KDM4CQ9H3R0 1056 aa11.09□□□□□ -0.63
CIT-211ENST00000541841 SPDYE5A6NIY4 337 aa11.08□□□□□ -0.64
CIT-211ENST00000541841 POTECB2RU33 542 aa11.08□□□□□ -0.64
CIT-211ENST00000541841 EVA1BQ9NVM1 165 aa11.08□□□□□ -0.64
CIT-211ENST00000541841 NUTM2BA6NNL0 878 aaPredicted RBP11.07□□□□□ -0.64
CIT-211ENST00000541841 NUTM2EB1AL46 878 aaPredicted RBP11.07□□□□□ -0.64
CIT-211ENST00000541841 NUTM2DQ5VT03 806 aaPredicted RBP11.07□□□□□ -0.64
CIT-211ENST00000541841 NUTM2AQ8IVF1 878 aaPredicted RBP11.07□□□□□ -0.64
CIT-211ENST00000541841 FAM117AQ9C073 453 aa11.07□□□□□ -0.64
CIT-211ENST00000541841 AAASQ9NRG9 546 aa11.07□□□□□ -0.64
CIT-211ENST00000541841 PER1O15534 1290 aaPredicted RBP11.06□□□□□ -0.64
CIT-211ENST00000541841 SMPD1P17405 629 aa11.06□□□□□ -0.64
CIT-211ENST00000541841 CTHP32929 405 aa11.06□□□□□ -0.64
CIT-211ENST00000541841 CLK2P49760 499 aaKnown RBP11.06□□□□□ -0.64
CIT-211ENST00000541841 SH3BP2P78314 561 aa11.06□□□□□ -0.64
CIT-211ENST00000541841 KCNH2Q12809 1159 aa11.06□□□□□ -0.64
CIT-211ENST00000541841 RTL5Q5HYW3 569 aaPredicted RBP11.06□□□□□ -0.64
CIT-211ENST00000541841 ZNF787Q6DD87 383 aa11.06□□□□□ -0.64
CIT-211ENST00000541841 SNIP1Q8TAD8 396 aaKnown RBP11.06□□□□□ -0.64
CIT-211ENST00000541841 BAP1Q92560 729 aa11.06□□□□□ -0.64
CIT-211ENST00000541841 MAP10Q9P2G4 905 aa11.06□□□□□ -0.64
CIT-211ENST00000541841 DACH1Q9UI36 760 aa11.06□□□□□ -0.64
CIT-211ENST00000541841 WNT7BP56706 349 aa11.05□□□□□ -0.64
CIT-211ENST00000541841 PRPF38BQ5VTL8 546 aaKnown RBP11.05□□□□□ -0.64
CIT-211ENST00000541841 DESI1Q6ICB0 168 aa11.05□□□□□ -0.64
CIT-211ENST00000541841 LYPD8Q6UX82 237 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms